Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038706 Camellia sinensis var. sinensis HOM05D068293 ORTHO05D006851 1.0e-67 260.0 133 100.0
CSS0021487 Camellia sinensis var. sinensis HOM05D068293 ORTHO05D006851 2.0e-47 192.6 133 78.2
CSS0032413 Camellia sinensis var. sinensis HOM05D005769 ORTHO05D006851 1.5e-23 113.2 64 89.1
Actinidia09713 Actinidia chinensis HOM05D005769 ORTHO05D006851 2.3e-11 72.8 79 59.5
Haze_09647 Corylus avellana HOM05D005769 ORTHO05D006851 2.3e-08 62.8 73 54.8
Phvul.008G265600 Phaseolus vulgaris HOM05D005769 ORTHO05D006851 5.2e-08 61.6 123 39.0
QL08p012043 Quercus lobata HOM05D005769 ORTHO05D006851 6.8e-08 61.2 104 41.3
Cfa020385 Carpinus fangiana HOM05D005769 ORTHO05D006851 1.2e-07 60.5 73 53.4
COL.COLO4_09632 Corchorus olitorius HOM05D005769 ORTHO05D006851 1.2e-07 60.5 71 57.7
Nn1g03582 Nelumbo nucifera HOM05D005769 ORTHO05D006851 2.0e-07 59.7 74 52.7
Manes.03G126700 Manihot esculenta HOM05D005769 ORTHO05D006851 2.6e-07 59.3 139 36.0
QL08p011874 Quercus lobata HOM05D005769 ORTHO05D006851 3.4e-07 58.9 104 40.4
VMungo0647G1996 Vigna mungo HOM05D005769 ORTHO05D006851 5.8e-07 58.2 60 55.0
CiPaw.11G187200 Carya illinoinensis HOM05D005769 ORTHO05D006851 1.3e-06 57.0 73 50.7
Lalb_Chr04g0248581 Lupinus albus HOM05D005769 ORTHO05D006851 2.2e-06 56.2 97 38.1
RcHm_v2.0_Chr5g0038281 Rosa chinensis HOM05D005769 ORTHO05D006851 3.7e-06 55.5 72 50.0
Thecc.07G043800 Theobroma cacao HOM05D005769 ORTHO05D006851 8.3e-06 54.3 71 50.7


User provided reference genes

Program Settings