Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038691 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 6.7e-95 351.3 272 100.0
CSS0041689 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 9.8e-78 294.3 156 92.3
CSS0045249 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 3.1e-76 289.3 156 89.7
CSS0023448 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 2.3e-66 256.5 155 80.0
CSS0043933 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 2.0e-51 206.8 160 63.1
CSS0017543 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 1.1e-49 201.1 156 62.8
CSS0019933 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 6.2e-48 195.3 148 65.5
CSS0020511 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 2.6e-46 189.9 159 60.4
CSS0021727 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 1.2e-43 181.0 156 62.2
CSS0044261 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 7.8e-43 178.3 163 59.5
CSS0024032 Camellia sinensis var. sinensis HOM05D000522 ORTHO05D000565 5.1e-42 175.6 163 59.5
CSS0017779 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 1.5e-25 120.9 96 57.3
vmacro21029 Vaccinium macrocarpon HOM05D001320 ORTHO05D002136 2.7e-11 73.6 114 36.8
FAN25G3366 Fragaria x ananassa HOM05D016656 ORTHO05D015012 1.5e-09 67.8 118 35.6
FvH4_3g26742 Fragaria vesca HOM05D016656 ORTHO05D003639 4.3e-09 66.2 118 35.6
RcHm_v2.0_Chr2g0142701 Rosa chinensis HOM05D008702 ORTHO05D003639 8.1e-08 62.0 99 33.3
Nitab4.5_0000663g0010 Nicotiana tabacum HOM05D008778 ORTHO05D003639 2.4e-07 60.5 107 35.5
Nitab4.5_0001698g0040 Nicotiana tabacum HOM05D008778 ORTHO05D003639 2.4e-07 60.5 107 34.6
Sopen09g003890 Solanum pennellii HOM05D000006 ORTHO05D000001 2.4e-07 60.5 129 30.2
FAN21G3222 Fragaria x ananassa HOM05D016656 ORTHO05D015012 3.1e-07 60.1 117 35.0
Nitab4.5_0006587g0010 Nicotiana tabacum HOM05D008778 ORTHO05D003639 3.1e-07 60.1 103 29.1
Peaxi162Scf00169g01112 Petunia axillaris HOM05D008778 ORTHO05D003639 3.1e-07 60.1 107 32.7
CSS0044889 Camellia sinensis var. sinensis HOM05D008778 ORTHO05D003639 5.3e-07 59.3 155 31.6
vmacro08872 Vaccinium macrocarpon HOM05D000177 ORTHO05D004733 5.3e-07 59.3 111 34.2
RcHm_v2.0_Chr5g0049171 Rosa chinensis HOM05D016656 ORTHO05D003639 6.9e-07 58.9 107 37.4
CSS0041949 Camellia sinensis var. sinensis HOM05D012914 ORTHO05D003639 1.2e-06 58.2 166 31.3
PGSC0003DMG400002681 Solanum tuberosum HOM05D008778 ORTHO05D003639 1.5e-06 57.8 109 30.3
Nitab4.5_0001698g0060 Nicotiana tabacum HOM05D008778 ORTHO05D003639 2.0e-06 57.4 103 28.2
Solyc05g010817.1 Solanum lycopersicum HOM05D008778 ORTHO05D003639 2.0e-06 57.4 103 31.1
Sopen00g002430 Solanum pennellii HOM05D008778 ORTHO05D003639 2.6e-06 57.0 103 31.1
Sopen00g007290 Solanum pennellii HOM05D008778 ORTHO05D003639 2.6e-06 57.0 103 31.1
Sopen09g003880 Solanum pennellii HOM05D008778 ORTHO05D003639 2.6e-06 57.0 106 35.8
CSS0022979 Camellia sinensis var. sinensis HOM05D012914 ORTHO05D003639 1.0e-05 55.1 158 28.5


User provided reference genes

Program Settings