Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038668 Camellia sinensis var. sinensis HOM05D014000 ORTHO05D006717 4.5e-138 494.6 251 100.0
CSS0036791 Camellia sinensis var. sinensis HOM05D014000 ORTHO05D111371 4.0e-41 172.6 105 81.9
CSS0034700 Camellia sinensis var. sinensis HOM05D014000 ORTHO05D111100 1.5e-40 170.6 105 82.9
CSS0015972 Camellia sinensis var. sinensis HOM05D014000 ORTHO05D111402 1.6e-37 160.6 105 79.0
CSS0031582 Camellia sinensis var. sinensis HOM05D014000 ORTHO05D113532 6.5e-36 155.2 105 76.2
CSS0010025 Camellia sinensis var. sinensis HOM05D014000 ORTHO05D113467 1.6e-34 150.6 105 75.2
CSS0024430 Camellia sinensis var. sinensis HOM05D014000 ORTHO05D110124 2.6e-32 143.3 86 83.7
CSS0041230 Camellia sinensis var. sinensis HOM05D014000 ORTHO05D112109 3.4e-32 142.9 105 72.4
CSS0033175 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 9.8e-32 141.4 97 78.4
CSS0045388 Camellia sinensis var. sinensis HOM05D014000 ORTHO05D110508 1.7e-23 114.0 105 61.9
CSS0042036 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.2e-23 113.6 93 65.6
Actinidia02494 Actinidia chinensis HOM05D005890 ORTHO05D006717 1.5e-19 100.9 65 83.1
CSS0015860 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 5.6e-19 99.0 69 75.4
CSS0013217 Camellia sinensis var. sinensis HOM05D014000 ORTHO05D111845 1.8e-17 94.0 86 64.0
CSS0000254 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.0e-17 93.2 86 58.1
Rhsim01G0114500 Rhododendron simsii HOM05D005890 ORTHO05D006717 2.6e-16 90.1 80 63.8
CSS0011781 Camellia sinensis var. sinensis HOM05D001028 ORTHO05D000827 3.4e-16 89.7 102 52.9
CSS0013843 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.7e-15 87.4 84 54.8
CSS0000722 Camellia sinensis var. sinensis HOM05D014000 ORTHO05D110887 4.9e-15 85.9 84 60.7
CSS0008798 Camellia sinensis var. sinensis HOM05D001028 ORTHO05D000827 8.3e-15 85.1 103 47.6
CSS0047664 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.4e-14 84.3 79 60.8
Dinv41195 Davidia involucrata HOM05D005890 ORTHO05D006717 5.4e-14 82.4 80 58.8
CSS0049213 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.7e-13 80.1 84 56.0
CSS0026732 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.7e-12 77.4 72 54.2
CSS0009923 Camellia sinensis var. sinensis HOM05D006495 ORTHO05D109464 1.5e-11 74.3 127 44.1
vmacro20806 Vaccinium macrocarpon HOM05D005890 ORTHO05D006717 3.3e-11 73.2 47 76.6
Dinv25461 Davidia involucrata HOM05D005890 ORTHO05D006717 2.3e-09 67.0 73 56.2
CSS0040975 Camellia sinensis var. sinensis HOM05D001028 ORTHO05D000827 3.1e-09 66.6 98 43.9
CSS0033048 Camellia sinensis var. sinensis HOM05D001028 ORTHO05D000827 4.0e-09 66.2 90 47.8
Hma1.2p1_0235F.1_g098760 Hydrangea macrophylla HOM05D005890 ORTHO05D006717 1.2e-08 64.7 67 56.7
CsaV3_3G012070 Cucumis sativus L. HOM05D005890 ORTHO05D006717 4.9e-07 59.3 70 48.6
Cc03_g15250 Coffea canephora HOM05D005890 ORTHO05D006717 6.4e-07 58.9 90 43.3
TWI32G1283 Tripterygium wilfordii HOM05D005890 ORTHO05D006717 8.3e-07 58.5 66 56.1
Aa31LG3G13020 Aethionema arabicum HOM05D005890 ORTHO05D006717 1.1e-06 58.2 66 48.5
CSS0008971 Camellia sinensis var. sinensis HOM05D001028 ORTHO05D000827 1.1e-06 58.2 106 38.7
CSS0038222 Camellia sinensis var. sinensis HOM05D001028 ORTHO05D000827 1.4e-06 57.8 102 41.2
MD13G1240600 Malus domestica HOM05D005890 ORTHO05D006717 1.4e-06 57.8 68 54.4
CSS0017123 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.9e-06 57.4 38 71.1
CiPaw.08G031700 Carya illinoinensis HOM05D005890 ORTHO05D006717 2.4e-06 57.0 68 48.5
ClCG06G013720 Citrullus lanatus HOM05D005890 ORTHO05D006717 4.1e-06 56.2 67 49.3
MELO3C006422.2 Cucumis melo HOM05D005890 ORTHO05D006717 4.1e-06 56.2 79 41.8
Lalb_Chr13g0299851 Lupinus albus HOM05D005890 ORTHO05D006717 7.0e-06 55.5 66 50.0
MSTRG.26556 Avicennia marina HOM05D005890 ORTHO05D006717 9.2e-06 55.1 84 44.0
Thecc.09G191500 Theobroma cacao HOM05D005890 ORTHO05D006717 9.2e-06 55.1 66 51.5


User provided reference genes

Program Settings