Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016721 Camellia sinensis var. sinensis HOM05D037884 ORTHO05D005895 3.4e-179 631.7 356 100.0
CSS0038644 Camellia sinensis var. sinensis HOM05D037884 ORTHO05D005895 3.4e-179 631.7 356 100.0
CSS0027095 Camellia sinensis var. sinensis HOM05D037884 ORTHO05D005895 3.8e-154 548.5 360 89.4
Actinidia25244 Actinidia chinensis HOM05D006920 ORTHO05D005895 1.5e-70 270.8 360 55.8
Rhsim05G0018400 Rhododendron simsii HOM05D006920 ORTHO05D005895 5.2e-47 192.6 368 46.2
vmacro17256 Vaccinium macrocarpon HOM05D006920 ORTHO05D005895 2.5e-41 173.7 394 43.1
Dinv36779 Davidia involucrata HOM05D006920 ORTHO05D005895 3.6e-40 169.9 280 44.3
GSVIVG01015184001 Vitis vinifera HOM05D006920 ORTHO05D005895 5.8e-38 162.5 397 38.3
Hma1.2p1_0169F.1_g074930 Hydrangea macrophylla HOM05D006920 ORTHO05D005895 3.5e-35 153.3 367 43.9
Haze_25928 Corylus avellana HOM05D006920 ORTHO05D005895 1.2e-30 138.3 395 34.9
Cfa003067 Carpinus fangiana HOM05D006920 ORTHO05D005895 3.8e-29 133.3 387 34.6
QL02p062309 Quercus lobata HOM05D006920 ORTHO05D005895 8.4e-29 132.1 392 34.4
Dinv42334 Davidia involucrata HOM05D006920 ORTHO05D005895 4.2e-28 129.8 242 40.9
DCAR_031337 Daucus carota HOM05D006920 ORTHO05D005895 5.1e-26 122.9 390 33.8
DCAR_015050 Daucus carota HOM05D006920 ORTHO05D005895 8.1e-24 115.5 389 31.6
Oeu064585.1 Olea europaea HOM05D006920 ORTHO05D005895 2.6e-22 110.5 368 32.3
Cc06_g11560 Coffea canephora HOM05D006920 ORTHO05D005895 5.8e-22 109.4 347 32.0
TAR383G0297 Trochodendron aralioides HOM05D006920 ORTHO05D005895 4.2e-20 103.2 303 35.0
Hma1.2p1_0476F.1_g160830 Hydrangea macrophylla HOM05D006920 ORTHO05D005895 2.7e-19 100.5 210 39.5
Ciclev10007413m.g Citrus clementina HOM05D006920 ORTHO05D005895 1.3e-18 98.2 309 32.7
Atru.chr7.1617 Acer truncatum HOM05D006920 ORTHO05D005895 4.8e-16 89.7 397 33.0
Potri.006G148400 Populus trichocarpa HOM05D006920 ORTHO05D005895 6.9e-15 85.9 391 29.4
Sabra06G0117400 Salix brachista HOM05D006920 ORTHO05D005895 1.5e-14 84.7 392 29.6
CANSAT56G3092 Cannabis sativa HOM05D006920 ORTHO05D005895 7.6e-14 82.4 380 28.9
Oeu000320.3 Olea europaea HOM05D006920 ORTHO05D005895 1.1e-12 78.6 355 29.0
Manes.01G178200 Manihot esculenta HOM05D006920 ORTHO05D005895 1.6e-11 74.7 329 28.6
Sed0019505 Sechium edule HOM05D006920 ORTHO05D005895 9.6e-09 65.5 375 29.3
Duzib150G1610 Durio zibethinus HOM05D006920 ORTHO05D005895 2.8e-08 63.9 303 28.1
Peaxi162Scf00028g00415 Petunia axillaris HOM05D006920 ORTHO05D005895 8.2e-08 62.4 362 29.0
SalBow6G1737 Salvia bowleyana HOM05D006920 ORTHO05D005895 1.1e-07 62.0 284 29.6
TWI63G0676 Tripterygium wilfordii HOM05D006920 ORTHO05D005895 2.4e-07 60.8 87 42.5
RcHm_v2.0_Chr3g0459471 Rosa chinensis HOM05D006920 ORTHO05D005895 9.0e-07 58.9 324 26.2


User provided reference genes

Program Settings