Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038628 Camellia sinensis var. sinensis HOM05D017996 ORTHO05D017165 2.2e-100 369.0 188 100.0
CSS0030355 Camellia sinensis var. sinensis HOM05D017996 ORTHO05D017165 1.8e-99 365.9 188 99.5
CSS0006956 Camellia sinensis var. sinensis HOM05D017996 ORTHO05D017165 4.7e-87 324.7 188 91.0
CSS0018747 Camellia sinensis var. sinensis HOM05D017996 ORTHO05D017165 4.7e-87 324.7 188 91.0
vmacro12771 Vaccinium macrocarpon HOM05D017996 ORTHO05D017165 6.4e-28 128.3 183 49.2
Actinidia06596 Actinidia chinensis HOM05D010873 ORTHO05D013124 4.1e-27 125.6 166 46.4
Rhsim10G0129700 Rhododendron simsii HOM05D017996 ORTHO05D017165 8.6e-25 117.9 166 48.2
Sabra07G0081700 Salix brachista HOM05D012218 ORTHO05D017165 3.5e-18 95.9 134 45.5
Potri.007G098300 Populus trichocarpa HOM05D012218 ORTHO05D017165 3.0e-17 92.8 160 41.9
Cfa001988 Carpinus fangiana HOM05D012473 ORTHO05D010844 4.5e-13 79.0 135 39.3
TAR381G1694 Trochodendron aralioides HOM05D012218 ORTHO05D010844 9.9e-13 77.8 147 38.8
CiPaw.03G115200 Carya illinoinensis HOM05D012218 ORTHO05D010844 1.7e-12 77.0 178 34.3
QL02p071969 Quercus lobata HOM05D012473 ORTHO05D010844 4.9e-12 75.5 159 38.4
Haze_16528 Corylus avellana HOM05D012473 ORTHO05D010844 1.9e-11 73.6 135 36.3
FAN28G1165 Fragaria x ananassa HOM05D012473 ORTHO05D010844 2.4e-11 73.2 156 34.0
Dinv07458 Davidia involucrata HOM05D010873 ORTHO05D013124 3.2e-11 72.8 108 47.2
FAN23G1528 Fragaria x ananassa HOM05D012473 ORTHO05D010844 9.3e-11 71.2 156 34.0
FAN26G1572 Fragaria x ananassa HOM05D012473 ORTHO05D010844 2.1e-10 70.1 141 34.0
Nitab4.5_0000350g0130 Nicotiana tabacum HOM05D010873 ORTHO05D013124 2.3e-09 66.6 169 34.3
Thecc.01G142200 Theobroma cacao HOM05D012218 ORTHO05D010844 1.1e-08 64.3 149 32.9
QL10p005044 Quercus lobata HOM05D012473 ORTHO05D010844 1.5e-08 63.9 184 32.1
Atru.chr6.1276 Acer truncatum HOM05D017996 ORTHO05D017165 3.7e-07 59.3 144 37.5
Sopen05g004330 Solanum pennellii HOM05D010873 ORTHO05D013124 4.8e-07 58.9 166 31.9
CAN.G1489.12 Capsicum annuum HOM05D010873 ORTHO05D013124 6.2e-07 58.5 165 32.7
Solyc05g008490.2 Solanum lycopersicum HOM05D010873 ORTHO05D013124 4.0e-06 55.8 166 30.7


User provided reference genes

Program Settings