Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038626 Camellia sinensis var. sinensis HOM05D001551 ORTHO05D005859 4.3e-77 291.2 140 100.0
Hma1.2p1_0577F.1_g182180 Hydrangea macrophylla HOM05D001551 ORTHO05D005859 1.3e-38 163.3 106 74.5
Dinv13710 Davidia involucrata HOM05D001551 ORTHO05D005859 2.3e-38 162.5 104 75.0
CSS0002484 Camellia sinensis var. sinensis HOM05D001551 ORTHO05D005859 1.9e-37 159.5 104 76.9
CSS0038575 Camellia sinensis var. sinensis HOM05D001551 ORTHO05D005859 1.9e-37 159.5 104 76.9
TAR629G2635 Trochodendron aralioides HOM05D001551 ORTHO05D005859 2.5e-37 159.1 105 77.1
Thecc.03G141800 Theobroma cacao HOM05D001551 ORTHO05D005859 9.6e-37 157.1 105 76.2
QL10p000300 Quercus lobata HOM05D001551 ORTHO05D005859 1.6e-36 156.4 105 75.2
Rhsim08G0198700 Rhododendron simsii HOM05D001551 ORTHO05D005859 1.6e-36 156.4 103 75.7
Lj9C488G12 Lonicera japonica HOM05D001551 ORTHO05D005859 4.8e-36 154.8 106 68.9
Actinidia36846 Actinidia chinensis HOM05D001551 ORTHO05D005859 6.2e-36 154.5 103 72.8
Actinidia18288 Actinidia chinensis HOM05D001551 ORTHO05D005859 1.8e-35 152.9 104 71.2
Gohir.D11G042000 Gossypium hirsutum HOM05D001551 ORTHO05D005859 1.8e-35 152.9 107 72.0
Cfa018698 Carpinus fangiana HOM05D001551 ORTHO05D005859 2.4e-35 152.5 105 72.4
Gorai.007G045200 Gossypium raimondii HOM05D001551 ORTHO05D005859 2.4e-35 152.5 108 71.3
Cc04_g05770 Coffea canephora HOM05D001551 ORTHO05D005859 4.0e-35 151.8 104 69.2
vmacro16761 Vaccinium macrocarpon HOM05D001551 ORTHO05D005859 4.0e-35 151.8 110 69.1
DCAR_025640 Daucus carota HOM05D001551 ORTHO05D005859 5.3e-35 151.4 104 70.2
Lsat_1_v5_gn_5_9381 Lactuca sativa HOM05D001551 ORTHO05D005859 9.0e-35 150.6 112 67.0
Rhsim12G0181300 Rhododendron simsii HOM05D001551 ORTHO05D005859 9.0e-35 150.6 106 70.8
TAR371G0091 Trochodendron aralioides HOM05D001551 ORTHO05D005859 9.0e-35 150.6 104 76.0
Duzib084G0881 Durio zibethinus HOM05D001551 ORTHO05D005859 1.2e-34 150.2 105 73.3
Lj1g0018460 Lotus japonicus HOM05D001551 ORTHO05D005859 1.2e-34 150.2 105 72.4
Medtr3g098510 Medicago truncatula HOM05D001551 ORTHO05D005859 1.2e-34 150.2 105 71.4
Phvul.009G160500 Phaseolus vulgaris HOM05D001551 ORTHO05D005859 1.2e-34 150.2 105 70.5
Glyma.04G202400 Glycine max HOM05D001551 ORTHO05D005859 1.5e-34 149.8 105 71.4
Gohir.A11G038800 Gossypium hirsutum HOM05D001551 ORTHO05D005859 1.5e-34 149.8 107 71.0
Solyc06g068760.3 Solanum lycopersicum HOM05D001551 ORTHO05D005859 1.5e-34 149.8 104 71.2
Cfa018920 Carpinus fangiana HOM05D001551 ORTHO05D005859 2.0e-34 149.4 105 71.4
Cpa.g.sc2215.3 Carica papaya HOM05D001551 ORTHO05D005859 2.6e-34 149.1 105 71.4
COL.COLO4_37269 Corchorus olitorius HOM05D001551 ORTHO05D005859 2.6e-34 149.1 105 72.4
Actinidia08913 Actinidia chinensis HOM05D001551 ORTHO05D005859 3.4e-34 148.7 104 68.3
Ca_10874_v3 Cicer arietinum L. HOM05D001551 ORTHO05D005859 3.4e-34 148.7 105 71.4
Manes.06G127400 Manihot esculenta HOM05D001551 ORTHO05D005859 3.4e-34 148.7 105 71.4
Migut.I00664 Erythranthe guttata HOM05D001551 ORTHO05D005859 4.5e-34 148.3 104 70.2
Glyma.06G163100 Glycine max HOM05D001551 ORTHO05D005859 4.5e-34 148.3 105 69.5
GSVIVG01008663001 Vitis vinifera HOM05D001551 ORTHO05D005859 4.5e-34 148.3 105 72.4
CAN.G1089.16 Capsicum annuum HOM05D001551 ORTHO05D005859 7.6e-34 147.5 105 72.4
MSTRG.22814 Avicennia marina HOM05D001551 ORTHO05D005859 9.9e-34 147.1 104 68.3
Potri.012G109800 Populus trichocarpa HOM05D001551 ORTHO05D005859 1.3e-33 146.7 105 70.5
Haze_07088 Corylus avellana HOM05D001551 ORTHO05D005859 1.7e-33 146.4 107 69.2
arahy.Tifrunner.gnm1.ann1.D8JD58 Arachis hypogaea HOM05D001551 ORTHO05D005859 2.2e-33 146.0 105 68.6
arahy.Tifrunner.gnm1.ann1.Q2CTBB Arachis hypogaea HOM05D001551 ORTHO05D005859 2.2e-33 146.0 105 68.6
Peaxi162Scf00207g00254 Petunia axillaris HOM05D001551 ORTHO05D005859 2.2e-33 146.0 105 72.4
Haze_07303 Corylus avellana HOM05D006543 ORTHO05D008308 2.9e-33 145.6 106 70.8
Duzib205G1491 Durio zibethinus HOM05D001551 ORTHO05D005859 2.9e-33 145.6 105 71.4
SGA_v2.0_scaffold5G02806 Striga asiatica HOM05D001551 ORTHO05D005859 2.9e-33 145.6 105 66.7
Sopen06g026040 Solanum pennellii HOM05D001551 ORTHO05D005859 3.8e-33 145.2 105 70.5
PGSC0003DMG400025575 Solanum tuberosum HOM05D001551 ORTHO05D005859 3.8e-33 145.2 105 70.5
Manes.14G043800 Manihot esculenta HOM05D001551 ORTHO05D005859 4.9e-33 144.8 105 69.5
Sabra12G0080000 Salix brachista HOM05D001551 ORTHO05D005859 4.9e-33 144.8 105 69.5
Atru.chr6.1937 Acer truncatum HOM05D001551 ORTHO05D005859 6.4e-33 144.4 105 72.4
TPR.G16934 Trifolium pratense HOM05D001551 ORTHO05D005859 6.4e-33 144.4 105 68.6
MELO3C002387.2 Cucumis melo HOM05D001551 ORTHO05D005859 8.4e-33 144.1 105 65.7
PSO017G1738 Papaver somniferum HOM05D001551 ORTHO05D005859 8.4e-33 144.1 105 69.5
PSO478G5149 Papaver somniferum HOM05D001551 ORTHO05D005859 8.4e-33 144.1 105 69.5
SalBow7G1162 Salvia bowleyana HOM05D001551 ORTHO05D005859 8.4e-33 144.1 104 69.2
Nn4g22121 Nelumbo nucifera HOM05D001551 ORTHO05D005859 1.4e-32 143.3 106 67.9
CsaV3_1G009930 Cucumis sativus L. HOM05D001551 ORTHO05D005859 3.2e-32 142.1 105 64.8
Sed0027340 Sechium edule HOM05D001551 ORTHO05D005859 4.2e-32 141.7 104 63.5
Prupe.5G140300 Prunus persica HOM05D001551 ORTHO05D005859 5.4e-32 141.4 105 69.5
HanXRQChr05g0155371 Helianthus annuus HOM05D001551 ORTHO05D005859 9.3e-32 140.6 110 65.5
Ciclev10032408m.g Citrus clementina HOM05D001551 ORTHO05D005859 1.6e-31 139.8 106 67.9
RcHm_v2.0_Chr7g0188531 Rosa chinensis HOM05D001551 ORTHO05D005859 2.1e-31 139.4 105 66.7
CiPaw.12G000400 Carya illinoinensis HOM05D001551 ORTHO05D005859 2.7e-31 139.0 109 65.1
Oeu051186.2 Olea europaea HOM05D001551 ORTHO05D005859 2.7e-31 139.0 92 72.8
Aqoxy5G03068 Aquilegia oxysepala HOM05D001551 ORTHO05D005859 3.5e-31 138.7 107 64.5
Nitab4.5_0007345g0100 Nicotiana tabacum HOM05D001551 ORTHO05D005859 6.0e-31 137.9 105 68.6
AUR62043863 Chenopodium quinoa HOM05D001551 ORTHO05D005859 7.9e-31 137.5 107 64.5
Nitab4.5_0012775g0030 Nicotiana tabacum HOM05D001551 ORTHO05D005859 7.9e-31 137.5 105 68.6
vmacro19115 Vaccinium macrocarpon HOM05D001551 ORTHO05D005859 1.0e-30 137.1 102 67.6
Gohir.A03G055800 Gossypium hirsutum HOM05D001551 ORTHO05D005859 1.3e-30 136.7 105 68.6
FvH4_5g09710 Fragaria vesca HOM05D001551 ORTHO05D005859 1.8e-30 136.3 105 65.7
FAN04G0171 Fragaria x ananassa HOM05D001551 ORTHO05D005859 1.8e-30 136.3 105 65.7
FAN18G2118 Fragaria x ananassa HOM05D001551 ORTHO05D005859 1.8e-30 136.3 105 65.7
Gorai.003G117100 Gossypium raimondii HOM05D001551 ORTHO05D005859 1.8e-30 136.3 105 68.6
Os11g0524300 Oryza sativa ssp. japonica HOM05D001551 ORTHO05D005859 1.8e-30 136.3 105 63.8
AUR62032208 Chenopodium quinoa HOM05D001551 ORTHO05D005859 2.3e-30 136.0 107 64.5
Lalb_Chr08g0237601 Lupinus albus HOM05D001551 ORTHO05D005859 2.3e-30 136.0 105 63.8
TWI23G1313 Tripterygium wilfordii HOM05D001551 ORTHO05D005859 2.3e-30 136.0 108 65.7
EL10Ac5g11272 Beta vulgaris HOM05D001551 ORTHO05D005859 3.0e-30 135.6 107 62.6
FAN08G3006 Fragaria x ananassa HOM05D001551 ORTHO05D005859 3.0e-30 135.6 105 64.8
MD06G1129000 Malus domestica HOM05D001551 ORTHO05D005859 3.0e-30 135.6 105 66.7
AUR62011939 Chenopodium quinoa HOM05D001551 ORTHO05D005859 3.9e-30 135.2 105 65.7
AUR62043378 Chenopodium quinoa HOM05D001551 ORTHO05D005859 3.9e-30 135.2 107 63.6
FAN13G0525 Fragaria x ananassa HOM05D001551 ORTHO05D005859 3.9e-30 135.2 105 64.8
MD14G1145900 Malus domestica HOM05D001551 ORTHO05D005859 3.9e-30 135.2 105 66.7
Psat5g055440 Pisum sativum HOM05D001551 ORTHO05D005859 5.1e-30 134.8 105 64.8
unitig_27.g25103 Utricularia gibba HOM05D001551 ORTHO05D005859 2.5e-29 132.5 104 62.5
Hund10026 Selenicereus undatus HOM05D001551 ORTHO05D005859 3.3e-29 132.1 105 64.8
Sc04g0000180 Simmondsia chinensis HOM05D001551 ORTHO05D005859 3.3e-29 132.1 105 65.7
Sc04g0000140 Simmondsia chinensis HOM05D001551 ORTHO05D005859 4.3e-29 131.7 106 65.1
Eucgr.K02189 Eucalyptus grandis HOM05D001551 ORTHO05D005859 5.6e-29 131.3 107 63.6
PGR044G0460 Punica granatum HOM05D001551 ORTHO05D005859 9.6e-29 130.6 106 64.2
THA.LOC104808046 Tarenaya hassleriana HOM05D001551 ORTHO05D005859 9.6e-29 130.6 99 66.7
Zm00001eb170550 Zea mays HOM05D001551 ORTHO05D005859 1.3e-28 130.2 106 59.4
Nn3g16260 Nelumbo nucifera HOM05D001551 ORTHO05D005859 1.6e-28 129.8 67 86.6
Sed0019000 Sechium edule HOM05D001551 ORTHO05D005859 2.1e-28 129.4 103 61.2
BcaC09g50811 Brassica carinata HOM05D001551 ORTHO05D005859 8.1e-28 127.5 107 62.6
A01p16340 Brassica napus HOM05D001551 ORTHO05D005859 8.1e-28 127.5 107 62.6
BraA01t01589Z Brassica rapa HOM05D001551 ORTHO05D005859 1.1e-27 127.1 107 62.6
BcaNung03998 Brassica carinata HOM05D001551 ORTHO05D005859 1.4e-27 126.7 107 62.6
CDE02G1325 Ceratophyllum demersum HOM05D001551 ORTHO05D005859 1.4e-27 126.7 105 61.0
C01p20490 Brassica napus HOM05D001551 ORTHO05D005859 1.8e-27 126.3 107 61.7
BolC1t01980H Brassica oleracea HOM05D001551 ORTHO05D005859 1.8e-27 126.3 107 61.7
SGA_v2.0_scaffold37G14673 Striga asiatica HOM05D001551 ORTHO05D005859 9.0e-27 124.0 73 75.3
TWI39G0428 Tripterygium wilfordii HOM05D001551 ORTHO05D005859 9.0e-27 124.0 107 61.7
MBI07_g13940_MAGBIO Magnolia biondii HOM05D001551 ORTHO05D005859 1.5e-26 123.2 125 56.0
MBI07_g35983_MAGBIO Magnolia biondii HOM05D001551 ORTHO05D005859 3.4e-26 122.1 111 60.4
ClCG03G004050 Citrullus lanatus HOM05D001551 ORTHO05D005859 5.8e-26 121.3 66 77.3
Sp7g23070 Schrenkiella parvula HOM05D001551 ORTHO05D005859 5.8e-26 121.3 107 57.9
Hund02515 Selenicereus undatus HOM05D001551 ORTHO05D005859 1.7e-25 119.8 67 82.1
MBI07_g48061_MAGBIO Magnolia biondii HOM05D001551 ORTHO05D005859 6.4e-25 117.9 67 80.6
THA.LOC104811554 Tarenaya hassleriana HOM05D001551 ORTHO05D005859 6.4e-25 117.9 67 79.1
Gohir.D03G110700 Gossypium hirsutum HOM05D001551 ORTHO05D005859 1.4e-24 116.7 85 71.8
Sp6g13170 Schrenkiella parvula HOM05D001551 ORTHO05D005859 1.4e-24 116.7 93 63.4
AL8G25230 Arabidopsis lyrata HOM05D001551 ORTHO05D005859 4.2e-24 115.2 109 56.9
AT5G51020 Arabidopsis thaliana HOM05D001551 ORTHO05D005859 4.2e-24 115.2 109 56.9
BcaC01g06112 Brassica carinata HOM05D001551 ORTHO05D005859 4.2e-24 115.2 109 55.0
CARHR257170 Cardamine hirsuta HOM05D001551 ORTHO05D005859 4.2e-24 115.2 109 56.9
Actinidia25511 Actinidia chinensis HOM05D001551 ORTHO05D005859 1.2e-23 113.6 85 65.9
Carub.0008s1102 Capsella rubella HOM05D001551 ORTHO05D005859 2.1e-23 112.8 109 55.0
AagrBONN_evm.TU.Sc2ySwM_368.1985 Anthoceros agrestis HOM05D001551 ORTHO05D005859 4.6e-23 111.7 67 71.6
HPP92_009738 Vanilla planifolia HOM05D001551 ORTHO05D005859 4.6e-23 111.7 109 54.1
Thhalv10014437m.g Eutrema salsugineum HOM05D001551 ORTHO05D005859 6.0e-23 111.3 67 74.6
Pp3c5_10130 Physcomitrium patens HOM05D001551 ORTHO05D005859 7.9e-23 110.9 69 66.7
SEGI_34423 Sequoiadendron giganteum HOM05D001551 ORTHO05D005859 1.0e-22 110.5 69 66.7
Mapoly0002s0145 Marchantia polymorpha HOM05D001551 ORTHO05D005859 1.3e-22 110.2 67 70.1
BraA03t10931Z Brassica rapa HOM05D001551 ORTHO05D005859 1.8e-22 109.8 67 73.1
Pp3c6_23000 Physcomitrium patens HOM05D001551 ORTHO05D005859 3.0e-22 109.0 69 66.7
A03p16410 Brassica napus HOM05D001551 ORTHO05D005859 5.1e-22 108.2 67 73.1
Aa31LG3G7480 Aethionema arabicum HOM05D001551 ORTHO05D005859 2.5e-21 105.9 93 59.1
SMO118G0459 Selaginella moellendorffii HOM05D001551 ORTHO05D005859 3.3e-21 105.5 67 67.2
CBR_g30803 Chara braunii HOM05D001551 ORTHO05D005859 2.4e-19 99.4 68 60.3
SEGI_13041 Sequoiadendron giganteum HOM05D001551 ORTHO05D005859 2.5e-13 79.3 48 68.8
C03p19300 Brassica napus HOM05D001551 ORTHO05D042173 7.4e-13 77.8 87 44.8
Sabra15G0128500 Salix brachista HOM05D001551 ORTHO05D003058 1.1e-08 63.9 75 50.7
CDE06G0746 Ceratophyllum demersum HOM05D001551 ORTHO05D005859 1.9e-08 63.2 56 55.4


User provided reference genes

Program Settings