Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038613 Camellia sinensis var. sinensis HOM05D006698 ORTHO05D008415 0.0e+00 1090.5 539 100.0
Rhsim06G0023700 Rhododendron simsii HOM05D006698 ORTHO05D008415 5.2e-248 860.9 540 77.8
vmacro21711 Vaccinium macrocarpon HOM05D006698 ORTHO05D008415 6.6e-235 817.4 562 72.1
TAR628G0086 Trochodendron aralioides HOM05D006698 ORTHO05D008415 1.4e-213 746.5 541 66.9
Cfa013924 Carpinus fangiana HOM05D006698 ORTHO05D008415 3.2e-213 745.3 540 65.4
GSVIVG01009862001 Vitis vinifera HOM05D006698 ORTHO05D008415 1.7e-211 739.6 539 65.3
Lj4A795T33 Lonicera japonica HOM05D006698 ORTHO05D008415 4.3e-210 734.9 539 65.5
Haze_22605 Corylus avellana HOM05D006698 ORTHO05D008415 8.1e-209 730.7 567 62.6
QL02p011012 Quercus lobata HOM05D006698 ORTHO05D008415 2.0e-207 726.1 542 64.9
Oeu027550.1 Olea europaea HOM05D006698 ORTHO05D008415 7.6e-207 724.2 541 65.6
Prupe.1G368700 Prunus persica HOM05D006698 ORTHO05D008415 7.6e-207 724.2 540 64.4
Actinidia16966 Actinidia chinensis HOM05D006698 ORTHO05D008415 3.8e-206 721.8 446 79.1
Thecc.08G041000 Theobroma cacao HOM05D006698 ORTHO05D008415 3.8e-206 721.8 540 65.6
Duzib093G0690 Durio zibethinus HOM05D006698 ORTHO05D008415 1.1e-205 720.3 540 65.9
CiPaw.09G133200 Carya illinoinensis HOM05D006698 ORTHO05D008415 2.1e-204 716.1 540 63.3
Nn6g32301 Nelumbo nucifera HOM05D006698 ORTHO05D008415 3.5e-204 715.3 539 63.6
Gorai.002G124600 Gossypium raimondii HOM05D006698 ORTHO05D008415 6.2e-201 704.5 540 63.1
Ciclev10000799m.g Citrus clementina HOM05D006698 ORTHO05D008415 3.1e-200 702.2 540 63.0
TWI12G1415 Tripterygium wilfordii HOM05D006698 ORTHO05D008415 5.2e-200 701.4 540 63.1
MD09G1232000 Malus domestica HOM05D006698 ORTHO05D008415 1.5e-199 699.9 542 63.5
Gohir.D01G099300 Gossypium hirsutum HOM05D006698 ORTHO05D008415 3.4e-199 698.7 540 62.8
Gohir.A01G112500 Gossypium hirsutum HOM05D006698 ORTHO05D008415 4.4e-199 698.4 540 62.8
Aqoxy5G01450 Aquilegia oxysepala HOM05D006698 ORTHO05D008415 9.3e-197 690.6 539 61.4
MSTRG.22331 Avicennia marina HOM05D006698 ORTHO05D008415 1.2e-196 690.3 542 63.3
MELO3C003770.2 Cucumis melo HOM05D006698 ORTHO05D008415 2.7e-196 689.1 540 61.1
CsaV3_3G045670 Cucumis sativus L. HOM05D006698 ORTHO05D008415 2.7e-196 689.1 540 60.6
THA.LOC104823101 Tarenaya hassleriana HOM05D006698 ORTHO05D008415 3.5e-196 688.7 540 62.0
Potri.005G236400 Populus trichocarpa HOM05D006698 ORTHO05D008415 3.9e-195 685.3 542 62.9
RcHm_v2.0_Chr6g0302501 Rosa chinensis HOM05D006698 ORTHO05D008415 5.1e-195 684.9 541 61.2
CAN.G1271.13 Capsicum annuum HOM05D006698 ORTHO05D008415 2.5e-194 682.6 540 63.3
Migut.N03146 Erythranthe guttata HOM05D006698 ORTHO05D008415 4.8e-193 678.3 542 62.0
PGSC0003DMG400003770 Solanum tuberosum HOM05D006698 ORTHO05D008415 6.2e-193 677.9 540 62.6
Cpa.g.sc14.105 Carica papaya HOM05D006698 ORTHO05D008415 2.4e-192 676.0 543 62.1
Sopen04g034840 Solanum pennellii HOM05D006698 ORTHO05D008415 5.3e-192 674.9 540 62.2
Peaxi162Scf00287g01719 Petunia axillaris HOM05D006698 ORTHO05D008415 6.9e-192 674.5 541 64.0
Solyc04g081230.3 Solanum lycopersicum HOM05D006698 ORTHO05D008415 6.9e-192 674.5 539 61.8
Sabra05G0182800 Salix brachista HOM05D006698 ORTHO05D008415 2.0e-191 672.9 542 62.5
Eucgr.F01632 Eucalyptus grandis HOM05D006698 ORTHO05D008415 1.7e-190 669.8 542 60.7
FAN27G1564 Fragaria x ananassa HOM05D006698 ORTHO05D008415 2.2e-190 669.5 540 59.6
ECA238G1455 Erigeron canadensis HOM05D006698 ORTHO05D008415 2.9e-190 669.1 536 62.1
FvH4_2g38790 Fragaria vesca HOM05D006698 ORTHO05D008415 3.8e-190 668.7 540 59.6
FAN15G2932 Fragaria x ananassa HOM05D006698 ORTHO05D008415 3.8e-190 668.7 540 59.4
arahy.Tifrunner.gnm1.ann1.HU0S2W Arachis hypogaea HOM05D006698 ORTHO05D008415 1.9e-189 666.4 540 60.6
Oeu027551.1 Olea europaea HOM05D006698 ORTHO05D008415 1.9e-189 666.4 491 65.6
SGA_v2.0_scaffold47G17495 Striga asiatica HOM05D006698 ORTHO05D008415 1.9e-189 666.4 541 61.4
DCAR_009935 Daucus carota HOM05D006698 ORTHO05D008415 2.4e-189 666.0 539 61.8
Sed0002694 Sechium edule HOM05D006698 ORTHO05D008415 4.2e-189 665.2 540 59.3
Lj1g0011928 Lotus japonicus HOM05D006698 ORTHO05D008415 1.2e-188 663.7 544 61.8
arahy.Tifrunner.gnm1.ann1.32JQZQ Arachis hypogaea HOM05D006698 ORTHO05D008415 2.1e-188 662.9 540 60.2
Cc10_g01920 Coffea canephora HOM05D006698 ORTHO05D008415 2.1e-188 662.9 601 58.4
CANSAT35G1394 Cannabis sativa HOM05D006698 ORTHO05D008415 2.3e-187 659.4 542 59.6
PGR083G1075 Punica granatum HOM05D006698 ORTHO05D008415 3.9e-187 658.7 545 59.8
CARHR262700 Cardamine hirsuta HOM05D006698 ORTHO05D008415 6.7e-187 657.9 542 57.7
Glyma.04G215400 Glycine max HOM05D006698 ORTHO05D008415 6.7e-187 657.9 541 60.6
Ca_16921_v3 Cicer arietinum L. HOM05D006698 ORTHO05D008415 1.5e-186 656.8 541 60.1
HanXRQChr04g0101141 Helianthus annuus HOM05D006698 ORTHO05D008415 1.5e-186 656.8 539 60.9
Sp7g02400 Schrenkiella parvula HOM05D006698 ORTHO05D008415 1.9e-186 656.4 542 58.9
Carub.0007s3635 Capsella rubella HOM05D006698 ORTHO05D008415 3.7e-185 652.1 543 58.7
A04p12330 Brassica napus HOM05D006698 ORTHO05D008415 3.1e-184 649.0 542 57.7
BraA04t16897Z Brassica rapa HOM05D006698 ORTHO05D008415 4.0e-184 648.7 542 57.9
TPR.G18731 Trifolium pratense HOM05D006698 ORTHO05D008415 4.0e-184 648.7 541 58.6
C04p46000 Brassica napus HOM05D006698 ORTHO05D008415 6.9e-184 647.9 542 57.7
BolC4t26182H Brassica oleracea HOM05D006698 ORTHO05D008415 6.9e-184 647.9 542 57.7
PSO170G5361 Papaver somniferum HOM05D006698 ORTHO05D008415 6.9e-184 647.9 541 59.3
PSO210G5790 Papaver somniferum HOM05D006698 ORTHO05D008415 6.9e-184 647.9 541 59.3
AT5G39590 Arabidopsis thaliana HOM05D006698 ORTHO05D008415 2.6e-183 646.0 543 57.8
Phvul.009G147800 Phaseolus vulgaris HOM05D006698 ORTHO05D008415 1.7e-182 643.3 540 58.7
AL7G50720 Arabidopsis lyrata HOM05D006698 ORTHO05D008415 2.2e-182 642.9 543 57.8
Hund24100 Selenicereus undatus HOM05D006698 ORTHO05D008415 6.0e-180 634.8 542 58.3
MBI09_g13764_MAGBIO Magnolia biondii HOM05D006698 ORTHO05D008415 1.0e-179 634.0 544 59.0
Aa31LG9G16490 Aethionema arabicum HOM05D006698 ORTHO05D008415 1.8e-179 633.3 573 55.1
Lsat_1_v5_gn_2_11660 Lactuca sativa HOM05D006698 ORTHO05D008415 1.8e-179 633.3 535 58.9
Nitab4.5_0001988g0020 Nicotiana tabacum HOM05D006698 ORTHO05D008415 1.1e-178 630.6 489 63.4
AUR62035724 Chenopodium quinoa HOM05D006698 ORTHO05D008415 1.5e-178 630.2 540 56.3
VMungo1309G0200 Vigna mungo HOM05D006698 ORTHO05D008415 1.5e-178 630.2 540 57.6
Medtr3g095660 Medicago truncatula HOM05D006698 ORTHO05D008415 1.9e-178 629.8 540 58.1
Lalb_Chr08g0238541 Lupinus albus HOM05D006698 ORTHO05D008415 2.1e-177 626.3 540 57.6
Atru.chr13.326 Acer truncatum HOM05D006698 ORTHO05D008415 9.0e-176 620.9 469 64.6
PSO170G6283 Papaver somniferum HOM05D006698 ORTHO05D008415 1.3e-174 617.1 549 56.8
EL10Ac1g02260 Beta vulgaris HOM05D006698 ORTHO05D008415 1.7e-174 616.7 541 54.5
PSO210G1198 Papaver somniferum HOM05D006698 ORTHO05D008415 1.7e-174 616.7 549 56.8
Ah.11g039450 Amaranthus hybridus HOM05D006698 ORTHO05D008415 3.8e-174 615.5 541 56.2
Thhalv10027724m.g Eutrema salsugineum HOM05D006698 ORTHO05D008415 1.3e-171 607.1 541 54.9
FAN20G0171 Fragaria x ananassa HOM05D006698 ORTHO05D008415 3.9e-171 605.5 633 50.6
ClCG05G018510 Citrullus lanatus HOM05D006698 ORTHO05D008415 2.8e-169 599.4 540 54.6
SalBow8G5338 Salvia bowleyana HOM05D006698 ORTHO05D008415 2.6e-167 592.8 592 53.0
Dinv31825 Davidia involucrata HOM05D006698 ORTHO05D008415 3.2e-165 585.9 539 57.9
BcaB06g27346 Brassica carinata HOM05D006698 ORTHO05D008415 2.2e-161 573.2 542 53.3
AUR62035437 Chenopodium quinoa HOM05D006698 ORTHO05D008415 3.8e-158 562.4 460 57.4
Manes.18G015700 Manihot esculenta HOM05D006698 ORTHO05D008415 5.0e-158 562.0 429 64.3
Psat5g063280 Pisum sativum HOM05D006698 ORTHO05D008415 7.2e-149 531.6 471 56.1
HPP92_014935 Vanilla planifolia HOM05D006698 ORTHO05D008415 9.4e-149 531.2 543 51.7
SHI08084 Sapria himalayana HOM05D006698 ORTHO05D008415 6.7e-147 525.0 559 50.4
CDE09G0091 Ceratophyllum demersum HOM05D006698 ORTHO05D008415 3.7e-145 519.2 481 53.4
ATR0147G003 Amborella trichopoda HOM05D006698 ORTHO05D008415 7.0e-144 515.0 554 48.9
Os04g0663700 Oryza sativa ssp. japonica HOM05D006698 ORTHO05D008415 4.0e-131 472.6 555 47.9
Zm00001eb067290 Zea mays HOM05D006698 ORTHO05D008415 2.2e-129 466.8 559 48.3
Potri.002G025032 Populus trichocarpa HOM05D006698 ORTHO05D008415 1.8e-123 447.2 311 67.8
SEGI_26467 Sequoiadendron giganteum HOM05D006698 ORTHO05D008415 9.8e-122 441.4 495 47.1
Sc15g0005110 Simmondsia chinensis HOM05D006698 ORTHO05D008415 1.4e-120 437.6 400 53.8
Pp3c16_7090 Physcomitrium patens HOM05D006698 ORTHO05D008415 4.1e-96 356.3 560 38.2
Pp3c5_11350 Physcomitrium patens HOM05D006698 ORTHO05D008415 3.3e-93 346.7 559 37.2
Mapoly0043s0042 Marchantia polymorpha HOM05D006698 ORTHO05D008415 1.1e-80 305.1 574 33.3
SMO145G0265 Selaginella moellendorffii HOM05D006698 ORTHO05D008415 1.1e-80 305.1 475 37.7
unitig_27.g25099 Utricularia gibba HOM05D006698 ORTHO05D008415 2.8e-76 290.4 223 64.6
AagrBONN_evm.TU.Sc2ySwM_344.812 Anthoceros agrestis HOM05D006698 ORTHO05D008415 3.6e-76 290.0 570 36.3
AagrBONN_evm.TU.Sc2ySwM_344.842 Anthoceros agrestis HOM05D006698 ORTHO05D008415 1.2e-74 285.0 563 36.1
Glyma.06G150801 Glycine max HOM05D006698 ORTHO05D008415 4.5e-66 256.5 208 60.1
unitig_27.g25098 Utricularia gibba HOM05D006698 ORTHO05D008415 1.4e-51 208.4 249 44.2
Potri.002G024966 Populus trichocarpa HOM05D006698 ORTHO05D008415 1.0e-49 202.2 174 62.1
QL03p018220 Quercus lobata HOM05D006698 ORTHO05D008415 1.7e-41 174.9 109 71.6
QL03p018243 Quercus lobata HOM05D006698 ORTHO05D008415 7.7e-34 149.4 197 44.2
Actinidia16965 Actinidia chinensis HOM05D006698 ORTHO05D008415 9.4e-32 142.5 76 90.8
HanXRQChr05g0147331 Helianthus annuus HOM05D006698 ORTHO05D008415 1.8e-27 128.3 116 49.1
Medtr7g098720 Medicago truncatula HOM05D006698 ORTHO05D008415 5.0e-25 120.2 124 48.4
Oeu046256.1 Olea europaea HOM05D006698 ORTHO05D008415 2.9e-17 94.4 58 69.0
Cpa.g.sc14.104 Carica papaya HOM05D006698 ORTHO05D008415 1.9e-16 91.7 72 61.1
ATR0370G001 Amborella trichopoda HOM05D006698 ORTHO05D008415 3.8e-09 67.4 51 64.7
Duzib116G0861 Durio zibethinus HOM05D006698 ORTHO05D008415 2.5e-08 64.7 56 60.7
Cpa.g.sc14.103 Carica papaya HOM05D006698 ORTHO05D120905 1.0e-06 59.3 80 45.0


User provided reference genes

Program Settings