Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038566 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 2.7e-92 342.0 177 100.0
CSS0039739 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 5.0e-75 284.6 198 80.8
CSS0029462 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 6.6e-75 284.3 210 76.7
Actinidia15492 Actinidia chinensis HOM05D005571 ORTHO05D006919 5.4e-45 184.9 212 54.7
Actinidia17042 Actinidia chinensis HOM05D005571 ORTHO05D006919 1.7e-43 179.9 212 54.2
vmacro21809 Vaccinium macrocarpon HOM05D005571 ORTHO05D006919 1.1e-42 177.2 215 54.0
Rhsim06G0007100 Rhododendron simsii HOM05D005571 ORTHO05D006919 4.8e-41 171.8 210 51.0
CSS0030992 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 4.9e-38 161.8 208 53.8
GSVIVG01008671001 Vitis vinifera HOM05D005571 ORTHO05D006919 7.9e-36 154.5 206 48.1
Potri.005G250800 Populus trichocarpa HOM05D005571 ORTHO05D006919 1.9e-34 149.8 211 46.9
Sabra05G0194000 Salix brachista HOM05D005571 ORTHO05D006919 1.3e-33 147.1 213 46.0
Haze_22782 Corylus avellana HOM05D005571 ORTHO05D006919 1.1e-32 144.1 214 44.4
Nitab4.5_0000588g0080 Nicotiana tabacum HOM05D005571 ORTHO05D006919 3.1e-32 142.5 213 46.0
Hma1.2p1_0157F.1_g069390 Hydrangea macrophylla HOM05D005571 ORTHO05D006919 9.0e-32 141.0 213 46.9
CiPaw.08G073400 Carya illinoinensis HOM05D005571 ORTHO05D006919 1.2e-31 140.6 210 44.8
TAR628G0603 Trochodendron aralioides HOM05D005571 ORTHO05D006919 1.5e-31 140.2 170 51.8
Dinv05532 Davidia involucrata HOM05D005571 ORTHO05D006919 2.0e-31 139.8 209 48.8
Manes.05G133900 Manihot esculenta HOM05D005571 ORTHO05D006919 2.0e-31 139.8 209 47.8
Cfa014080 Carpinus fangiana HOM05D005571 ORTHO05D006919 2.6e-31 139.4 213 43.7
Potri.002G010400 Populus trichocarpa HOM05D005571 ORTHO05D006919 3.4e-31 139.0 211 45.5
CiPaw.07G138600 Carya illinoinensis HOM05D005571 ORTHO05D006919 5.8e-31 138.3 214 45.3
Thecc.08G059400 Theobroma cacao HOM05D005571 ORTHO05D006919 5.8e-31 138.3 210 46.2
Peaxi162Scf00893g00005 Petunia axillaris HOM05D005571 ORTHO05D006919 7.6e-31 137.9 209 45.9
Sabra02G0007800 Salix brachista HOM05D005571 ORTHO05D006919 7.6e-31 137.9 210 46.2
Manes.18G005301 Manihot esculenta HOM05D005571 ORTHO05D006919 1.3e-30 137.1 210 44.8
COL.COLO4_05218 Corchorus olitorius HOM05D005571 ORTHO05D006919 1.7e-30 136.7 213 46.0
Duzib116G0932 Durio zibethinus HOM05D005571 ORTHO05D006919 2.2e-30 136.3 212 46.2
Oeu064631.1 Olea europaea HOM05D005571 ORTHO05D006919 1.4e-29 133.7 211 43.6
CAN.G311.116 Capsicum annuum HOM05D005571 ORTHO05D006919 1.9e-29 133.3 215 45.1
Duzib093G0863 Durio zibethinus HOM05D005571 ORTHO05D006919 2.4e-29 132.9 210 44.3
PGR083G0609 Punica granatum HOM05D005571 ORTHO05D006919 3.2e-29 132.5 214 45.8
QL02p014184 Quercus lobata HOM05D005571 ORTHO05D006919 3.2e-29 132.5 216 43.1
Sopen04g035980 Solanum pennellii HOM05D005571 ORTHO05D006919 1.6e-28 130.2 213 45.5
Ciclev10002509m.g Citrus clementina HOM05D005571 ORTHO05D006919 4.6e-28 128.6 210 43.8
PGSC0003DMG400009903 Solanum tuberosum HOM05D005571 ORTHO05D006919 4.6e-28 128.6 159 53.5
ClCG08G009410 Citrullus lanatus HOM05D005571 ORTHO05D006919 7.9e-28 127.9 209 44.0
Lj4A11T70 Lonicera japonica HOM05D005571 ORTHO05D006919 2.3e-27 126.3 213 44.1
MELO3C026535.2 Cucumis melo HOM05D005571 ORTHO05D006919 3.9e-27 125.6 212 45.8
TWI56G1114 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 5.1e-27 125.2 212 43.4
DCAR_009532 Daucus carota HOM05D005571 ORTHO05D006919 3.3e-26 122.5 212 42.9
CsaV3_6G031520 Cucumis sativus L. HOM05D005571 ORTHO05D006919 7.4e-26 121.3 215 42.3
Aqoxy6G01708 Aquilegia oxysepala HOM05D005571 ORTHO05D006919 1.3e-25 120.6 152 50.7
Oeu035840.1 Olea europaea HOM05D005571 ORTHO05D006919 1.3e-25 120.6 171 46.2
Gohir.A05G179400 Gossypium hirsutum HOM05D005571 ORTHO05D006919 1.6e-25 120.2 218 42.7
Gohir.D05G182600 Gossypium hirsutum HOM05D005571 ORTHO05D006919 2.8e-25 119.4 216 41.7
Gorai.009G187900 Gossypium raimondii HOM05D005571 ORTHO05D006919 2.8e-25 119.4 216 41.7
Cc10_g00650 Coffea canephora HOM05D005571 ORTHO05D006919 3.7e-25 119.0 214 42.5
TWI12G0392 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 6.2e-25 118.2 211 41.7
Lj1g0015612 Lotus japonicus HOM05D005571 ORTHO05D006919 1.1e-24 117.5 211 39.3
Sed0002015 Sechium edule HOM05D005571 ORTHO05D006919 1.4e-24 117.1 213 41.8
Dinv31944 Davidia involucrata HOM05D005571 ORTHO05D006919 6.9e-24 114.8 215 44.2
Migut.C00385 Erythranthe guttata HOM05D005571 ORTHO05D006919 6.9e-24 114.8 222 41.0
Glyma.06G018100 Glycine max HOM05D005571 ORTHO05D006919 6.9e-24 114.8 203 41.4
Phvul.009G010900 Phaseolus vulgaris HOM05D005571 ORTHO05D006919 5.8e-23 111.7 195 42.6
VMungo1309G0957 Vigna mungo HOM05D005571 ORTHO05D006919 1.7e-22 110.2 196 40.8
MSTRG.24929 Avicennia marina HOM05D005571 ORTHO05D006919 2.9e-22 109.4 217 40.1
Glyma.04G017800 Glycine max HOM05D005571 ORTHO05D006919 2.9e-22 109.4 202 40.6
Nn6g31737 Nelumbo nucifera HOM05D005571 ORTHO05D006919 6.5e-22 108.2 157 47.8
FvH4_2g37430 Fragaria vesca HOM05D005571 ORTHO05D006919 8.4e-22 107.8 218 38.5
RcHm_v2.0_Chr6g0304291 Rosa chinensis HOM05D005571 ORTHO05D006919 1.1e-21 107.5 212 38.7
SGA_v2.0_scaffold133G34635 Striga asiatica HOM05D005571 ORTHO05D006919 1.1e-21 107.5 223 39.9
Lalb_Chr23g0265781 Lupinus albus HOM05D005571 ORTHO05D006919 1.4e-21 107.1 212 42.5
Oeu000692.1 Olea europaea HOM05D005571 ORTHO05D006919 4.2e-21 105.5 216 38.9
CANSAT25G0564 Cannabis sativa HOM05D005571 ORTHO05D006919 7.1e-21 104.8 207 40.1
Hund01764 Selenicereus undatus HOM05D005571 ORTHO05D006919 7.1e-21 104.8 205 42.9
THA.LOC104813174 Tarenaya hassleriana HOM05D005571 ORTHO05D006919 7.1e-21 104.8 205 39.5
Lsat_1_v5_gn_2_4041 Lactuca sativa HOM05D005571 ORTHO05D006919 1.2e-20 104.0 220 39.1
unitig_0.g2084 Utricularia gibba HOM05D005571 ORTHO05D006919 1.2e-20 104.0 178 41.6
HanXRQChr14g0428071 Helianthus annuus HOM05D005571 ORTHO05D006919 2.1e-20 103.2 216 38.4
AUR62040795 Chenopodium quinoa HOM05D005571 ORTHO05D006919 2.7e-20 102.8 188 40.4
FAN15G1374 Fragaria x ananassa HOM05D005571 ORTHO05D006919 3.5e-20 102.4 212 39.2
Cfa012650 Carpinus fangiana HOM05D005571 ORTHO05D006919 6.0e-20 101.7 188 41.0
FAN27G2782 Fragaria x ananassa HOM05D005571 ORTHO05D006919 6.0e-20 101.7 216 37.5
SalBow7G0698 Salvia bowleyana HOM05D005571 ORTHO05D006919 6.0e-20 101.7 223 39.0
EL10Ac1g01953 Beta vulgaris HOM05D005571 ORTHO05D006919 1.3e-19 100.5 184 41.3
FAN20G2818 Fragaria x ananassa HOM05D005571 ORTHO05D006919 1.3e-19 100.5 216 37.0
Gorai.005G113600 Gossypium raimondii HOM05D005571 ORTHO05D006919 1.3e-19 100.5 197 42.6
Ah.11g041150 Amaranthus hybridus HOM05D005571 ORTHO05D006919 1.8e-19 100.1 196 36.7
Carub.0008s0685 Capsella rubella HOM05D005571 ORTHO05D006919 2.3e-19 99.8 196 38.3
HanXRQChr06g0183961 Helianthus annuus HOM05D005571 ORTHO05D006919 2.3e-19 99.8 154 46.1
TPR.G38112 Trifolium pratense HOM05D005571 ORTHO05D006919 2.3e-19 99.8 175 40.6
MSTRG.977 Avicennia marina HOM05D005571 ORTHO05D006919 6.7e-19 98.2 159 42.1
unitig_747.g21542 Utricularia gibba HOM05D005571 ORTHO05D006919 6.7e-19 98.2 178 42.1
Gohir.D02G100200 Gossypium hirsutum HOM05D005571 ORTHO05D006919 8.7e-19 97.8 197 42.1
Medtr3g115300 Medicago truncatula HOM05D005571 ORTHO05D006919 8.7e-19 97.8 175 40.6
THA.LOC104825425 Tarenaya hassleriana HOM05D005571 ORTHO05D006919 8.7e-19 97.8 199 39.2
Sc02g0009100 Simmondsia chinensis HOM05D005571 ORTHO05D006919 1.1e-18 97.4 196 37.8
AT5G42330 Arabidopsis thaliana HOM05D005571 ORTHO05D006919 1.5e-18 97.1 208 38.0
Psat0s2670g0120 Pisum sativum HOM05D005571 ORTHO05D006919 1.9e-18 96.7 165 41.2
AL8G19260 Arabidopsis lyrata HOM05D005571 ORTHO05D006919 2.5e-18 96.3 199 40.2
SalBow5G5667 Salvia bowleyana HOM05D005571 ORTHO05D006919 3.3e-18 95.9 197 39.6
CARHR284960 Cardamine hirsuta HOM05D005571 ORTHO05D006919 7.4e-18 94.7 219 37.9
Aa31LG9G12460 Aethionema arabicum HOM05D005571 ORTHO05D006919 1.3e-17 94.0 169 40.8
arahy.Tifrunner.gnm1.ann1.G9B5FS Arachis hypogaea HOM05D005571 ORTHO05D006919 3.1e-16 89.4 221 34.8
Thhalv10014687m.g Eutrema salsugineum HOM05D005571 ORTHO05D006919 1.2e-15 87.4 215 35.8
arahy.Tifrunner.gnm1.ann1.VC4QUA Arachis hypogaea HOM05D005571 ORTHO05D006919 1.5e-15 87.0 217 35.0
MBI05_g43168_MAGBIO Magnolia biondii HOM05D005571 ORTHO05D006919 2.0e-15 86.7 172 41.3
Sp6g25100 Schrenkiella parvula HOM05D005571 ORTHO05D006919 4.5e-15 85.5 211 35.1
Atru.chr13.137 Acer truncatum HOM05D005571 ORTHO05D006919 5.8e-15 85.1 149 45.0
BcaB01g05139 Brassica carinata HOM05D005571 ORTHO05D006919 7.6e-15 84.7 197 38.1
C03p11000 Brassica napus HOM05D005571 ORTHO05D006919 1.0e-14 84.3 195 37.4
BcaB01g04868 Brassica carinata HOM05D005571 ORTHO05D006919 1.3e-14 84.0 201 34.3
A03p09420 Brassica napus HOM05D005571 ORTHO05D006919 1.7e-14 83.6 198 36.9
BraA03t10260Z Brassica rapa HOM05D005571 ORTHO05D006919 1.7e-14 83.6 198 36.9
BolC3t13569H Brassica oleracea HOM05D005571 ORTHO05D006919 2.2e-14 83.2 197 37.1
Hund05103 Selenicereus undatus HOM05D001348 ORTHO05D002788 2.2e-14 83.2 184 39.1
ECA238G3324 Erigeron canadensis HOM05D005571 ORTHO05D007881 1.4e-13 80.5 170 38.8
BcaB08g36584 Brassica carinata HOM05D005571 ORTHO05D006919 5.5e-13 78.6 142 44.4
Sabra11G0114300 Salix brachista HOM05D005571 ORTHO05D006919 7.2e-13 78.2 124 44.4
PSO675G2006 Papaver somniferum HOM05D005571 ORTHO05D006919 1.2e-12 77.4 178 39.3
Prupe.1G354300 Prunus persica HOM05D005571 ORTHO05D006919 4.6e-12 75.5 246 32.9
PSO541G4697 Papaver somniferum HOM05D005571 ORTHO05D006919 1.3e-11 73.9 152 40.1
Ca_15432_v3 Cicer arietinum L. HOM05D005571 ORTHO05D006919 1.8e-11 73.6 124 44.4
Ca_15457_v3 Cicer arietinum L. HOM05D005571 ORTHO05D006919 1.8e-11 73.6 124 44.4
Sc15g0004410 Simmondsia chinensis HOM05D005571 ORTHO05D006919 3.9e-11 72.4 148 39.9
CDE05G1909 Ceratophyllum demersum HOM05D005571 ORTHO05D006919 1.1e-10 70.9 156 39.1
SHI42933 Sapria himalayana HOM05D005571 ORTHO05D006919 6.3e-09 65.1 143 36.4
CDE04G0695 Ceratophyllum demersum HOM05D005571 ORTHO05D006919 8.2e-09 64.7 176 39.8
AUR62036861 Chenopodium quinoa HOM05D005571 ORTHO05D006919 3.4e-07 59.3 160 32.5
A02p05480 Brassica napus HOM05D005571 ORTHO05D006919 4.5e-07 58.9 140 34.3
BraA02t05499Z Brassica rapa HOM05D005571 ORTHO05D006919 4.5e-07 58.9 140 34.3
BcaC03g13663 Brassica carinata HOM05D005571 ORTHO05D006919 1.0e-06 57.8 140 33.6
BNapus_Darmor_BZH_scaffold_38p02630 Brassica napus HOM05D005571 ORTHO05D006919 1.0e-06 57.8 140 33.6
ECA238G3056 Erigeron canadensis HOM05D002204 ORTHO05D002875 1.3e-06 57.4 105 40.0
BcaC04g18579 Brassica carinata HOM05D005571 ORTHO05D006919 8.5e-06 54.7 161 36.6
A10p20370 Brassica napus HOM05D005571 ORTHO05D006919 8.5e-06 54.7 174 34.5
C09p56960 Brassica napus HOM05D005571 ORTHO05D006919 8.5e-06 54.7 161 36.6
BolC9t58559H Brassica oleracea HOM05D005571 ORTHO05D006919 8.5e-06 54.7 161 36.6


User provided reference genes

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