Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038536 Camellia sinensis var. sinensis HOM05D005335 ORTHO05D006472 1.3e-77 293.1 164 100.0
Duzib084G1383 Durio zibethinus HOM05D005335 ORTHO05D006472 4.0e-34 148.7 188 55.3
Nn3g16458 Nelumbo nucifera HOM05D005335 ORTHO05D006472 3.4e-33 145.6 185 55.1
Actinidia36728 Actinidia chinensis HOM05D005335 ORTHO05D006472 6.0e-30 134.8 152 57.9
CSS0021703 Camellia sinensis var. sinensis HOM05D005335 ORTHO05D006472 1.0e-29 134.0 164 56.1
Dinv11173 Davidia involucrata HOM05D001420 ORTHO05D002488 1.2e-27 127.1 185 51.9
Gorai.009G431200 Gossypium raimondii HOM05D005335 ORTHO05D006472 1.2e-27 127.1 178 52.2
Thecc.03G129400 Theobroma cacao HOM05D005335 ORTHO05D006472 1.6e-27 126.7 184 50.5
Gohir.D05G361600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 2.1e-27 126.3 178 52.2
TAR371G0199 Trochodendron aralioides HOM05D005335 ORTHO05D006472 2.8e-27 125.9 178 51.7
Gohir.D09G247500 Gossypium hirsutum HOM05D005335 ORTHO05D006472 6.2e-27 124.8 183 50.8
Gorai.006G272000 Gossypium raimondii HOM05D005335 ORTHO05D006472 1.4e-26 123.6 183 50.3
Duzib205G0334 Durio zibethinus HOM05D005335 ORTHO05D006472 1.8e-26 123.2 177 50.8
Gohir.D08G258700 Gossypium hirsutum HOM05D005335 ORTHO05D006472 1.5e-25 120.2 183 48.6
Hma1.2p1_0014F.1_g009400 Hydrangea macrophylla HOM05D005335 ORTHO05D006472 2.6e-25 119.4 185 49.2
PGR044G0086 Punica granatum HOM05D005335 ORTHO05D006472 2.6e-25 119.4 179 48.6
Cfa018794 Carpinus fangiana HOM05D005335 ORTHO05D006472 3.4e-25 119.0 179 53.6
COL.COLO4_28131 Corchorus olitorius HOM05D005335 ORTHO05D006472 5.8e-25 118.2 180 48.3
Haze_07140 Corylus avellana HOM05D005335 ORTHO05D006472 5.8e-25 118.2 175 53.1
TAR629G1091 Trochodendron aralioides HOM05D005335 ORTHO05D006472 2.9e-24 115.9 170 49.4
Rhsim08G0190300 Rhododendron simsii HOM05D005335 ORTHO05D006472 3.7e-24 115.5 185 51.4
QL10p002879 Quercus lobata HOM05D005335 ORTHO05D006472 4.9e-24 115.2 197 48.7
Cpa.g.sc13.114 Carica papaya HOM05D005335 ORTHO05D006472 6.4e-24 114.8 190 48.9
Gorai.004G276200 Gossypium raimondii HOM05D005335 ORTHO05D006472 6.4e-24 114.8 181 48.6
ClCG06G017900 Citrullus lanatus HOM05D005335 ORTHO05D006472 3.2e-23 112.5 177 47.5
Potri.012G097901 Populus trichocarpa HOM05D005335 ORTHO05D006472 3.2e-23 112.5 193 49.7
Nitab4.5_0002403g0010 Nicotiana tabacum HOM05D005335 ORTHO05D006472 5.4e-23 111.7 183 47.5
Gohir.A04G026600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 7.1e-23 111.3 142 54.2
Actinidia08873 Actinidia chinensis HOM05D001420 ORTHO05D002488 2.7e-22 109.4 173 49.7
FAN13G0785 Fragaria x ananassa HOM05D005335 ORTHO05D006472 2.7e-22 109.4 176 44.9
Rhsim12G0175000 Rhododendron simsii HOM05D005335 ORTHO05D006472 2.7e-22 109.4 172 47.1
TWI39G0987 Tripterygium wilfordii HOM05D005335 ORTHO05D006472 3.5e-22 109.0 182 46.2
Oeu023482.1 Olea europaea HOM05D005335 ORTHO05D006472 4.6e-22 108.6 184 49.5
BcaB05g23008 Brassica carinata HOM05D005335 ORTHO05D006472 7.8e-22 107.8 179 45.8
A01p25690 Brassica napus HOM05D005335 ORTHO05D006472 1.0e-21 107.5 182 46.7
BraA01t02445Z Brassica rapa HOM05D005335 ORTHO05D006472 1.0e-21 107.5 182 46.7
MELO3C026206.2 Cucumis melo HOM05D005335 ORTHO05D006472 1.0e-21 107.5 177 46.9
DCAR_016388 Daucus carota HOM05D005335 ORTHO05D006472 1.3e-21 107.1 182 44.0
Gohir.A09G247000 Gossypium hirsutum HOM05D005335 ORTHO05D006472 1.3e-21 107.1 183 47.0
FAN04G0838 Fragaria x ananassa HOM05D005335 ORTHO05D006472 1.7e-21 106.7 177 46.9
MD06G1141500 Malus domestica HOM05D005335 ORTHO05D006472 1.7e-21 106.7 172 47.1
A06p19120 Brassica napus HOM05D005335 ORTHO05D006472 2.3e-21 106.3 183 45.9
BraA06t24996Z Brassica rapa HOM05D005335 ORTHO05D006472 2.3e-21 106.3 183 45.9
BolC1t03128H Brassica oleracea HOM05D005335 ORTHO05D006472 3.0e-21 105.9 179 45.8
Cc04_g09930 Coffea canephora HOM05D005335 ORTHO05D006472 3.0e-21 105.9 187 47.6
FvH4_5g08350 Fragaria vesca HOM05D005335 ORTHO05D006472 3.9e-21 105.5 172 46.5
FAN18G1337 Fragaria x ananassa HOM05D005335 ORTHO05D006472 3.9e-21 105.5 172 46.5
Nn4g22311 Nelumbo nucifera HOM05D005335 ORTHO05D006472 3.9e-21 105.5 170 49.4
PSO017G0745 Papaver somniferum HOM05D005335 ORTHO05D006472 3.9e-21 105.5 194 43.3
CiPaw.11G007000 Carya illinoinensis HOM05D005335 ORTHO05D006472 5.1e-21 105.1 177 48.0
Dinv23148 Davidia involucrata HOM05D005335 ORTHO05D006472 5.1e-21 105.1 117 62.4
PSO478G2775 Papaver somniferum HOM05D005335 ORTHO05D006472 6.6e-21 104.8 194 42.3
Manes.06G119800 Manihot esculenta HOM05D005335 ORTHO05D006472 1.1e-20 104.0 179 45.3
Sc04g0000630 Simmondsia chinensis HOM05D005335 ORTHO05D006472 1.1e-20 104.0 171 46.2
vmacro19206 Vaccinium macrocarpon HOM05D005335 ORTHO05D006472 1.1e-20 104.0 176 50.0
Prupe.5G150800 Prunus persica HOM05D005335 ORTHO05D006472 1.5e-20 103.6 157 49.0
FAN08G1274 Fragaria x ananassa HOM05D005335 ORTHO05D006472 1.9e-20 103.2 177 45.8
RcHm_v2.0_Chr7g0190101 Rosa chinensis HOM05D005335 ORTHO05D006472 2.5e-20 102.8 171 46.2
Sabra15G0117300 Salix brachista HOM05D005335 ORTHO05D006472 2.5e-20 102.8 179 46.4
Peaxi162Scf00009g00007 Petunia axillaris HOM05D005335 ORTHO05D006472 3.3e-20 102.4 165 48.5
Potri.015G096500 Populus trichocarpa HOM05D005335 ORTHO05D006472 3.3e-20 102.4 180 46.1
Atru.chr6.1795 Acer truncatum HOM05D005335 ORTHO05D006472 4.3e-20 102.1 185 47.0
Sabra12G0071600 Salix brachista HOM05D005335 ORTHO05D006472 9.5e-20 100.9 175 48.6
Sp5g13430 Schrenkiella parvula HOM05D005335 ORTHO05D006472 9.5e-20 100.9 134 50.0
Sed0021893 Sechium edule HOM05D005335 ORTHO05D006472 9.5e-20 100.9 176 45.5
AL5G28000 Arabidopsis lyrata HOM05D005335 ORTHO05D006472 1.2e-19 100.5 181 44.2
MSTRG.11283 Avicennia marina HOM05D005335 ORTHO05D006472 1.2e-19 100.5 184 45.1
Oeu045458.1 Olea europaea HOM05D005335 ORTHO05D006472 1.2e-19 100.5 182 46.7
Oeu045459.1 Olea europaea HOM05D005335 ORTHO05D006472 1.2e-19 100.5 182 46.7
CiPaw.12G043300 Carya illinoinensis HOM05D005335 ORTHO05D006472 1.6e-19 100.1 164 47.6
Nitab4.5_0000514g0170 Nicotiana tabacum HOM05D005335 ORTHO05D006472 2.1e-19 99.8 178 46.6
Lj4g0005056 Lotus japonicus HOM05D005335 ORTHO05D006472 3.6e-19 99.0 163 47.9
EL10Ac5g11411 Beta vulgaris HOM05D005335 ORTHO05D006472 6.2e-19 98.2 142 48.6
Carub.0005s1474 Capsella rubella HOM05D005335 ORTHO05D006472 6.2e-19 98.2 187 43.3
Ciclev10032959m.g Citrus clementina HOM05D005335 ORTHO05D006472 8.1e-19 97.8 175 46.3
BcaB01g00799 Brassica carinata HOM05D005335 ORTHO05D006472 1.4e-18 97.1 186 43.5
Aa31LG4G17170 Aethionema arabicum HOM05D005335 ORTHO05D006472 1.8e-18 96.7 101 57.4
BcaC07g39341 Brassica carinata HOM05D005335 ORTHO05D006472 1.8e-18 96.7 183 45.4
C08p23580 Brassica napus HOM05D005335 ORTHO05D006472 1.8e-18 96.7 183 45.4
BolC8t49988H Brassica oleracea HOM05D005335 ORTHO05D006472 1.8e-18 96.7 183 45.4
Thhalv10010777m.g Eutrema salsugineum HOM05D005335 ORTHO05D006472 1.8e-18 96.7 173 45.1
Gohir.D07G055600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 1.8e-18 96.7 173 42.8
Gorai.001G058900 Gossypium raimondii HOM05D005335 ORTHO05D006472 1.8e-18 96.7 173 42.8
AT3G48550 Arabidopsis thaliana HOM05D005335 ORTHO05D006472 3.1e-18 95.9 182 44.0
Actinidia25571 Actinidia chinensis HOM05D005335 ORTHO05D006472 4.0e-18 95.5 116 62.1
Gohir.A07G051200 Gossypium hirsutum HOM05D005335 ORTHO05D006472 4.0e-18 95.5 173 43.4
CsaV3_1G000550 Cucumis sativus L. HOM05D005335 ORTHO05D006472 6.8e-18 94.7 171 43.9
Migut.I00507 Erythranthe guttata HOM05D005335 ORTHO05D006472 6.8e-18 94.7 178 43.8
Lalb_Chr13g0297231 Lupinus albus HOM05D005335 ORTHO05D006472 8.9e-18 94.4 174 45.4
PSO478G4723 Papaver somniferum HOM05D005335 ORTHO05D006472 8.9e-18 94.4 147 46.9
PGSC0003DMG400018091 Solanum tuberosum HOM05D005335 ORTHO05D006472 2.0e-17 93.2 168 44.0
Ah.04g153430 Amaranthus hybridus HOM05D005335 ORTHO05D006472 2.6e-17 92.8 138 46.4
CAN.G1305.23 Capsicum annuum HOM05D005335 ORTHO05D006472 2.6e-17 92.8 175 42.3
VMungo1215G0398 Vigna mungo HOM05D005335 ORTHO05D006472 2.6e-17 92.8 164 43.9
Ah.11g045430 Amaranthus hybridus HOM05D005335 ORTHO05D006472 3.4e-17 92.4 138 47.8
DCAR_007490 Daucus carota HOM05D005335 ORTHO05D006472 3.4e-17 92.4 178 43.8
Aqoxy5G03368 Aquilegia oxysepala HOM05D005335 ORTHO05D006472 5.8e-17 91.7 184 40.8
MD14G1156700 Malus domestica HOM05D005335 ORTHO05D006472 5.8e-17 91.7 171 43.3
Sopen03g032000 Solanum pennellii HOM05D005335 ORTHO05D006472 5.8e-17 91.7 177 42.9
HanXRQChr09g0273241 Helianthus annuus HOM05D005335 ORTHO05D006472 1.7e-16 90.1 185 42.7
Lsat_1_v5_gn_4_80981 Lactuca sativa HOM05D005335 ORTHO05D006472 2.2e-16 89.7 184 42.4
Solyc03g112920.1 Solanum lycopersicum HOM05D005335 ORTHO05D006472 2.2e-16 89.7 177 42.4
Lalb_Chr07g0183461 Lupinus albus HOM05D005335 ORTHO05D006472 2.9e-16 89.4 163 44.2
Psat4g066680 Pisum sativum HOM05D005335 ORTHO05D006472 2.9e-16 89.4 163 45.4
HPP92_009722 Vanilla planifolia HOM05D005335 ORTHO05D006472 2.9e-16 89.4 176 39.8
Oeu030248.1 Olea europaea HOM05D005335 ORTHO05D006472 3.8e-16 89.0 175 45.1
Sed0012251 Sechium edule HOM05D005335 ORTHO05D006472 3.8e-16 89.0 165 43.6
Medtr4g103250 Medicago truncatula HOM05D005335 ORTHO05D006472 6.4e-16 88.2 163 46.0
TPR.G19227 Trifolium pratense HOM05D005335 ORTHO05D006472 6.4e-16 88.2 163 44.8
AUR62029609 Chenopodium quinoa HOM05D005335 ORTHO05D006472 1.1e-15 87.4 143 46.2
PSO017G4217 Papaver somniferum HOM05D005335 ORTHO05D006472 1.9e-15 86.7 147 44.9
Glyma.17G130400 Glycine max HOM05D005335 ORTHO05D006472 2.4e-15 86.3 173 43.9
TWI23G0456 Tripterygium wilfordii HOM05D005335 ORTHO05D006472 3.2e-15 85.9 172 43.0
AUR62034828 Chenopodium quinoa HOM05D005335 ORTHO05D006472 4.2e-15 85.5 136 45.6
Manes.14G051200 Manihot esculenta HOM05D005335 ORTHO05D006472 5.4e-15 85.1 164 43.3
Ca_26102_v3 Cicer arietinum L. HOM05D005335 ORTHO05D006472 7.1e-15 84.7 163 42.3
Glyma.05G048500 Glycine max HOM05D005335 ORTHO05D006472 9.2e-15 84.3 180 42.8
HanXRQChr16g0498141 Helianthus annuus HOM05D005335 ORTHO05D006472 1.6e-14 83.6 182 39.0
CANSAT80G0357 Cannabis sativa HOM05D005335 ORTHO05D006472 4.6e-14 82.0 248 35.5
MBI11_g05328_MAGBIO Magnolia biondii HOM05D001420 ORTHO05D002488 4.6e-14 82.0 172 41.9
Oeu005014.1 Olea europaea HOM05D005335 ORTHO05D006472 4.6e-14 82.0 179 41.9
THA.LOC104821517 Tarenaya hassleriana HOM05D005335 ORTHO05D006472 4.6e-14 82.0 176 40.9
unitig_744.g24466 Utricularia gibba HOM05D005335 ORTHO05D006472 2.3e-13 79.7 169 39.6
Aqoxy3G00598 Aquilegia oxysepala HOM05D005335 ORTHO05D006472 3.0e-13 79.3 178 37.6
SGA_v2.0_scaffold161G37793 Striga asiatica HOM05D005335 ORTHO05D006472 5.1e-13 78.6 127 48.8
THA.LOC104818185 Tarenaya hassleriana HOM05D005335 ORTHO05D006472 5.6e-12 75.1 167 37.1
BcaC09g49876 Brassica carinata HOM05D005335 ORTHO05D006472 1.2e-11 73.9 169 39.1
Migut.D01260 Erythranthe guttata HOM05D005335 ORTHO05D006472 1.2e-11 73.9 190 40.0
GSVIVG01008545001 Vitis vinifera HOM05D005335 ORTHO05D006472 1.2e-11 73.9 96 52.1
CARHR157350 Cardamine hirsuta HOM05D005335 ORTHO05D006472 6.2e-11 71.6 116 49.1
SGA_v2.0_scaffold5G02870 Striga asiatica HOM05D005335 ORTHO05D006472 7.6e-09 64.7 173 35.3
C01p32260 Brassica napus HOM05D005335 ORTHO05D006472 2.9e-08 62.8 169 40.8
THA.LOC104798946 Tarenaya hassleriana HOM05D005335 ORTHO05D006472 4.9e-08 62.0 187 35.3
HanXRQChr05g0155191 Helianthus annuus HOM05D005335 ORTHO05D006472 9.3e-07 57.8 179 34.1


User provided reference genes

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