Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038517 Camellia sinensis var. sinensis HOM05D006618 ORTHO05D008291 8.5e-92 340.5 195 100.0
Hma1.2p1_0399F.1_g144140 Hydrangea macrophylla HOM05D006618 ORTHO05D008291 2.3e-52 209.5 200 63.0
vmacro02504 Vaccinium macrocarpon HOM05D006618 ORTHO05D008291 8.9e-49 197.6 253 52.2
Dinv33000 Davidia involucrata HOM05D006618 ORTHO05D008291 1.6e-45 186.8 184 61.4
CiPaw.08G099900 Carya illinoinensis HOM05D006618 ORTHO05D008291 2.7e-45 186.0 197 62.4
Peaxi162Scf01039g00026 Petunia axillaris HOM05D006618 ORTHO05D008291 1.0e-44 184.1 173 63.0
MSTRG.18188 Avicennia marina HOM05D006618 ORTHO05D008291 6.6e-44 181.4 191 59.2
Duzib211G0091 Durio zibethinus HOM05D006618 ORTHO05D008291 1.9e-43 179.9 193 57.0
Ah.08g212660 Amaranthus hybridus HOM05D006618 ORTHO05D008291 9.5e-43 177.6 168 66.7
Prupe.8G253400 Prunus persica HOM05D006618 ORTHO05D008291 1.2e-42 177.2 227 55.9
Manes.05G067500 Manihot esculenta HOM05D006618 ORTHO05D008291 2.8e-42 176.0 182 61.0
Hund18083 Selenicereus undatus HOM05D006618 ORTHO05D008291 3.6e-42 175.6 193 57.0
Aqoxy5G00606 Aquilegia oxysepala HOM05D006618 ORTHO05D008291 1.1e-41 174.1 191 55.5
Oeu057561.4 Olea europaea HOM05D006618 ORTHO05D008008 1.4e-41 173.7 167 62.3
Potri.014G134700 Populus trichocarpa HOM05D006618 ORTHO05D008291 2.4e-41 172.9 194 57.2
AUR62036645 Chenopodium quinoa HOM05D006618 ORTHO05D008291 4.0e-41 172.2 196 59.7
Sc17g0003540 Simmondsia chinensis HOM05D006618 ORTHO05D008291 5.2e-41 171.8 181 58.0
SGA_v2.0_scaffold11G05756 Striga asiatica HOM05D006618 ORTHO05D008291 5.2e-41 171.8 184 63.0
Cfa006056 Carpinus fangiana HOM05D006618 ORTHO05D008291 2.0e-40 169.9 196 53.6
Phvul.001G202800 Phaseolus vulgaris HOM05D006618 ORTHO05D008291 7.6e-40 167.9 177 57.1
Solyc06g084500.3 Solanum lycopersicum HOM05D006618 ORTHO05D008291 7.6e-40 167.9 164 61.0
PGR119G1443 Punica granatum HOM05D006618 ORTHO05D008291 1.3e-39 167.2 203 56.2
EL10Ac7g17390 Beta vulgaris HOM05D006618 ORTHO05D008291 2.9e-39 166.0 187 57.2
VMungo1383G0445 Vigna mungo HOM05D006618 ORTHO05D008291 3.8e-39 165.6 174 56.3
Haze_04826 Corylus avellana HOM05D006618 ORTHO05D008291 4.9e-39 165.2 236 47.5
PGSC0003DMG400024043 Solanum tuberosum HOM05D006618 ORTHO05D008291 6.4e-39 164.9 168 59.5
THA.LOC104801197 Tarenaya hassleriana HOM05D006618 ORTHO05D008291 2.4e-38 162.9 196 55.6
Glyma.03G209500 Glycine max HOM05D006618 ORTHO05D008291 4.1e-38 162.2 183 55.2
Medtr7g108100 Medicago truncatula HOM05D006618 ORTHO05D008291 4.1e-38 162.2 189 55.6
Lsat_1_v5_gn_9_4841 Lactuca sativa HOM05D006618 ORTHO05D008291 5.4e-38 161.8 193 54.9
Sopen06g035880 Solanum pennellii HOM05D006618 ORTHO05D008291 5.4e-38 161.8 166 59.6
Haze_04795 Corylus avellana HOM05D006618 ORTHO05D008291 1.6e-37 160.2 237 46.4
Glyma.19G206900 Glycine max HOM05D006618 ORTHO05D008291 2.1e-37 159.8 181 55.8
SalBow3G3170 Salvia bowleyana HOM05D006618 ORTHO05D008291 6.0e-37 158.3 174 58.6
Nitab4.5_0012299g0010 Nicotiana tabacum HOM05D006618 ORTHO05D008291 7.8e-37 157.9 191 55.0
Atru.chr5.1237 Acer truncatum HOM05D006618 ORTHO05D008291 1.7e-36 156.8 192 54.2
Carub.0006s3388 Capsella rubella HOM05D006618 ORTHO05D008291 1.7e-36 156.8 178 51.1
CAN.G1209.34 Capsicum annuum HOM05D006618 ORTHO05D008291 1.7e-36 156.8 193 51.8
Sabra14G0100400 Salix brachista HOM05D006618 ORTHO05D008291 3.0e-36 156.0 194 54.6
Lj1C37G5 Lonicera japonica HOM05D000143 ORTHO05D000072 5.1e-36 155.2 157 61.1
Ca_23188_v3 Cicer arietinum L. HOM05D006618 ORTHO05D008291 6.6e-36 154.8 165 61.8
QL12p024238 Quercus lobata HOM05D006618 ORTHO05D008291 6.6e-36 154.8 197 51.8
Sed0008392 Sechium edule HOM05D006618 ORTHO05D008291 8.6e-36 154.5 191 52.4
TAR362G0318 Trochodendron aralioides HOM05D006618 ORTHO05D008291 1.1e-35 154.1 195 51.8
Duzib138G1186 Durio zibethinus HOM05D006618 ORTHO05D008291 1.5e-35 153.7 189 57.1
Aa31LG5G2680 Aethionema arabicum HOM05D006618 ORTHO05D008291 1.9e-35 153.3 166 52.4
Thhalv10028994m.g Eutrema salsugineum HOM05D006618 ORTHO05D008291 1.9e-35 153.3 193 49.2
PSO170G6580 Papaver somniferum HOM05D006618 ORTHO05D008291 4.3e-35 152.1 193 52.8
BolC3t16012H Brassica oleracea HOM05D006618 ORTHO05D008291 7.3e-35 151.4 186 48.4
PSO210G2131 Papaver somniferum HOM05D006618 ORTHO05D008291 7.3e-35 151.4 193 52.3
COL.COLO4_08018 Corchorus olitorius HOM05D006618 ORTHO05D008291 9.6e-35 151.0 192 50.0
Nn3g21320 Nelumbo nucifera HOM05D006618 ORTHO05D008291 9.6e-35 151.0 154 60.4
ClCG09G006430 Citrullus lanatus HOM05D006618 ORTHO05D008291 1.2e-34 150.6 191 54.5
C03p37140 Brassica napus HOM05D006618 ORTHO05D008291 1.6e-34 150.2 189 48.7
AT4G03180 Arabidopsis thaliana HOM05D006618 ORTHO05D008291 2.8e-34 149.4 183 50.8
TPR.G32314 Trifolium pratense HOM05D006618 ORTHO05D008291 2.8e-34 149.4 186 57.0
Nitab4.5_0002093g0230 Nicotiana tabacum HOM05D006618 ORTHO05D008291 3.6e-34 149.1 175 56.0
AL6G49760 Arabidopsis lyrata HOM05D006618 ORTHO05D008291 4.7e-34 148.7 184 47.3
Eucgr.H01207 Eucalyptus grandis HOM05D006618 ORTHO05D008291 4.7e-34 148.7 163 63.2
MELO3C015900.2 Cucumis melo HOM05D006618 ORTHO05D008291 6.2e-34 148.3 204 51.5
MD11G1299100 Malus domestica HOM05D006618 ORTHO05D008291 6.2e-34 148.3 231 46.3
RcHm_v2.0_Chr6g0292701 Rosa chinensis HOM05D006618 ORTHO05D008291 6.2e-34 148.3 182 53.8
TWI12G0445 Tripterygium wilfordii HOM05D006618 ORTHO05D008291 6.2e-34 148.3 185 54.6
AUR62034630 Chenopodium quinoa HOM05D006618 ORTHO05D008291 8.1e-34 147.9 205 51.7
Rhsim13G0016600 Rhododendron simsii HOM05D006618 ORTHO05D008291 8.1e-34 147.9 160 62.5
Sed0009421 Sechium edule HOM05D006618 ORTHO05D008291 8.1e-34 147.9 199 47.7
Sp6g03210 Schrenkiella parvula HOM05D006618 ORTHO05D008291 1.1e-33 147.5 167 51.5
BcaC01g06702 Brassica carinata HOM05D006618 ORTHO05D008291 1.4e-33 147.1 189 47.6
Cc01_g20320 Coffea canephora HOM05D006618 ORTHO05D008291 1.8e-33 146.7 164 56.1
CARHR251610 Cardamine hirsuta HOM05D006618 ORTHO05D008291 2.4e-33 146.4 195 46.2
HanXRQChr15g0466141 Helianthus annuus HOM05D006618 ORTHO05D008291 2.4e-33 146.4 192 54.2
CsaV3_7G028720 Cucumis sativus L. HOM05D006618 ORTHO05D008291 3.1e-33 146.0 187 54.0
FvH4_2g24850 Fragaria vesca HOM05D006618 ORTHO05D008291 3.1e-33 146.0 189 50.8
FAN24G2031 Fragaria x ananassa HOM05D006618 ORTHO05D008291 3.1e-33 146.0 189 50.8
FAN27G1167 Fragaria x ananassa HOM05D006618 ORTHO05D008291 3.1e-33 146.0 189 50.3
Lj1g0015584 Lotus japonicus HOM05D006618 ORTHO05D008291 9.0e-33 144.4 175 50.9
Psat3g024440 Pisum sativum HOM05D006618 ORTHO05D008291 1.2e-32 144.1 195 52.8
ECA247G1808 Erigeron canadensis HOM05D006618 ORTHO05D008291 1.5e-32 143.7 166 57.2
BcaB05g23692 Brassica carinata HOM05D006618 ORTHO05D008291 2.6e-32 142.9 167 50.3
Gorai.007G131200 Gossypium raimondii HOM05D006618 ORTHO05D008291 5.8e-32 141.7 154 55.8
Thecc.01G291700 Theobroma cacao HOM05D006618 ORTHO05D008291 3.8e-31 139.0 193 49.7
MD03G1276600 Malus domestica HOM05D006618 ORTHO05D008291 4.9e-31 138.7 218 45.4
BcaB01g02511 Brassica carinata HOM05D006618 ORTHO05D008291 1.9e-30 136.7 166 54.2
Ciclev10022357m.g Citrus clementina HOM05D006618 ORTHO05D008291 1.9e-30 136.7 163 54.6
BcaC03g16213 Brassica carinata HOM05D006618 ORTHO05D008291 2.4e-30 136.3 183 50.3
BolC2t10017H Brassica oleracea HOM05D006618 ORTHO05D008291 2.4e-30 136.3 183 50.3
Lalb_Chr18g0047451 Lupinus albus HOM05D006618 ORTHO05D008291 2.4e-30 136.3 164 57.9
Zm00001eb410530 Zea mays HOM05D006618 ORTHO05D008291 2.4e-30 136.3 147 56.5
GSVIVG01010994001 Vitis vinifera HOM05D006618 ORTHO05D008291 7.1e-30 134.8 113 68.1
Gohir.A11G117500 Gossypium hirsutum HOM05D006618 ORTHO05D008291 2.7e-29 132.9 188 49.5
Actinidia24851 Actinidia chinensis HOM05D006618 ORTHO05D008291 1.0e-28 131.0 116 68.1
FAN15G0256 Fragaria x ananassa HOM05D006618 ORTHO05D008291 1.7e-28 130.2 189 47.6
C02p39890 Brassica napus HOM05D006618 ORTHO05D008291 2.3e-28 129.8 183 49.7
Migut.D00152 Erythranthe guttata HOM05D006618 ORTHO05D008291 6.6e-28 128.3 213 44.1
A02p25130 Brassica napus HOM05D006618 ORTHO05D008291 1.1e-27 127.5 183 48.6
BraA02t07501Z Brassica rapa HOM05D006618 ORTHO05D008291 1.9e-27 126.7 183 48.6
Zm00001eb137700 Zea mays HOM05D006618 ORTHO05D008291 2.5e-27 126.3 142 51.4
ATR0706G074 Amborella trichopoda HOM05D006618 ORTHO05D008291 3.3e-27 125.9 174 50.0
Os12g0538100 Oryza sativa ssp. japonica HOM05D006618 ORTHO05D008291 5.3e-25 118.6 155 49.7
MBI19_g13630_MAGBIO Magnolia biondii HOM05D006618 ORTHO05D008291 4.5e-24 115.5 198 46.5
unitig_22.g5246 Utricularia gibba HOM05D006618 ORTHO05D008291 7.6e-24 114.8 153 51.6
HPP92_017865 Vanilla planifolia HOM05D006618 ORTHO05D008291 2.9e-23 112.8 178 44.4
FAN20G2846 Fragaria x ananassa HOM05D006618 ORTHO05D008291 1.0e-20 104.4 164 45.1
arahy.Tifrunner.gnm1.ann1.160DKY Arachis hypogaea HOM05D006618 ORTHO05D008291 6.7e-20 101.7 143 49.7
Ca_09115_v3 Cicer arietinum L. HOM05D006618 ORTHO05D008291 6.7e-20 101.7 150 54.0
Actinidia21075 Actinidia chinensis HOM05D006618 ORTHO05D008291 7.4e-19 98.2 66 78.8
CANSAT25G1401 Cannabis sativa HOM05D006618 ORTHO05D008291 1.6e-18 97.1 193 45.1
Atru.chr5.1270 Acer truncatum HOM05D006618 ORTHO05D008291 1.2e-16 90.9 129 51.2
arahy.Tifrunner.gnm1.ann1.1H6IZY Arachis hypogaea HOM05D006618 ORTHO05D008291 2.6e-16 89.7 143 44.8
BcaB05g22921 Brassica carinata HOM05D001082 ORTHO05D008291 4.9e-15 85.5 159 42.1
THA.LOC104827373 Tarenaya hassleriana HOM05D006618 ORTHO05D008291 4.9e-15 85.5 123 48.0
arahy.Tifrunner.gnm1.ann1.915FC2 Arachis hypogaea HOM05D006618 ORTHO05D008291 3.2e-14 82.8 173 41.0
arahy.Tifrunner.gnm1.ann1.MTA467 Arachis hypogaea HOM05D006618 ORTHO05D008291 9.3e-14 81.3 145 45.5
Gohir.D11G122400 Gossypium hirsutum HOM05D006618 ORTHO05D008291 1.6e-13 80.5 126 41.3
SHI15557 Sapria himalayana HOM05D006618 ORTHO05D008291 1.6e-13 80.5 92 55.4
Cfa006024 Carpinus fangiana HOM05D006618 ORTHO05D008291 1.6e-10 70.5 70 50.0
Mapoly0001s0215 Marchantia polymorpha HOM05D006618 ORTHO05D008291 4.0e-09 65.9 224 35.7
SEGI_31360 Sequoiadendron giganteum HOM05D006618 ORTHO05D008291 1.3e-07 60.8 47 70.2
AagrBONN_evm.TU.Sc2ySwM_117.1999 Anthoceros agrestis HOM05D006618 ORTHO05D008291 1.4e-06 57.4 59 52.5
Pp3c9_10530 Physcomitrium patens HOM05D006618 ORTHO05D008291 1.9e-06 57.0 218 28.9
Cpa.g.sc9.172 Carica papaya HOM05D006618 ORTHO05D008291 9.3e-06 54.7 34 70.6


User provided reference genes

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