Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038510 Camellia sinensis var. sinensis HOM05D007511 ORTHO05D003753 1.6e-69 266.2 150 100.0
vmacro13587 Vaccinium macrocarpon HOM05D007511 ORTHO05D003753 8.4e-31 137.5 156 53.2
Rhsim07G0046200 Rhododendron simsii HOM05D007511 ORTHO05D003753 4.0e-25 118.6 126 54.0
Rhsim01G0134200 Rhododendron simsii HOM05D007511 ORTHO05D003753 1.0e-20 104.0 164 43.9
Rhsim01G0134700 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.3e-20 102.8 164 43.3
Oeu032775.1 Olea europaea HOM05D007511 ORTHO05D003753 2.5e-19 99.4 147 42.9
Sopen10g009620 Solanum pennellii HOM05D007511 ORTHO05D025904 9.7e-19 97.4 151 41.7
Nitab4.5_0004800g0110 Nicotiana tabacum HOM05D000001 ORTHO05D011953 1.4e-17 93.6 162 42.0
Oeu024951.1 Olea europaea HOM05D007511 ORTHO05D003753 5.3e-17 91.7 147 40.8
Hma1.2p1_0915F.1_g236420 Hydrangea macrophylla HOM05D007511 ORTHO05D003753 9.0e-17 90.9 168 41.1
Solyc10g024480.1 Solanum lycopersicum HOM05D007511 ORTHO05D003753 9.0e-17 90.9 151 40.4
PGSC0003DMG400043768 Solanum tuberosum HOM05D007511 ORTHO05D003753 5.9e-16 88.2 145 42.1
Peaxi162Scf01343g00114 Petunia axillaris HOM05D007511 ORTHO05D003753 2.2e-15 86.3 162 38.3
Sopen01g032800 Solanum pennellii HOM05D007511 ORTHO05D003753 8.5e-15 84.3 142 40.1
Migut.B01440 Erythranthe guttata HOM05D007511 ORTHO05D003753 1.9e-14 83.2 95 45.3
HanXRQChr04g0119711 Helianthus annuus HOM05D007511 ORTHO05D003753 3.2e-14 82.4 70 58.6
SGA_v2.0_scaffold5G03086 Striga asiatica HOM05D007511 ORTHO05D003753 9.3e-14 80.9 105 41.0
Lsat_1_v5_gn_7_35641 Lactuca sativa HOM05D007511 ORTHO05D003753 8.8e-12 74.3 68 54.4
Hma1.2p1_0353F.1_g133330 Hydrangea macrophylla HOM05D007511 ORTHO05D003753 3.7e-10 68.9 150 35.3
MD07G1077000 Malus domestica HOM05D007511 ORTHO05D003753 4.8e-10 68.6 74 44.6
MD02G1239600 Malus domestica HOM05D007511 ORTHO05D003753 2.4e-09 66.2 71 49.3
RcHm_v2.0_Chr1g0337051 Rosa chinensis HOM05D007511 ORTHO05D003753 9.1e-09 64.3 68 45.6
Gohir.A11G221900 Gossypium hirsutum HOM05D007511 ORTHO05D003753 1.5e-08 63.5 129 31.8
Migut.N01683 Erythranthe guttata HOM05D007511 ORTHO05D003753 2.0e-08 63.2 70 51.4
Gohir.D11G235550 Gossypium hirsutum HOM05D007511 ORTHO05D003753 2.0e-08 63.2 71 39.4
Peaxi162Scf00245g00034 Petunia axillaris HOM05D030085 ORTHO05D025904 2.0e-08 63.2 123 36.6
Manes.08G158000 Manihot esculenta HOM05D007511 ORTHO05D003753 3.4e-08 62.4 71 39.4
TWI60G1247 Tripterygium wilfordii HOM05D007511 ORTHO05D003753 3.4e-08 62.4 63 44.4
FAN10G2279 Fragaria x ananassa HOM05D001937 ORTHO05D007024 5.9e-08 61.6 72 41.7
Gorai.007G248300 Gossypium raimondii HOM05D007511 ORTHO05D003753 7.7e-08 61.2 129 31.0
FAN01G1810 Fragaria x ananassa HOM05D007511 ORTHO05D003753 1.0e-07 60.8 67 41.8
Prupe.2G098000 Prunus persica HOM05D007511 ORTHO05D003753 1.0e-07 60.8 67 38.8
CANSAT35G2046 Cannabis sativa HOM05D007511 ORTHO05D003753 1.3e-07 60.5 68 39.7
CsaV3_2G011030 Cucumis sativus L. HOM05D007511 ORTHO05D003753 1.3e-07 60.5 67 43.3
FvH4_7g07110 Fragaria vesca HOM05D007511 ORTHO05D003753 1.3e-07 60.5 67 41.8
FAN06G3938 Fragaria x ananassa HOM05D007511 ORTHO05D003753 1.3e-07 60.5 67 41.8
Sabra19G0054300 Salix brachista HOM05D007511 ORTHO05D003753 1.3e-07 60.5 74 41.9
SalBow4G0080 Salvia bowleyana HOM05D007511 ORTHO05D003753 1.3e-07 60.5 72 43.1
SalBow4G2364 Salvia bowleyana HOM05D007511 ORTHO05D003753 1.3e-07 60.5 72 43.1
CiPaw.02G046500 Carya illinoinensis HOM05D007511 ORTHO05D003753 1.7e-07 60.1 175 30.3
MBI06_g35216_MAGBIO Magnolia biondii HOM05D007511 ORTHO05D003753 1.7e-07 60.1 63 41.3
FAN03G1709 Fragaria x ananassa HOM05D007511 ORTHO05D003753 2.2e-07 59.7 67 40.3
Nn1g09148 Nelumbo nucifera HOM05D007511 ORTHO05D003753 2.2e-07 59.7 68 41.2
SGA_v2.0_scaffold95G28750 Striga asiatica HOM05D007511 ORTHO05D003753 2.9e-07 59.3 146 30.8
Atru.chr2.1724 Acer truncatum HOM05D007511 ORTHO05D003753 6.5e-07 58.2 63 42.9
Cpa.g.sc73.86 Carica papaya HOM05D007511 ORTHO05D003753 6.5e-07 58.2 68 33.8
Ciclev10033674m.g Citrus clementina HOM05D007511 ORTHO05D003753 6.5e-07 58.2 63 41.3
TWI34G0987 Tripterygium wilfordii HOM05D007511 ORTHO05D003753 6.5e-07 58.2 61 44.3
Duzib128G1432 Durio zibethinus HOM05D007511 ORTHO05D003753 1.1e-06 57.4 117 30.8
Lalb_Chr07g0194541 Lupinus albus HOM05D007511 ORTHO05D003753 1.1e-06 57.4 64 37.5
TAR625G0656 Trochodendron aralioides HOM05D001418 ORTHO05D003753 1.1e-06 57.4 63 47.6
Nn3g19224 Nelumbo nucifera HOM05D007511 ORTHO05D003753 1.4e-06 57.0 72 40.3
Potri.019G043701 Populus trichocarpa HOM05D007511 ORTHO05D003753 2.5e-06 56.2 168 29.8


User provided reference genes

Program Settings