Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038497 Camellia sinensis var. sinensis HOM05D032456 ORTHO05D111136 3.2e-32 141.0 64 100.0
CSS0032286 Camellia sinensis var. sinensis HOM05D032456 ORTHO05D110395 3.6e-23 110.9 66 80.3
CSS0006126 Camellia sinensis var. sinensis HOM05D032456 ORTHO05D112149 4.0e-22 107.5 85 67.1
CSS0030828 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D001445 1.3e-09 65.9 38 76.3
CSS0033161 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D001445 1.3e-09 65.9 38 76.3
CSS0016797 Camellia sinensis var. sinensis HOM05D004338 ORTHO05D005205 1.5e-08 62.4 34 82.4
CSS0018877 Camellia sinensis var. sinensis HOM05D004338 ORTHO05D005205 1.5e-08 62.4 34 82.4
CSS0047496 Camellia sinensis var. sinensis HOM05D004338 ORTHO05D005205 1.5e-08 62.4 34 82.4
Cpa.g.sc159.8 Carica papaya HOM05D000434 ORTHO05D001445 1.2e-07 59.3 41 63.4
Hma1.2p1_1092F.1_g255920 Hydrangea macrophylla HOM05D000434 ORTHO05D001445 1.6e-07 58.9 43 62.8
Dinv38517 Davidia involucrata HOM05D000434 ORTHO05D001445 2.8e-07 58.2 38 65.8
THA.LOC104822549 Tarenaya hassleriana HOM05D000434 ORTHO05D001445 2.8e-07 58.2 38 68.4
ClCG03G003140 Citrullus lanatus HOM05D000434 ORTHO05D001445 3.6e-07 57.8 35 68.6
MELO3C002313.2 Cucumis melo HOM05D000434 ORTHO05D001445 4.7e-07 57.4 38 65.8
CsaV3_1G009040 Cucumis sativus L. HOM05D000434 ORTHO05D001445 4.7e-07 57.4 38 65.8
Lj9A441T90 Lonicera japonica HOM05D000434 ORTHO05D001445 4.7e-07 57.4 35 68.6
Rhsim12G0168700 Rhododendron simsii HOM05D000434 ORTHO05D001445 4.7e-07 57.4 38 68.4
Sed0009577 Sechium edule HOM05D000434 ORTHO05D001445 4.7e-07 57.4 38 65.8
vmacro16650 Vaccinium macrocarpon HOM05D000434 ORTHO05D001445 4.7e-07 57.4 38 65.8
vmacro22880 Vaccinium macrocarpon HOM05D000434 ORTHO05D001445 4.7e-07 57.4 38 65.8
CSS0000736 Camellia sinensis var. sinensis HOM05D004338 ORTHO05D005205 8.1e-07 56.6 34 76.5
A01p16060 Brassica napus HOM05D000434 ORTHO05D005992 1.1e-06 56.2 68 47.1
C01p20050 Brassica napus HOM05D000434 ORTHO05D001445 1.1e-06 56.2 68 47.1
BolC1t01932H Brassica oleracea HOM05D000434 ORTHO05D001445 1.1e-06 56.2 68 47.1
Ah.08g218680 Amaranthus hybridus HOM05D000434 ORTHO05D001445 1.4e-06 55.8 38 63.2
DCAR_016445 Daucus carota HOM05D000434 ORTHO05D001445 1.4e-06 55.8 38 68.4
Carub.0007s1632 Capsella rubella HOM05D000434 ORTHO05D001445 1.8e-06 55.5 38 65.8
BraA01t01541Z Brassica rapa HOM05D000434 ORTHO05D001445 3.1e-06 54.7 68 47.1
GSVIVG01007619001 Vitis vinifera HOM05D000434 ORTHO05D001445 3.1e-06 54.7 39 66.7
AL7G28450 Arabidopsis lyrata HOM05D000434 ORTHO05D001445 4.0e-06 54.3 38 65.8
Cc04_g11320 Coffea canephora HOM05D000434 ORTHO05D001445 5.2e-06 53.9 32 71.9
CiPaw.12G032400 Carya illinoinensis HOM05D000434 ORTHO05D001445 6.8e-06 53.5 38 63.2
Aa31LG7G11110 Aethionema arabicum HOM05D000434 ORTHO05D001445 8.9e-06 53.1 38 63.2
AUR62022127 Chenopodium quinoa HOM05D000434 ORTHO05D001445 8.9e-06 53.1 38 60.5
FvH4_5g06570 Fragaria vesca HOM05D000434 ORTHO05D001445 8.9e-06 53.1 38 65.8
FAN08G0959 Fragaria x ananassa HOM05D000434 ORTHO05D001445 8.9e-06 53.1 38 65.8
FAN13G3112 Fragaria x ananassa HOM05D000434 ORTHO05D001445 8.9e-06 53.1 38 65.8
FAN18G2892 Fragaria x ananassa HOM05D000434 ORTHO05D001445 8.9e-06 53.1 38 65.8
RcHm_v2.0_Chr7g0192261 Rosa chinensis HOM05D000434 ORTHO05D001445 8.9e-06 53.1 38 65.8
Sp7g22720 Schrenkiella parvula HOM05D000434 ORTHO05D001445 8.9e-06 53.1 38 63.2


User provided reference genes

Program Settings