Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038484 Camellia sinensis var. sinensis HOM05D020260 ORTHO05D022112 1.9e-44 182.2 96 100.0
CSS0031745 Camellia sinensis var. sinensis HOM05D020260 ORTHO05D022112 1.5e-41 172.6 96 94.8
CSS0045402 Camellia sinensis var. sinensis HOM05D020260 ORTHO05D022112 2.6e-41 171.8 96 94.8
CSS0016153 Camellia sinensis var. sinensis HOM05D005129 ORTHO05D005585 4.6e-30 134.4 108 72.2
CSS0017240 Camellia sinensis var. sinensis HOM05D020260 ORTHO05D022112 2.3e-29 132.1 96 76.0
CSS0002641 Camellia sinensis var. sinensis HOM05D020260 ORTHO05D022112 6.6e-29 130.6 96 75.0
CSS0010685 Camellia sinensis var. sinensis HOM05D020260 ORTHO05D022112 9.5e-28 126.7 96 74.0
Dinv27170 Davidia involucrata HOM05D005129 ORTHO05D005585 3.3e-20 101.7 117 53.0
Rhsim06G0213800 Rhododendron simsii HOM05D005129 ORTHO05D005585 1.0e-13 80.1 114 49.1
vmacro03361 Vaccinium macrocarpon HOM05D005129 ORTHO05D005585 5.6e-12 74.3 109 47.7
Rhsim03G0093400 Rhododendron simsii HOM05D005129 ORTHO05D005585 4.7e-11 71.2 112 47.3
GSVIVG01035592001 Vitis vinifera HOM05D005129 ORTHO05D005585 7.6e-09 63.9 117 43.6
ClCG03G008270 Citrullus lanatus HOM05D005129 ORTHO05D005585 1.3e-08 63.2 95 46.3
Cfa000799 Carpinus fangiana HOM05D005129 ORTHO05D005585 2.9e-08 62.0 112 41.1
Haze_05902 Corylus avellana HOM05D005129 ORTHO05D005585 8.4e-08 60.5 112 40.2
Cc09_g07500 Coffea canephora HOM05D005129 ORTHO05D005585 1.9e-07 59.3 115 35.7
Sabra11G0141700 Salix brachista HOM05D005129 ORTHO05D005585 3.2e-07 58.5 112 39.3
CsaV3_1G037120 Cucumis sativus L. HOM05D005129 ORTHO05D005585 9.3e-07 57.0 118 37.3
Sed0027997 Sechium edule HOM05D005129 ORTHO05D005585 1.2e-06 56.6 82 46.3
Potri.011G161901 Populus trichocarpa HOM05D005129 ORTHO05D005585 2.7e-06 55.5 112 38.4
Manes.06G058900 Manihot esculenta HOM05D005129 ORTHO05D005585 7.8e-06 53.9 63 47.6


User provided reference genes

Program Settings