Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038482 Camellia sinensis var. sinensis HOM05D006671 ORTHO05D008637 7.3e-311 1069.7 533 100.0
Rhsim08G0246200 Rhododendron simsii HOM05D006671 ORTHO05D008637 1.3e-235 819.7 548 75.7
vmacro18708 Vaccinium macrocarpon HOM05D006671 ORTHO05D008637 5.0e-235 817.8 542 75.3
Actinidia24409 Actinidia chinensis HOM05D006671 ORTHO05D008637 1.6e-220 769.6 500 76.4
TAR623G0926 Trochodendron aralioides HOM05D006671 ORTHO05D008637 2.5e-210 735.7 535 68.0
Thecc.06G048900 Theobroma cacao HOM05D006671 ORTHO05D008637 1.2e-207 726.9 535 67.9
Atru.chr1.4182 Acer truncatum HOM05D006671 ORTHO05D008637 2.7e-204 715.7 531 67.4
COL.COLO4_26801 Corchorus olitorius HOM05D006671 ORTHO05D008637 3.8e-203 711.8 534 66.5
TPR.G26443 Trifolium pratense HOM05D006671 ORTHO05D008637 6.1e-201 704.5 532 66.7
Duzib160G0342 Durio zibethinus HOM05D006671 ORTHO05D008637 8.0e-201 704.1 535 64.9
Nn8g41287 Nelumbo nucifera HOM05D006671 ORTHO05D008637 2.3e-200 702.6 535 64.3
CiPaw.03G010100 Carya illinoinensis HOM05D006671 ORTHO05D008637 3.0e-200 702.2 544 65.3
MD09G1171100 Malus domestica HOM05D006671 ORTHO05D008637 1.5e-199 699.9 530 65.1
CAN.G390.42 Capsicum annuum HOM05D006671 ORTHO05D008637 2.2e-198 696.0 533 65.1
Manes.11G010600 Manihot esculenta HOM05D006671 ORTHO05D008637 4.9e-198 694.9 537 64.6
PGSC0003DMG402028844 Solanum tuberosum HOM05D006671 ORTHO05D008637 1.8e-197 693.0 535 65.8
Lj5C27T5 Lonicera japonica HOM05D006671 ORTHO05D008637 7.0e-197 691.0 501 68.9
DCAR_007665 Daucus carota HOM05D006671 ORTHO05D008637 9.2e-197 690.6 556 61.3
Gohir.D13G119900 Gossypium hirsutum HOM05D006671 ORTHO05D008637 9.2e-197 690.6 536 63.8
Prupe.3G029600 Prunus persica HOM05D006671 ORTHO05D008637 9.2e-197 690.6 530 64.7
Cc04_g00530 Coffea canephora HOM05D006671 ORTHO05D008637 5.9e-196 688.0 535 63.9
Sopen12g024210 Solanum pennellii HOM05D006671 ORTHO05D008637 1.3e-195 686.8 535 64.3
ECA234G0268 Erigeron canadensis HOM05D006671 ORTHO05D008637 2.3e-195 686.0 532 64.5
Glyma.07G047100 Glycine max HOM05D006671 ORTHO05D008637 5.0e-195 684.9 538 64.3
Solyc12g055740.2 Solanum lycopersicum HOM05D006671 ORTHO05D008637 5.0e-195 684.9 535 64.3
Gorai.013G134300 Gossypium raimondii HOM05D006671 ORTHO05D008637 8.6e-195 684.1 540 63.1
Potri.001G161100 Populus trichocarpa HOM05D006671 ORTHO05D008637 1.9e-194 682.9 533 64.0
Glyma.16G015100 Glycine max HOM05D006671 ORTHO05D008637 9.5e-194 680.6 541 63.2
Phvul.010G121800 Phaseolus vulgaris HOM05D006671 ORTHO05D008637 9.5e-194 680.6 538 63.6
Psat4g165440 Pisum sativum HOM05D006671 ORTHO05D008637 2.1e-193 679.5 532 64.8
SalBow7G2314 Salvia bowleyana HOM05D006671 ORTHO05D008637 2.1e-193 679.5 534 62.4
Lalb_Chr10g0101031 Lupinus albus HOM05D006671 ORTHO05D008637 4.7e-193 678.3 539 63.8
Ciclev10025368m.g Citrus clementina HOM05D006671 ORTHO05D008637 8.9e-192 674.1 531 64.0
RcHm_v2.0_Chr2g0148251 Rosa chinensis HOM05D006671 ORTHO05D008637 1.3e-190 670.2 532 64.7
Lj3g0013980 Lotus japonicus HOM05D006671 ORTHO05D008637 2.2e-190 669.5 545 62.4
PGSC0003DMG401028844 Solanum tuberosum HOM05D006671 ORTHO05D008637 2.2e-190 669.5 535 64.3
Eucgr.I02172 Eucalyptus grandis HOM05D006671 ORTHO05D008637 6.4e-190 667.9 531 62.7
TWI59G0357 Tripterygium wilfordii HOM05D006671 ORTHO05D008637 7.0e-189 664.5 532 63.3
Migut.D00903 Erythranthe guttata HOM05D006671 ORTHO05D008637 9.2e-189 664.1 538 59.7
MSTRG.9549 Avicennia marina HOM05D006671 ORTHO05D008637 3.5e-188 662.1 534 61.8
CANSAT56G3116 Cannabis sativa HOM05D006671 ORTHO05D008637 4.6e-188 661.8 532 62.8
Medtr8g023620 Medicago truncatula HOM05D006671 ORTHO05D008637 4.6e-188 661.8 534 62.7
Aqoxy2G04033 Aquilegia oxysepala HOM05D006671 ORTHO05D008637 6.0e-188 661.4 534 60.9
HanXRQChr10g0311581 Helianthus annuus HOM05D006671 ORTHO05D008637 1.7e-187 659.8 532 64.1
Actinidia33812 Actinidia chinensis HOM05D006671 ORTHO05D008637 8.0e-185 651.0 530 65.5
PSO017G0187 Papaver somniferum HOM05D006671 ORTHO05D008637 8.9e-184 647.5 539 63.5
Sc12g0010960 Simmondsia chinensis HOM05D006671 ORTHO05D008637 8.9e-184 647.5 534 59.9
GSVIVG01026409001 Vitis vinifera HOM05D006671 ORTHO05D008637 3.4e-183 645.6 757 48.0
Haze_14039 Corylus avellana HOM05D006671 ORTHO05D008637 1.1e-181 640.6 633 56.9
PGR119G0898 Punica granatum HOM05D006671 ORTHO05D008637 1.0e-179 634.0 536 58.2
SGA_v2.0_scaffold4G02101 Striga asiatica HOM05D006671 ORTHO05D008637 1.7e-179 633.3 540 59.3
Aa31LG10G1550 Aethionema arabicum HOM05D006671 ORTHO05D008637 8.6e-179 630.9 530 59.8
Sp1g40250 Schrenkiella parvula HOM05D006671 ORTHO05D008637 2.5e-178 629.4 530 58.3
FvH4_6g36250 Fragaria vesca HOM05D006671 ORTHO05D008637 4.3e-178 628.6 528 61.4
FAN14G1234 Fragaria x ananassa HOM05D006671 ORTHO05D008637 9.5e-178 627.5 528 61.2
BraA08t32194Z Brassica rapa HOM05D006671 ORTHO05D008637 2.8e-177 625.9 530 58.1
BcaB04g17063 Brassica carinata HOM05D006671 ORTHO05D008637 6.2e-177 624.8 530 58.3
Lsat_1_v5_gn_5_137600 Lactuca sativa HOM05D006671 ORTHO05D008637 6.2e-177 624.8 521 61.4
BcaC01g01410 Brassica carinata HOM05D006671 ORTHO05D008637 8.1e-177 624.4 526 58.6
A08p01430 Brassica napus HOM05D006671 ORTHO05D008637 8.1e-177 624.4 530 58.1
C03p91740 Brassica napus HOM05D006671 ORTHO05D008637 3.1e-176 622.5 526 58.4
BolC3t21495H Brassica oleracea HOM05D006671 ORTHO05D008637 4.0e-176 622.1 529 57.8
Thhalv10011378m.g Eutrema salsugineum HOM05D006671 ORTHO05D008637 4.0e-176 622.1 530 57.7
Sabra01G0131200 Salix brachista HOM05D006671 ORTHO05D008637 6.8e-176 621.3 574 56.8
AT1G53710 Arabidopsis thaliana HOM05D006671 ORTHO05D008637 1.5e-175 620.2 529 57.5
Carub.0001s4299 Capsella rubella HOM05D006671 ORTHO05D008637 1.5e-175 620.2 529 56.9
EL10Ac7g18235 Beta vulgaris HOM05D006671 ORTHO05D008637 7.5e-175 617.8 530 58.7
MBI13_g05970_MAGBIO Magnolia biondii HOM05D006671 ORTHO05D008637 4.1e-173 612.1 482 64.3
arahy.Tifrunner.gnm1.ann1.NMV212 Arachis hypogaea HOM05D006671 ORTHO05D008637 9.2e-173 610.9 534 58.8
CARHR044010 Cardamine hirsuta HOM05D006671 ORTHO05D008637 2.1e-172 609.8 530 56.2
AL1G62410 Arabidopsis lyrata HOM05D006671 ORTHO05D008637 4.6e-172 608.6 532 56.0
arahy.Tifrunner.gnm1.ann1.YS0GDU Arachis hypogaea HOM05D006671 ORTHO05D008637 1.0e-171 607.4 534 58.4
FAN09G2187 Fragaria x ananassa HOM05D006671 ORTHO05D008637 1.9e-170 603.2 528 59.5
Os03g0397300 Oryza sativa ssp. japonica HOM05D006671 ORTHO05D008637 1.6e-169 600.1 530 57.7
HPP92_002242 Vanilla planifolia HOM05D006671 ORTHO05D008637 2.4e-168 596.3 530 58.1
Cpa.g.sc229.10 Carica papaya HOM05D006671 ORTHO05D008637 2.2e-166 589.7 534 56.7
Dinv20369 Davidia involucrata HOM05D006671 ORTHO05D008637 3.8e-166 589.0 367 76.6
Nitab4.5_0000357g0220 Nicotiana tabacum HOM05D006671 ORTHO05D008637 1.7e-163 580.1 533 57.2
Zm00001eb392730 Zea mays HOM05D006671 ORTHO05D008637 1.1e-162 577.4 530 56.4
FAN14G2634 Fragaria x ananassa HOM05D006671 ORTHO05D008637 1.3e-161 573.9 528 58.5
AUR62001377 Chenopodium quinoa HOM05D006671 ORTHO05D008637 8.1e-161 571.2 503 57.5
PSO170G0973 Papaver somniferum HOM05D006671 ORTHO05D008637 5.3e-160 568.5 476 61.8
Ah.08g217540 Amaranthus hybridus HOM05D006671 ORTHO05D008637 4.4e-159 565.5 531 56.3
AUR62044064 Chenopodium quinoa HOM05D006671 ORTHO05D008637 3.5e-156 555.8 473 59.2
CDE06G0010 Ceratophyllum demersum HOM05D006671 ORTHO05D008637 1.9e-154 550.1 479 58.7
unitig_699.g19656 Utricularia gibba HOM05D006671 ORTHO05D001254 1.1e-152 544.3 535 52.0
Nitab4.5_0003469g0010 Nicotiana tabacum HOM05D006671 ORTHO05D008637 2.6e-151 539.7 544 53.9
Peaxi162Scf00177g00616 Petunia axillaris HOM05D006671 ORTHO05D008637 4.8e-145 518.8 533 52.5
SEGI_35568 Sequoiadendron giganteum HOM05D006671 ORTHO05D008637 1.5e-135 487.3 438 55.5
Pp3c21_8010 Physcomitrium patens HOM05D006671 ORTHO05D008637 6.9e-120 435.3 536 44.0
Ca_23471_v3 Cicer arietinum L. HOM05D006671 ORTHO05D008637 5.1e-115 419.1 471 51.2
AagrBONN_evm.TU.Sc2ySwM_362.1979 Anthoceros agrestis HOM05D006671 ORTHO05D008637 8.8e-115 418.3 533 42.8
SMO347G0345 Selaginella moellendorffii HOM05D006671 ORTHO05D008637 4.8e-113 412.5 535 42.1
THA.LOC104822767 Tarenaya hassleriana HOM05D006671 ORTHO05D008637 1.5e-109 401.0 377 52.8
Hma1.2p1_1104F.1_g257490 Hydrangea macrophylla HOM05D006671 ORTHO05D008637 9.4e-109 398.3 259 72.6
VMungo0331G0057 Vigna mungo HOM05D006671 ORTHO05D008637 4.1e-104 382.9 293 63.5
QL03p047059 Quercus lobata HOM05D006671 ORTHO05D008637 1.4e-99 367.9 257 70.4
Hma1.2p1_1104F.1_g257500 Hydrangea macrophylla HOM05D006671 ORTHO05D008637 4.8e-97 359.4 268 67.9
Oeu006761.2 Olea europaea HOM05D006671 ORTHO05D008637 1.6e-95 354.4 282 61.0
QL03p047068 Quercus lobata HOM05D006671 ORTHO05D008637 4.5e-95 352.8 280 64.6
Mapoly0048s0109 Marchantia polymorpha HOM05D006671 ORTHO05D008637 1.1e-88 331.6 534 36.0
Gohir.A13G116801 Gossypium hirsutum HOM05D006671 ORTHO05D008637 4.9e-81 306.2 258 63.2
BcaNung02916 Brassica carinata HOM05D006671 ORTHO05D008637 7.8e-79 298.9 498 39.6
FAN02G1271 Fragaria x ananassa HOM05D006671 ORTHO05D008637 1.2e-76 291.6 310 51.9
Actinidia21851 Actinidia chinensis HOM05D006671 ORTHO05D008637 1.4e-72 278.1 193 74.6
Gohir.A13G116750 Gossypium hirsutum HOM05D006671 ORTHO05D008637 2.0e-71 274.2 201 64.7
MD17G1156100 Malus domestica HOM05D006671 ORTHO05D008637 1.1e-69 268.5 441 39.7
SEGI_04788 Sequoiadendron giganteum HOM05D006671 ORTHO05D008637 1.3e-65 255.0 278 51.1
ATR0006G018 Amborella trichopoda HOM05D006671 ORTHO05D008637 1.7e-65 254.6 274 50.7
THA.LOC104803433 Tarenaya hassleriana HOM05D006671 ORTHO05D008637 1.2e-55 221.9 178 60.7
Actinidia21852 Actinidia chinensis HOM05D006671 ORTHO05D008637 1.9e-45 188.0 123 71.5
MCO09G741 Micromonas commoda HOM05D006671 ORTHO05D008637 3.5e-39 167.2 427 31.4
Hund05690 Selenicereus undatus HOM05D006671 ORTHO05D008637 6.0e-39 166.4 124 66.1
HPP92_002174 Vanilla planifolia HOM05D000872 ORTHO05D007886 1.7e-38 164.9 284 38.7
FAN05G4676 Fragaria x ananassa HOM05D006671 ORTHO05D008637 2.6e-26 124.4 112 59.8
Cfa022026 Carpinus fangiana HOM05D002393 ORTHO05D123579 1.2e-23 115.5 480 26.2
Lsat_1_v5_gn_2_122021 Lactuca sativa HOM05D006671 ORTHO05D008637 1.8e-22 111.7 140 47.1
CSS0027715 Camellia sinensis var. sinensis HOM05D006671 ORTHO05D008637 1.3e-14 85.5 42 83.3
BcaC09g48416 Brassica carinata HOM05D006671 ORTHO05D027459 3.9e-14 84.0 120 41.7
C01p50010 Brassica napus HOM05D010519 ORTHO05D027459 3.9e-14 84.0 120 41.7
BolC1t04958H Brassica oleracea HOM05D010519 ORTHO05D027459 3.9e-14 84.0 120 41.7
Lsat_1_v5_gn_2_91241 Lactuca sativa HOM05D006671 ORTHO05D011576 1.9e-13 81.6 83 51.8
Lsat_1_v5_gn_1_119700 Lactuca sativa HOM05D006671 ORTHO05D011576 2.8e-12 77.8 83 49.4
Pp3c20_15640 Physcomitrium patens HOM05D008167 ORTHO05D010296 2.5e-08 64.7 372 22.3
Manes.02G154800 Manihot esculenta HOM05D008167 ORTHO05D010296 4.6e-07 60.5 336 24.1
ATR0006G056 Amborella trichopoda HOM05D006671 ORTHO05D008637 3.0e-06 57.8 61 47.5


User provided reference genes

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