Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038475 Camellia sinensis var. sinensis HOM05D005517 ORTHO05D006760 5.9e-30 133.7 73 100.0
Dinv33325 Davidia involucrata HOM05D005517 ORTHO05D006760 1.5e-25 119.0 73 87.7
Hma1.2p1_1057F.1_g252720 Hydrangea macrophylla HOM05D005517 ORTHO05D006760 2.6e-25 118.2 73 90.4
Dinv25651 Davidia involucrata HOM05D005517 ORTHO05D006760 3.4e-25 117.9 73 86.3
Rhsim08G0041900 Rhododendron simsii HOM05D005517 ORTHO05D006760 5.7e-25 117.1 73 87.7
vmacro22457 Vaccinium macrocarpon HOM05D005517 ORTHO05D006760 9.8e-25 116.3 73 86.3
Migut.F00052 Erythranthe guttata HOM05D005517 ORTHO05D006760 1.7e-24 115.5 73 80.8
CSS0012820 Camellia sinensis var. sinensis HOM05D005517 ORTHO05D006760 6.3e-24 113.6 73 83.6
Cc03_g13370 Coffea canephora HOM05D005517 ORTHO05D006760 6.3e-24 113.6 73 80.8
Cc10_g16370 Coffea canephora HOM05D005517 ORTHO05D006760 6.3e-24 113.6 73 82.2
CAN.G473.115 Capsicum annuum HOM05D005517 ORTHO05D006760 2.4e-23 111.7 73 80.8
Lsat_1_v5_gn_4_78980 Lactuca sativa HOM05D005517 ORTHO05D006760 4.1e-23 110.9 70 84.3
Rhsim10G0005200 Rhododendron simsii HOM05D005517 ORTHO05D006760 7.0e-23 110.2 73 84.9
ECA232G0857 Erigeron canadensis HOM05D005517 ORTHO05D006760 9.1e-23 109.8 68 86.8
Sopen04g004730 Solanum pennellii HOM05D005517 ORTHO05D006760 9.1e-23 109.8 73 79.5
PGSC0003DMG400032535 Solanum tuberosum HOM05D005517 ORTHO05D006760 9.1e-23 109.8 73 79.5
Oeu063019.1 Olea europaea HOM05D005517 ORTHO05D006760 1.6e-22 109.0 73 78.1
Peaxi162Scf00420g00633 Petunia axillaris HOM05D005517 ORTHO05D006760 1.6e-22 109.0 73 76.7
HanXRQChr02g0035131 Helianthus annuus HOM05D005517 ORTHO05D006760 7.7e-22 106.7 70 81.4
Sopen02g038880 Solanum pennellii HOM05D005517 ORTHO05D006760 1.0e-21 106.3 73 78.1
HanXRQChr16g0497941 Helianthus annuus HOM05D005517 ORTHO05D006760 2.3e-21 105.1 68 82.4
Lsat_1_v5_gn_1_29421 Lactuca sativa HOM05D005517 ORTHO05D006760 2.3e-21 105.1 70 78.6
Solyc04g009570.3 Solanum lycopersicum HOM05D005517 ORTHO05D006760 2.3e-21 105.1 73 76.7
PGSC0003DMG402020250 Solanum tuberosum HOM05D005517 ORTHO05D006760 2.9e-21 104.8 73 76.7
TAR629G2363 Trochodendron aralioides HOM05D005517 ORTHO05D006760 2.9e-21 104.8 77 75.3
Nitab4.5_0007375g0080 Nicotiana tabacum HOM05D005517 ORTHO05D006760 5.0e-21 104.0 73 74.0
TAR371G1004 Trochodendron aralioides HOM05D005517 ORTHO05D006760 2.5e-20 101.7 77 74.0
Aqoxy1G01489 Aquilegia oxysepala HOM05D005517 ORTHO05D006760 1.6e-19 99.0 77 74.0
CiPaw.03G057500 Carya illinoinensis HOM05D005517 ORTHO05D006760 2.3e-18 95.1 77 70.1
GSVIVG01028670001 Vitis vinifera HOM05D005517 ORTHO05D006760 4.0e-18 94.4 77 70.1
Glyma.19G093900 Glycine max HOM05D005517 ORTHO05D006760 5.2e-18 94.0 77 67.5
CANSAT64G1159 Cannabis sativa HOM05D005517 ORTHO05D006760 6.8e-18 93.6 77 70.1
Duzib147G1371 Durio zibethinus HOM05D005517 ORTHO05D006760 1.5e-17 92.4 68 72.1
Hund05668 Selenicereus undatus HOM05D005517 ORTHO05D006760 2.0e-17 92.0 77 70.1
Atru.chr6.2589 Acer truncatum HOM05D005517 ORTHO05D006760 2.6e-17 91.7 77 71.4
Nn3g16415 Nelumbo nucifera HOM05D005517 ORTHO05D006760 2.6e-17 91.7 77 68.8
Potri.001G328100 Populus trichocarpa HOM05D005517 ORTHO05D006760 3.4e-17 91.3 77 66.2
Duzib264G0094 Durio zibethinus HOM05D005517 ORTHO05D006760 4.4e-17 90.9 68 73.5
Gohir.A07G229900 Gossypium hirsutum HOM05D005517 ORTHO05D006760 4.4e-17 90.9 70 71.4
Gohir.D07G237100 Gossypium hirsutum HOM05D005517 ORTHO05D006760 4.4e-17 90.9 70 71.4
Gorai.001G273000 Gossypium raimondii HOM05D005517 ORTHO05D006760 4.4e-17 90.9 70 71.4
MBI06_g06692_MAGBIO Magnolia biondii HOM05D005517 ORTHO05D006760 4.4e-17 90.9 77 71.4
Manes.15G162502 Manihot esculenta HOM05D005517 ORTHO05D006760 4.4e-17 90.9 77 67.5
Thecc.04G039500 Theobroma cacao HOM05D005517 ORTHO05D006760 4.4e-17 90.9 68 73.5
QL10p050767 Quercus lobata HOM05D005517 ORTHO05D006760 5.7e-17 90.5 69 73.9
TWI74G0054 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 7.5e-17 90.1 77 66.2
TWI74G0227 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 7.5e-17 90.1 77 66.2
ClCG05G013610 Citrullus lanatus HOM05D005517 ORTHO05D006760 9.8e-17 89.7 77 68.8
Ciclev10017370m.g Citrus clementina HOM05D005517 ORTHO05D006760 9.8e-17 89.7 77 67.5
CARHR199240 Cardamine hirsuta HOM05D005517 ORTHO05D006760 1.7e-16 89.0 72 65.3
COL.COLO4_13282 Corchorus olitorius HOM05D005517 ORTHO05D006760 1.7e-16 89.0 68 72.1
RcHm_v2.0_Chr1g0371371 Rosa chinensis HOM05D005517 ORTHO05D006760 1.7e-16 89.0 73 67.1
RcHm_v2.0_Chr7g0186891 Rosa chinensis HOM05D005517 ORTHO05D006760 1.7e-16 89.0 73 67.1
Cpa.g.sc70.124 Carica papaya HOM05D005517 ORTHO05D006760 2.8e-16 88.2 70 68.6
Phvul.001G091300 Phaseolus vulgaris HOM05D005517 ORTHO05D006760 2.8e-16 88.2 77 62.3
Ca_26962_v3 Cicer arietinum L. HOM05D005517 ORTHO05D006760 4.9e-16 87.4 75 64.0
Cc02_g28320 Coffea canephora HOM05D005517 ORTHO05D006760 4.9e-16 87.4 57 73.7
FvH4_5g10930 Fragaria vesca HOM05D005517 ORTHO05D006760 8.3e-16 86.7 74 67.6
FAN08G0577 Fragaria x ananassa HOM05D005517 ORTHO05D006760 8.3e-16 86.7 74 67.6
FAN13G3313 Fragaria x ananassa HOM05D005517 ORTHO05D006760 8.3e-16 86.7 74 67.6
FAN18G2496 Fragaria x ananassa HOM05D005517 ORTHO05D006760 8.3e-16 86.7 74 67.6
Prupe.5G129500 Prunus persica HOM05D005517 ORTHO05D006760 8.3e-16 86.7 73 67.1
SEGI_12962 Sequoiadendron giganteum HOM05D005517 ORTHO05D006760 8.3e-16 86.7 77 59.7
CDE08G1355 Ceratophyllum demersum HOM05D005517 ORTHO05D006760 1.1e-15 86.3 77 63.6
Eucgr.H04420 Eucalyptus grandis HOM05D005517 ORTHO05D006760 1.1e-15 86.3 77 66.2
Glyma.16G054600 Glycine max HOM05D005517 ORTHO05D006760 1.1e-15 86.3 75 61.3
Aa31LG11G14910 Aethionema arabicum HOM05D005517 ORTHO05D006760 1.8e-15 85.5 72 63.9
Gohir.D04G075800 Gossypium hirsutum HOM05D005517 ORTHO05D006760 1.8e-15 85.5 68 67.6
Sabra17G0058600 Salix brachista HOM05D005517 ORTHO05D006760 1.8e-15 85.5 74 64.9
Duzib187G1036 Durio zibethinus HOM05D005517 ORTHO05D006760 2.4e-15 85.1 68 67.6
Lalb_Chr16g0380111 Lupinus albus HOM05D005517 ORTHO05D006760 2.4e-15 85.1 75 62.7
QL02p071008 Quercus lobata HOM05D005517 ORTHO05D006760 3.2e-15 84.7 64 71.9
A02p02340 Brassica napus HOM05D005517 ORTHO05D006760 4.1e-15 84.3 72 61.1
BraA02t05205Z Brassica rapa HOM05D005517 ORTHO05D006760 4.1e-15 84.3 72 61.1
MELO3C014894.2 Cucumis melo HOM05D005517 ORTHO05D006760 4.1e-15 84.3 73 65.8
Medtr7g028755 Medicago truncatula HOM05D005517 ORTHO05D006760 5.4e-15 84.0 76 59.2
Os05g0517800 Oryza sativa ssp. japonica HOM05D005517 ORTHO05D006760 5.4e-15 84.0 78 62.8
Potri.017G066388 Populus trichocarpa HOM05D005517 ORTHO05D006760 5.4e-15 84.0 74 63.5
Lj1g0000511 Lotus japonicus HOM05D005517 ORTHO05D006760 9.2e-15 83.2 77 62.3
THA.LOC104803813 Tarenaya hassleriana HOM05D005517 ORTHO05D006760 9.2e-15 83.2 72 62.5
HPP92_000894 Vanilla planifolia HOM05D005517 ORTHO05D006760 9.2e-15 83.2 77 62.3
AUR62000640 Chenopodium quinoa HOM05D005517 ORTHO05D006760 2.7e-14 81.6 71 64.8
BcaC03g13514 Brassica carinata HOM05D005517 ORTHO05D006760 3.5e-14 81.3 72 59.7
BcaC03g13515 Brassica carinata HOM05D005517 ORTHO05D006760 3.5e-14 81.3 72 59.7
CsaV3_3G026940 Cucumis sativus L. HOM05D005517 ORTHO05D006760 3.5e-14 81.3 73 63.0
Medtr3g007670 Medicago truncatula HOM05D005517 ORTHO05D006760 3.5e-14 81.3 74 59.5
Carub.0006s1230 Capsella rubella HOM05D005517 ORTHO05D006760 4.6e-14 80.9 73 61.6
AUR62006995 Chenopodium quinoa HOM05D005517 ORTHO05D006760 4.6e-14 80.9 75 61.3
BcaC04g19059 Brassica carinata HOM05D005517 ORTHO05D006760 5.9e-14 80.5 77 58.4
A10p24320 Brassica napus HOM05D005517 ORTHO05D006760 5.9e-14 80.5 77 58.4
C09p63000 Brassica napus HOM05D005517 ORTHO05D006760 5.9e-14 80.5 77 58.4
BolC9t59138H Brassica oleracea HOM05D005517 ORTHO05D006760 5.9e-14 80.5 77 58.4
BraA10t44498Z Brassica rapa HOM05D005517 ORTHO05D006760 5.9e-14 80.5 77 58.4
TPR.G30072 Trifolium pratense HOM05D005517 ORTHO05D006760 5.9e-14 80.5 73 58.9
AT5G14105 Arabidopsis thaliana HOM05D005517 ORTHO05D006760 7.8e-14 80.1 73 63.0
arahy.Tifrunner.gnm1.ann1.3828X0 Arachis hypogaea HOM05D005517 ORTHO05D006760 7.8e-14 80.1 77 61.0
EL10Ac7g18130 Beta vulgaris HOM05D005517 ORTHO05D006760 7.8e-14 80.1 73 64.4
Psat6g022360 Pisum sativum HOM05D005517 ORTHO05D006760 7.8e-14 80.1 77 59.7
Zm00001eb293020 Zea mays HOM05D005517 ORTHO05D006760 7.8e-14 80.1 78 60.3
BcaB08g36959 Brassica carinata HOM05D005517 ORTHO05D006760 1.0e-13 79.7 77 58.4
Psat5g229880 Pisum sativum HOM05D005517 ORTHO05D006760 1.0e-13 79.7 73 57.5
BcaB01g06344 Brassica carinata HOM05D005517 ORTHO05D006760 1.3e-13 79.3 72 56.9
CiPaw.04G038900 Carya illinoinensis HOM05D005517 ORTHO05D006760 1.3e-13 79.3 68 64.7
C02p06560 Brassica napus HOM05D005517 ORTHO05D006760 1.7e-13 79.0 70 60.0
Lalb_Chr05g0214841 Lupinus albus HOM05D005517 ORTHO05D006760 2.3e-13 78.6 75 58.7
MD06G1118400 Malus domestica HOM05D005517 ORTHO05D006760 2.9e-13 78.2 73 61.6
PSO210G3561 Papaver somniferum HOM05D005517 ORTHO05D006760 5.0e-13 77.4 76 57.9
PGR142G3118 Punica granatum HOM05D005517 ORTHO05D006760 6.6e-13 77.0 75 64.0
BcaC03g13513 Brassica carinata HOM05D005517 ORTHO05D006760 8.6e-13 76.6 72 55.6
BcaNung06018 Brassica carinata HOM05D005517 ORTHO05D006760 8.6e-13 76.6 72 56.9
MD14G1126500 Malus domestica HOM05D005517 ORTHO05D006760 8.6e-13 76.6 74 60.8
Hund07167 Selenicereus undatus HOM05D005517 ORTHO05D006760 8.6e-13 76.6 75 57.3
Aa31LG5G11080 Aethionema arabicum HOM05D005517 ORTHO05D006760 1.1e-12 76.3 68 61.8
EL10Ac4g09777 Beta vulgaris HOM05D005517 ORTHO05D006760 1.1e-12 76.3 74 59.5
Haze_14891 Corylus avellana HOM05D005517 ORTHO05D006760 1.9e-12 75.5 51 76.5
PSO302G0245 Papaver somniferum HOM05D005517 ORTHO05D006760 1.9e-12 75.5 76 55.3
Ca_14034_v3 Cicer arietinum L. HOM05D005517 ORTHO05D006760 3.3e-12 74.7 68 55.9
Sabra16G0209900 Salix brachista HOM05D005517 ORTHO05D006760 5.6e-12 73.9 56 67.9
TWI34G0084 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 5.6e-12 73.9 76 59.2
TWI34G1158 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 5.6e-12 73.9 76 59.2
vmacro05969 Vaccinium macrocarpon HOM05D005517 ORTHO05D006760 5.6e-12 73.9 54 75.9
Thhalv10021865m.g Eutrema salsugineum HOM05D005517 ORTHO05D006760 1.2e-11 72.8 68 55.9
Peaxi162Scf00064g01122 Petunia axillaris HOM05D005517 ORTHO05D006760 1.2e-11 72.8 51 70.6
TWI60G0382 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 1.6e-11 72.4 76 60.5
Phvul.009G125500 Phaseolus vulgaris HOM05D005517 ORTHO05D006760 2.8e-11 71.6 53 67.9
THA.LOC104814182 Tarenaya hassleriana HOM05D005517 ORTHO05D006760 1.4e-10 69.3 50 70.0
Prupe.2G009500 Prunus persica HOM05D005517 ORTHO05D006760 5.2e-10 67.4 74 62.2
arahy.Tifrunner.gnm1.ann1.9JMW1H Arachis hypogaea HOM05D005517 ORTHO05D006760 1.2e-09 66.2 50 66.0
AagrBONN_evm.TU.Sc2ySwM_228.2988 Anthoceros agrestis HOM05D005517 ORTHO05D006760 2.6e-09 65.1 76 51.3
Os03g0733000 Oryza sativa ssp. japonica HOM05D005517 ORTHO05D006760 3.4e-09 64.7 77 51.9
Mapoly0055s0070 Marchantia polymorpha HOM05D005517 ORTHO05D006760 7.5e-09 63.5 67 50.7
TPR.G36037 Trifolium pratense HOM05D005517 ORTHO05D006760 2.9e-08 61.6 47 63.8
Pp3c1_33450 Physcomitrium patens HOM05D005517 ORTHO05D006760 4.9e-08 60.8 73 43.8


User provided reference genes

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