Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038469 Camellia sinensis var. sinensis HOM05D008321 ORTHO05D003768 2.5e-147 525.4 263 100.0
CSS0049472 Camellia sinensis var. sinensis HOM05D008321 ORTHO05D003768 5.0e-103 378.3 292 72.9
CSS0021689 Camellia sinensis var. sinensis HOM05D008321 ORTHO05D003768 3.1e-89 332.4 263 70.3
CSS0010964 Camellia sinensis var. sinensis HOM05D008321 ORTHO05D003768 1.4e-81 307.0 270 66.3
CSS0033678 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 1.2e-32 144.4 135 60.7
CSS0040185 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 2.8e-29 133.3 152 54.6
RcHm_v2.0_Chr6g0269851 Rosa chinensis HOM05D008321 ORTHO05D003768 3.1e-28 129.8 291 31.6
CSS0045228 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 5.8e-27 125.6 149 54.4
FvH4_1g29233 Fragaria vesca HOM05D008321 ORTHO05D003768 9.3e-25 118.2 272 32.7
RcHm_v2.0_Chr2g0134701 Rosa chinensis HOM05D009091 ORTHO05D003768 4.0e-20 102.8 194 34.0
FvH4_4g16173 Fragaria vesca HOM05D008321 ORTHO05D003768 6.9e-20 102.1 277 28.5
FvH4_6g17382 Fragaria vesca HOM05D008321 ORTHO05D003768 2.6e-19 100.1 298 27.9
FvH4_4g10363 Fragaria vesca HOM05D008321 ORTHO05D003768 9.9e-19 98.2 184 34.8
Atru.chr7.467 Acer truncatum HOM05D000107 ORTHO05D000062 2.9e-18 96.7 220 30.9
FvH4_3g32731 Fragaria vesca HOM05D008321 ORTHO05D003768 1.1e-17 94.7 281 26.7
FAN08G3223 Fragaria x ananassa HOM05D009091 ORTHO05D003768 2.4e-17 93.6 193 32.1
RcHm_v2.0_Chr4g0433611 Rosa chinensis HOM05D009091 ORTHO05D003768 5.4e-17 92.4 221 33.0
Aqoxy1G02807 Aquilegia oxysepala HOM05D008321 ORTHO05D003768 7.9e-16 88.6 273 27.5
CSS0011924 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006706 1.0e-15 88.2 49 87.8
FvH4_4g15323 Fragaria vesca HOM05D008321 ORTHO05D010380 1.8e-15 87.4 238 29.4
FvH4_5g37213 Fragaria vesca HOM05D008321 ORTHO05D010380 2.3e-15 87.0 207 30.0
FAN16G3103 Fragaria x ananassa HOM05D008321 ORTHO05D003768 3.0e-15 86.7 208 30.8
MELO3C031887.2 Cucumis melo HOM05D007314 ORTHO05D003768 5.1e-15 85.9 260 30.4
CsaV3_3G006830 Cucumis sativus L. HOM05D007314 ORTHO05D003768 1.1e-14 84.7 308 30.2
FAN19G2766 Fragaria x ananassa HOM05D008321 ORTHO05D003768 1.5e-14 84.3 254 30.7
Rhsim03G0123400 Rhododendron simsii HOM05D007314 ORTHO05D010380 2.5e-14 83.6 203 31.0
FvH4_6g35541 Fragaria vesca HOM05D009091 ORTHO05D003768 4.3e-14 82.8 138 37.0
Oeu029662.1 Olea europaea HOM05D009091 ORTHO05D003768 7.4e-14 82.0 149 37.6
CSS0045721 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 9.6e-14 81.6 49 81.6
FAN01G0361 Fragaria x ananassa HOM05D009091 ORTHO05D004377 9.6e-14 81.6 133 41.4
Sed0001060 Sechium edule HOM05D007314 ORTHO05D003768 2.1e-13 80.5 233 30.9
MELO3C035542.2 Cucumis melo HOM05D007314 ORTHO05D003768 6.2e-13 79.0 250 29.2
FAN11G2121 Fragaria x ananassa HOM05D008321 ORTHO05D003768 1.4e-12 77.8 102 43.1
RcHm_v2.0_Chr4g0420561 Rosa chinensis HOM05D009091 ORTHO05D003768 1.4e-12 77.8 151 35.1
FAN22G1616 Fragaria x ananassa HOM05D009091 ORTHO05D003768 1.8e-12 77.4 128 42.2
Rhsim04G0083300 Rhododendron simsii HOM05D007314 ORTHO05D010380 2.4e-12 77.0 192 30.7
RcHm_v2.0_Chr3g0496631 Rosa chinensis HOM05D009091 ORTHO05D003768 9.0e-12 75.1 103 39.8
Oeu021350.1 Olea europaea HOM05D023826 ORTHO05D003768 2.0e-11 73.9 97 42.3
Oeu041304.1 Olea europaea HOM05D009091 ORTHO05D003768 2.6e-11 73.6 143 34.3
RcHm_v2.0_Chr5g0033771 Rosa chinensis HOM05D020182 ORTHO05D003768 2.6e-11 73.6 104 40.4
TWI15G0427 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 4.5e-11 72.8 180 31.1
Rhsim01G0136300 Rhododendron simsii HOM05D004909 ORTHO05D009316 5.8e-11 72.4 202 27.7
CANSAT25G2929 Cannabis sativa HOM05D007314 ORTHO05D003768 7.6e-11 72.0 262 27.5
FAN21G0782 Fragaria x ananassa HOM05D008321 ORTHO05D003768 7.6e-11 72.0 87 44.8
Oeu040990.1 Olea europaea HOM05D000700 ORTHO05D000397 7.6e-11 72.0 115 38.3
Sed0011740 Sechium edule HOM05D007314 ORTHO05D003768 7.6e-11 72.0 235 30.2
PSO339G6242 Papaver somniferum HOM05D008526 ORTHO05D010380 1.3e-10 71.2 298 24.2
RcHm_v2.0_Chr3g0458231 Rosa chinensis HOM05D007314 ORTHO05D003768 1.3e-10 71.2 290 29.0
Oeu050751.1 Olea europaea HOM05D009091 ORTHO05D003768 1.7e-10 70.9 146 35.6
PSO339G2614 Papaver somniferum HOM05D008526 ORTHO05D010380 1.7e-10 70.9 273 23.4
RcHm_v2.0_Chr3g0460621 Rosa chinensis HOM05D007314 ORTHO05D003768 2.2e-10 70.5 277 28.2
FvH4_2g07142 Fragaria vesca HOM05D008321 ORTHO05D003768 2.9e-10 70.1 224 26.8
Oeu016711.1 Olea europaea HOM05D023826 ORTHO05D003768 1.1e-09 68.2 92 40.2
CSS0009587 Camellia sinensis var. sinensis HOM05D009091 ORTHO05D003768 1.4e-09 67.8 85 52.9
CSS0011469 Camellia sinensis var. sinensis HOM05D009091 ORTHO05D003768 1.4e-09 67.8 85 52.9
FvH4_6g20173 Fragaria vesca HOM05D008321 ORTHO05D010380 1.4e-09 67.8 104 37.5
RcHm_v2.0_Chr7g0231331 Rosa chinensis HOM05D009091 ORTHO05D003768 1.9e-09 67.4 88 43.2
TPR.G34719 Trifolium pratense HOM05D002954 ORTHO05D000385 1.9e-09 67.4 180 31.1
CSS0035442 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D005970 2.4e-09 67.0 206 26.2
MELO3C008679.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.4e-09 67.0 274 27.0
FAN08G2819 Fragaria x ananassa HOM05D008321 ORTHO05D003768 2.4e-09 67.0 139 31.7
ClCG07G007690 Citrullus lanatus HOM05D000107 ORTHO05D000062 4.2e-09 66.2 108 41.7
FAN18G1459 Fragaria x ananassa HOM05D008321 ORTHO05D003768 4.2e-09 66.2 196 25.5
Oeu036654.1 Olea europaea HOM05D023826 ORTHO05D003768 4.2e-09 66.2 83 45.8
Rhsim06G0121300 Rhododendron simsii HOM05D007314 ORTHO05D010380 5.5e-09 65.9 111 40.5
RcHm_v2.0_Chr3g0485221 Rosa chinensis HOM05D000539 ORTHO05D000233 5.5e-09 65.9 219 28.8
CiPaw.16G105200 Carya illinoinensis HOM05D001309 ORTHO05D000385 7.1e-09 65.5 213 27.7
CiPaw.10G087600 Carya illinoinensis HOM05D001309 ORTHO05D000385 9.3e-09 65.1 213 27.7
FAN18G4094 Fragaria x ananassa HOM05D008321 ORTHO05D003768 9.3e-09 65.1 227 25.6
RcHm_v2.0_Chr3g0483461 Rosa chinensis HOM05D000539 ORTHO05D000233 9.3e-09 65.1 219 28.8
CANSAT25G0318 Cannabis sativa HOM05D007314 ORTHO05D010380 1.2e-08 64.7 109 41.3
ClCG05G014410 Citrullus lanatus HOM05D007314 ORTHO05D003768 1.6e-08 64.3 279 25.4
FvH4_5g18423 Fragaria vesca HOM05D009091 ORTHO05D000062 2.1e-08 63.9 190 26.8
FvH4_5g18843 Fragaria vesca HOM05D008321 ORTHO05D003768 2.1e-08 63.9 160 32.5
FAN28G0089 Fragaria x ananassa HOM05D008321 ORTHO05D003768 2.1e-08 63.9 104 37.5
Oeu048290.1 Olea europaea HOM05D009091 ORTHO05D003768 2.1e-08 63.9 139 33.1
AUR62038589 Chenopodium quinoa HOM05D000107 ORTHO05D000233 2.7e-08 63.5 212 28.3
FAN03G1875 Fragaria x ananassa HOM05D008321 ORTHO05D003768 3.5e-08 63.2 192 28.6
PSO339G2856 Papaver somniferum HOM05D008526 ORTHO05D010380 4.6e-08 62.8 197 25.4
Oeu060777.1 Olea europaea HOM05D009091 ORTHO05D003768 7.9e-08 62.0 115 38.3
FAN16G0148 Fragaria x ananassa HOM05D008321 ORTHO05D003768 1.0e-07 61.6 85 36.5
CiPaw.16G058400 Carya illinoinensis HOM05D001309 ORTHO05D000385 1.3e-07 61.2 222 26.6
FAN23G0987 Fragaria x ananassa HOM05D008321 ORTHO05D003768 1.3e-07 61.2 135 35.6
MBI13_g31587_MAGBIO Magnolia biondii HOM05D009042 ORTHO05D003170 1.3e-07 61.2 155 27.7
CiPaw.09G181600 Carya illinoinensis HOM05D001309 ORTHO05D000385 1.8e-07 60.8 213 26.8
Sed0009392 Sechium edule HOM05D007314 ORTHO05D003768 1.8e-07 60.8 215 30.2
Lsat_1_v5_gn_9_120341 Lactuca sativa HOM05D000539 ORTHO05D000233 3.0e-07 60.1 174 29.9
Oeu047507.2 Olea europaea HOM05D007314 ORTHO05D003768 3.0e-07 60.1 121 36.4
Sed0001469 Sechium edule HOM05D007314 ORTHO05D003768 3.0e-07 60.1 107 39.3
Sed0011465 Sechium edule HOM05D007314 ORTHO05D003768 3.0e-07 60.1 107 39.3
CSS0006329 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.9e-07 59.7 199 24.1
Rhsim01G0098700 Rhododendron simsii HOM05D007314 ORTHO05D010380 3.9e-07 59.7 127 32.3
FvH4_2g08144 Fragaria vesca HOM05D008321 ORTHO05D003768 8.7e-07 58.5 118 33.1
Sed0004787 Sechium edule HOM05D000539 ORTHO05D000233 8.7e-07 58.5 133 32.3
HanXRQChr10g0317551 Helianthus annuus HOM05D000616 ORTHO05D000233 1.1e-06 58.2 200 27.5
Phvul.003G087300 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 1.1e-06 58.2 203 26.6
FAN24G2086 Fragaria x ananassa HOM05D008321 ORTHO05D003768 1.5e-06 57.8 122 32.0
RcHm_v2.0_Chr1g0315701 Rosa chinensis HOM05D009091 ORTHO05D003768 1.5e-06 57.8 125 32.0
HanXRQChr14g0441971 Helianthus annuus HOM05D000107 ORTHO05D000062 1.9e-06 57.4 200 27.0
MBI06_g45493_MAGBIO Magnolia biondii HOM05D009042 ORTHO05D003170 1.9e-06 57.4 260 23.1
MBI12_g03766_MAGBIO Magnolia biondii HOM05D009042 ORTHO05D003170 1.9e-06 57.4 182 24.7
PSO832G4314 Papaver somniferum HOM05D008526 ORTHO05D010380 1.9e-06 57.4 105 32.4
VMungo0200G0001 Vigna mungo HOM05D002644 ORTHO05D003267 1.9e-06 57.4 223 27.8
MBI14_g08057_MAGBIO Magnolia biondii HOM05D009042 ORTHO05D003170 2.5e-06 57.0 182 24.7
BolC4t24885H Brassica oleracea HOM05D031530 ORTHO05D023934 3.3e-06 56.6 96 38.5
Prupe.1G130900 Prunus persica HOM05D000539 ORTHO05D000233 3.3e-06 56.6 166 27.7
RcHm_v2.0_Chr4g0401831 Rosa chinensis HOM05D000539 ORTHO05D000233 3.3e-06 56.6 194 29.9
Duzib084G0418 Durio zibethinus HOM05D000539 ORTHO05D000233 4.3e-06 56.2 179 28.5
RcHm_v2.0_Chr1g0325021 Rosa chinensis HOM05D000539 ORTHO05D000233 4.3e-06 56.2 102 36.3


User provided reference genes

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