Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038434 Camellia sinensis var. sinensis HOM05D006651 ORTHO05D008231 1.8e-166 589.3 339 100.0
CSS0049056 Camellia sinensis var. sinensis HOM05D006651 ORTHO05D008231 1.8e-166 589.3 339 100.0
Dinv19605 Davidia involucrata HOM05D006651 ORTHO05D008231 4.8e-82 308.9 342 61.4
Actinidia12777 Actinidia chinensis HOM05D006651 ORTHO05D008231 7.9e-77 291.6 356 55.1
Rhsim06G0240200 Rhododendron simsii HOM05D006651 ORTHO05D008231 1.6e-74 283.9 338 58.9
Actinidia07365 Actinidia chinensis HOM05D006651 ORTHO05D008231 4.5e-72 275.8 353 56.1
PGSC0003DMG400022122 Solanum tuberosum HOM05D006651 ORTHO05D008231 6.5e-71 271.9 337 52.5
Hma1.2p1_0933F.1_g238380 Hydrangea macrophylla HOM05D006651 ORTHO05D008231 8.4e-71 271.6 347 57.3
TWI38G1376 Tripterygium wilfordii HOM05D006651 ORTHO05D008231 7.9e-69 265.0 354 49.2
Oeu031998.1 Olea europaea HOM05D006651 ORTHO05D008231 1.1e-67 261.2 339 51.6
TAR626G0823 Trochodendron aralioides HOM05D006651 ORTHO05D008231 4.3e-67 259.2 361 56.2
MD05G1222700 Malus domestica HOM05D006651 ORTHO05D008231 7.4e-67 258.5 368 47.0
Sopen07g034690 Solanum pennellii HOM05D006651 ORTHO05D008231 1.3e-66 257.7 337 50.7
CiPaw.01G120000 Carya illinoinensis HOM05D006651 ORTHO05D008231 2.2e-66 256.9 362 49.2
Prupe.4G137600 Prunus persica HOM05D006651 ORTHO05D008231 2.2e-66 256.9 366 48.6
CiPaw.02G065800 Carya illinoinensis HOM05D006651 ORTHO05D008231 3.7e-66 256.1 363 51.5
MD10G1204300 Malus domestica HOM05D006651 ORTHO05D008231 1.8e-65 253.8 370 47.6
AUR62044139 Chenopodium quinoa HOM05D006651 ORTHO05D008231 3.1e-65 253.1 338 47.0
SalBow8G4165 Salvia bowleyana HOM05D006651 ORTHO05D008231 4.1e-65 252.7 351 49.9
Phvul.005G050600 Phaseolus vulgaris HOM05D006651 ORTHO05D008231 5.3e-65 252.3 359 48.5
Ciclev10005569m.g Citrus clementina HOM05D006651 ORTHO05D008231 9.0e-65 251.5 363 49.9
CsaV3_6G013610 Cucumis sativus L. HOM05D006651 ORTHO05D008231 1.5e-64 250.8 365 48.2
MBI14_g16769_MAGBIO Magnolia biondii HOM05D006651 ORTHO05D008231 2.0e-64 250.4 356 51.1
Manes.06G174200 Manihot esculenta HOM05D006651 ORTHO05D008231 2.0e-64 250.4 378 46.3
SGA_v2.0_scaffold186G40208 Striga asiatica HOM05D006651 ORTHO05D008231 2.0e-64 250.4 349 51.6
ClCG02G018590 Citrullus lanatus HOM05D006651 ORTHO05D008231 2.6e-64 250.0 366 48.1
Psat1g003600 Pisum sativum HOM05D006651 ORTHO05D008231 3.4e-64 249.6 352 48.0
Sp1g41740 Schrenkiella parvula HOM05D006651 ORTHO05D008231 7.7e-64 248.4 344 52.0
Lj3g0020848 Lotus japonicus HOM05D006651 ORTHO05D008231 2.9e-63 246.5 357 48.2
Glyma.08G168700 Glycine max HOM05D006651 ORTHO05D008231 3.8e-63 246.1 360 47.5
MELO3C019651.2 Cucumis melo HOM05D006651 ORTHO05D008231 6.5e-63 245.4 366 47.3
Atru.chr1.194 Acer truncatum HOM05D006651 ORTHO05D008231 8.5e-63 245.0 384 50.3
MSTRG.14550 Avicennia marina HOM05D006651 ORTHO05D008231 3.2e-62 243.0 349 48.1
DCAR_019927 Daucus carota HOM05D006651 ORTHO05D008231 3.2e-62 243.0 360 48.1
FAN16G3403 Fragaria x ananassa HOM05D006651 ORTHO05D008231 4.2e-62 242.7 380 47.6
QL04p077146 Quercus lobata HOM05D006651 ORTHO05D008231 9.4e-62 241.5 440 43.2
Cpa.g.sc468.1 Carica papaya HOM05D006651 ORTHO05D008231 3.6e-61 239.6 366 45.6
Lsat_1_v5_gn_7_111741 Lactuca sativa HOM05D006651 ORTHO05D008231 3.6e-61 239.6 331 55.9
PGR004G2050 Punica granatum HOM05D006651 ORTHO05D008231 3.6e-61 239.6 365 44.9
RcHm_v2.0_Chr5g0026131 Rosa chinensis HOM05D006651 ORTHO05D008231 6.1e-61 238.8 362 47.0
Glyma.15G258500 Glycine max HOM05D006651 ORTHO05D008231 7.9e-61 238.4 359 47.6
Peaxi162Scf00452g00625 Petunia axillaris HOM05D006651 ORTHO05D008231 7.9e-61 238.4 335 49.0
FAN25G3348 Fragaria x ananassa HOM05D006651 ORTHO05D008231 1.4e-60 237.7 368 48.1
Migut.H01683 Erythranthe guttata HOM05D006651 ORTHO05D008231 1.8e-60 237.3 355 53.2
arahy.Tifrunner.gnm1.ann1.41FYNA Arachis hypogaea HOM05D006651 ORTHO05D008231 2.3e-60 236.9 360 47.8
FvH4_3g15510 Fragaria vesca HOM05D006651 ORTHO05D008231 3.0e-60 236.5 368 47.3
Nitab4.5_0002321g0030 Nicotiana tabacum HOM05D006651 ORTHO05D008231 3.9e-60 236.1 338 51.2
Nn7g37920 Nelumbo nucifera HOM05D006651 ORTHO05D008231 5.1e-60 235.7 342 53.8
Ah.16g106470 Amaranthus hybridus HOM05D006651 ORTHO05D008231 8.8e-60 235.0 337 46.6
CAN.G943.45 Capsicum annuum HOM05D006651 ORTHO05D008231 1.1e-59 234.6 338 48.5
Cfa019412 Carpinus fangiana HOM05D006651 ORTHO05D008231 1.1e-59 234.6 369 52.8
Eucgr.F04427 Eucalyptus grandis HOM05D006651 ORTHO05D008231 1.1e-59 234.6 370 45.7
CANSAT80G1595 Cannabis sativa HOM05D006651 ORTHO05D008231 1.5e-59 234.2 372 45.4
Lalb_Chr25g0284841 Lupinus albus HOM05D006651 ORTHO05D008231 1.5e-59 234.2 348 53.2
FAN11G0473 Fragaria x ananassa HOM05D006651 ORTHO05D008231 2.0e-59 233.8 368 47.0
Nitab4.5_0002633g0010 Nicotiana tabacum HOM05D006651 ORTHO05D008231 2.0e-59 233.8 339 51.0
Aqoxy1G01470 Aquilegia oxysepala HOM05D006651 ORTHO05D008231 3.3e-59 233.0 382 51.3
FAN21G3142 Fragaria x ananassa HOM05D006651 ORTHO05D008231 5.7e-59 232.3 351 47.9
EL10Ac2g03282 Beta vulgaris HOM05D006651 ORTHO05D008231 7.4e-59 231.9 336 47.3
Lj1A907T22 Lonicera japonica HOM05D006651 ORTHO05D008231 1.7e-58 230.7 349 48.1
Haze_07841 Corylus avellana HOM05D006651 ORTHO05D008231 2.2e-58 230.3 364 53.3
Sed0000278 Sechium edule HOM05D006651 ORTHO05D008231 2.2e-58 230.3 369 44.4
Sabra05G0079600 Salix brachista HOM05D006651 ORTHO05D008231 8.2e-58 228.4 359 47.9
Sed0018431 Sechium edule HOM05D006651 ORTHO05D008231 1.4e-57 227.6 367 46.3
arahy.Tifrunner.gnm1.ann1.JFLR83 Arachis hypogaea HOM05D006651 ORTHO05D008231 1.8e-57 227.3 353 46.2
AUR62042421 Chenopodium quinoa HOM05D006651 ORTHO05D008231 2.4e-57 226.9 301 45.8
Carub.0001s4469 Capsella rubella HOM05D006651 ORTHO05D008231 3.1e-57 226.5 353 46.5
AT1G56090 Arabidopsis thaliana HOM05D006651 ORTHO05D008231 9.1e-57 224.9 354 52.3
C03p93400 Brassica napus HOM05D006651 ORTHO05D008231 2.6e-56 223.4 354 44.9
Sc09g0007630 Simmondsia chinensis HOM05D006651 ORTHO05D008231 2.6e-56 223.4 337 46.6
BolC3t21637H Brassica oleracea HOM05D006651 ORTHO05D008231 3.4e-56 223.0 354 44.9
HanXRQChr11g0335031 Helianthus annuus HOM05D006651 ORTHO05D008231 3.4e-56 223.0 331 52.6
TPR.G33804 Trifolium pratense HOM05D006651 ORTHO05D008231 3.4e-56 223.0 325 46.2
Gorai.009G353300 Gossypium raimondii HOM05D006651 ORTHO05D008231 7.7e-56 221.9 382 46.1
BcaB04g16920 Brassica carinata HOM05D001386 ORTHO05D004014 1.3e-55 221.1 358 43.9
Ca_03654_v3 Cicer arietinum L. HOM05D006651 ORTHO05D008231 1.3e-55 221.1 342 46.2
VMungo1080G1904 Vigna mungo HOM05D006651 ORTHO05D008231 1.7e-55 220.7 362 44.2
THA.LOC104815722 Tarenaya hassleriana HOM05D006651 ORTHO05D008231 2.2e-55 220.3 366 43.2
Potri.005G097300 Populus trichocarpa HOM05D006651 ORTHO05D008231 2.9e-55 219.9 380 44.7
Cc05_g16240 Coffea canephora HOM05D006651 ORTHO05D008231 3.8e-55 219.5 325 47.7
Hund20096 Selenicereus undatus HOM05D006651 ORTHO05D008231 3.8e-55 219.5 379 43.0
CARHR045820 Cardamine hirsuta HOM05D006651 ORTHO05D008231 6.5e-55 218.8 347 47.6
CDE04G2116 Ceratophyllum demersum HOM05D006651 ORTHO05D008231 8.5e-55 218.4 346 43.9
Thhalv10011720m.g Eutrema salsugineum HOM05D006651 ORTHO05D008231 1.9e-54 217.2 348 48.9
Aa31LG10G160 Aethionema arabicum HOM05D006651 ORTHO05D008231 2.5e-54 216.9 372 44.1
Manes.14G011700 Manihot esculenta HOM05D006651 ORTHO05D008231 2.7e-53 213.4 378 41.8
A08p00100 Brassica napus HOM05D006651 ORTHO05D008231 1.4e-52 211.1 351 44.4
BraA08t32067Z Brassica rapa HOM05D006651 ORTHO05D008231 1.4e-52 211.1 351 44.4
AL1G64350 Arabidopsis lyrata HOM05D006651 ORTHO05D008231 3.0e-52 209.9 344 44.8
HPP92_020506 Vanilla planifolia HOM05D006651 ORTHO05D008231 3.9e-52 209.5 351 41.9
ATR0763G149 Amborella trichopoda HOM05D006651 ORTHO05D008231 6.7e-52 208.8 329 48.0
Gorai.002G104800 Gossypium raimondii HOM05D006651 ORTHO05D008231 1.1e-51 208.0 392 40.3
Thecc.07G160400 Theobroma cacao HOM05D006651 ORTHO05D008231 2.6e-51 206.8 437 39.4
Gohir.D01G080100 Gossypium hirsutum HOM05D006651 ORTHO05D008231 3.3e-51 206.5 392 40.3
vmacro11716 Vaccinium macrocarpon HOM05D006651 ORTHO05D008231 3.3e-51 206.5 416 47.1
SEGI_26280 Sequoiadendron giganteum HOM05D006651 ORTHO05D008231 4.4e-51 206.1 339 42.8
ECA236G4704 Erigeron canadensis HOM05D006651 ORTHO05D008231 3.7e-50 203.0 335 51.3
Gohir.A01G095800 Gossypium hirsutum HOM05D006651 ORTHO05D008231 1.2e-48 198.0 392 39.3
MBI14_g38409_MAGBIO Magnolia biondii HOM05D006651 ORTHO05D008231 1.5e-48 197.6 315 51.4
Duzib213G0371 Durio zibethinus HOM05D006651 ORTHO05D008231 2.6e-48 196.8 311 45.0
BcaB04g16921 Brassica carinata HOM05D006651 ORTHO05D008231 1.0e-47 194.9 343 46.1
Gohir.A04G051400 Gossypium hirsutum HOM05D006651 ORTHO05D008231 1.9e-46 190.7 371 41.2
unitig_578.g16054 Utricularia gibba HOM05D006651 ORTHO05D008231 3.6e-45 186.4 337 41.5
COL.COLO4_38369 Corchorus olitorius HOM05D006651 ORTHO05D008231 1.1e-41 174.9 203 51.7
AagrBONN_evm.TU.Sc2ySwM_117.2491 Anthoceros agrestis HOM05D006651 ORTHO05D008231 1.8e-41 174.1 324 36.7
SMO365G0063 Selaginella moellendorffii HOM05D006651 ORTHO05D008231 7.0e-41 172.2 330 35.2
Medtr2g067870 Medicago truncatula HOM05D006651 ORTHO05D008231 5.0e-39 166.0 194 51.0
Solyc07g066530.4 Solanum lycopersicum HOM05D006651 ORTHO05D008231 5.5e-38 162.5 181 59.1
Pp3c12_16150 Physcomitrium patens HOM05D006651 ORTHO05D008231 2.1e-37 160.6 326 35.3
Pp3c3_32820 Physcomitrium patens HOM05D006651 ORTHO05D008231 2.1e-37 160.6 331 35.0
MBI14_g16766_MAGBIO Magnolia biondii HOM05D006651 ORTHO05D008231 2.7e-37 160.2 217 57.6
Os04g0616100 Oryza sativa ssp. japonica HOM05D006651 ORTHO05D008231 1.0e-36 158.3 222 50.0
GSVIVG01020279001 Vitis vinifera HOM05D006651 ORTHO05D008231 1.0e-36 158.3 186 51.1
Mapoly0043s0136 Marchantia polymorpha HOM05D006651 ORTHO05D008231 2.4e-33 147.1 304 39.8
SMO364G0850 Selaginella moellendorffii HOM05D006651 ORTHO05D008231 7.7e-32 142.1 334 32.3
Zm00001eb070740 Zea mays HOM05D006651 ORTHO05D008231 1.1e-30 138.3 200 43.5
Pp3c4_11850 Physcomitrium patens HOM05D006651 ORTHO05D008231 3.2e-30 136.7 325 33.8
TAR383G0051 Trochodendron aralioides HOM05D006651 ORTHO05D008231 1.2e-19 101.7 62 75.8
Gohir.D05G329900 Gossypium hirsutum HOM05D006651 ORTHO05D008231 5.4e-17 92.8 147 43.5
MBI01_g45067_MAGBIO Magnolia biondii HOM05D006651 ORTHO05D008231 2.7e-16 90.5 94 56.4
Medtr2g067860 Medicago truncatula HOM05D006651 ORTHO05D008231 5.0e-15 86.3 81 65.4
MBI19_g29231_MAGBIO Magnolia biondii HOM05D006651 ORTHO05D008231 1.1e-09 68.6 48 64.6


User provided reference genes

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