Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038412 Camellia sinensis var. sinensis HOM05D004208 ORTHO05D005156 4.4e-262 907.5 489 100.0
CSS0041954 Camellia sinensis var. sinensis HOM05D004208 ORTHO05D005156 4.5e-259 897.5 489 98.2
Dinv22405 Davidia involucrata HOM05D004208 ORTHO05D005156 4.7e-216 754.6 492 78.9
Actinidia07297 Actinidia chinensis HOM05D004208 ORTHO05D005156 7.6e-214 747.3 492 79.9
Actinidia25791 Actinidia chinensis HOM05D004208 ORTHO05D005156 1.4e-207 726.5 506 77.1
Hma1.2p1_0273F.1_g109690 Hydrangea macrophylla HOM05D004208 ORTHO05D005156 9.0e-199 697.2 492 77.2
Lj2A1151T32 Lonicera japonica HOM05D004208 ORTHO05D005156 2.9e-197 692.2 495 73.5
TAR636G1466 Trochodendron aralioides HOM05D004208 ORTHO05D005156 1.8e-194 682.9 492 72.6
Thecc.01G258100 Theobroma cacao HOM05D004208 ORTHO05D005156 7.4e-193 677.6 490 71.2
Actinidia09547 Actinidia chinensis HOM05D004208 ORTHO05D005156 2.2e-189 666.0 503 72.4
Duzib138G0474 Durio zibethinus HOM05D004208 ORTHO05D005156 3.8e-189 665.2 490 70.6
Gohir.D08G208600 Gossypium hirsutum HOM05D004208 ORTHO05D005156 9.3e-188 660.6 490 70.2
Gorai.004G221000 Gossypium raimondii HOM05D004208 ORTHO05D005156 1.6e-187 659.8 490 70.2
Gohir.A08G190100 Gossypium hirsutum HOM05D004208 ORTHO05D005156 5.1e-186 654.8 490 70.6
GSVIVG01028335001 Vitis vinifera HOM05D004208 ORTHO05D005156 8.7e-186 654.1 492 72.4
COL.COLO4_05893 Corchorus olitorius HOM05D004208 ORTHO05D005156 1.4e-183 646.7 499 67.7
Manes.12G032400 Manihot esculenta HOM05D004208 ORTHO05D005156 2.0e-182 642.9 490 69.0
Duzib133G1203 Durio zibethinus HOM05D004208 ORTHO05D005156 7.6e-182 641.0 490 67.1
Cfa012194 Carpinus fangiana HOM05D004208 ORTHO05D005156 2.7e-179 632.5 481 67.6
Rhsim01G0263600 Rhododendron simsii HOM05D004208 ORTHO05D005156 4.6e-179 631.7 496 70.6
Prupe.8G223600 Prunus persica HOM05D004208 ORTHO05D005156 6.1e-179 631.3 490 66.9
QL12p032241 Quercus lobata HOM05D004208 ORTHO05D005156 1.8e-175 619.8 460 72.6
Atru.chr5.1689 Acer truncatum HOM05D004208 ORTHO05D005156 9.0e-175 617.5 490 69.4
Ciclev10019992m.g Citrus clementina HOM05D004208 ORTHO05D005156 1.2e-174 617.1 491 69.5
CANSAT01G2107 Cannabis sativa HOM05D004208 ORTHO05D005156 6.5e-173 611.3 496 65.1
PGR031G1029 Punica granatum HOM05D004208 ORTHO05D005156 6.5e-173 611.3 494 65.6
Dinv34629 Davidia involucrata HOM05D004208 ORTHO05D005156 1.9e-172 609.8 430 75.1
CiPaw.11G131900 Carya illinoinensis HOM05D004208 ORTHO05D005156 2.5e-172 609.4 461 67.2
Haze_08822 Corylus avellana HOM05D004208 ORTHO05D005156 3.2e-172 609.0 491 64.8
CDE03G0182 Ceratophyllum demersum HOM05D004208 ORTHO05D005156 1.0e-170 604.0 492 64.4
Sopen01g041810 Solanum pennellii HOM05D004208 ORTHO05D005156 1.0e-170 604.0 502 63.5
Solyc01g098230.3 Solanum lycopersicum HOM05D004208 ORTHO05D005156 1.1e-169 600.5 499 63.3
Migut.O00608 Erythranthe guttata HOM05D004208 ORTHO05D005156 2.5e-169 599.4 498 64.9
RcHm_v2.0_Chr6g0288111 Rosa chinensis HOM05D004208 ORTHO05D005156 2.8e-168 595.9 490 65.9
Migut.N01348 Erythranthe guttata HOM05D004208 ORTHO05D005156 2.4e-167 592.8 498 64.7
Sed0003224 Sechium edule HOM05D004208 ORTHO05D005156 2.4e-167 592.8 490 63.5
Cc01_g18340 Coffea canephora HOM05D004208 ORTHO05D005156 3.1e-167 592.4 497 63.0
Manes.13G034400 Manihot esculenta HOM05D004208 ORTHO05D005156 9.1e-167 590.9 490 63.5
Potri.002G038300 Populus trichocarpa HOM05D004208 ORTHO05D005156 9.1e-167 590.9 492 67.1
Potri.005G224500 Populus trichocarpa HOM05D004208 ORTHO05D005156 1.2e-166 590.5 490 66.5
CsaV3_5G028820 Cucumis sativus L. HOM05D004208 ORTHO05D005156 3.4e-166 589.0 491 63.3
CAN.G134.214 Capsicum annuum HOM05D004208 ORTHO05D005156 3.8e-165 585.5 494 61.1
Peaxi162Scf00225g00519 Petunia axillaris HOM05D004208 ORTHO05D005156 8.5e-165 584.3 511 60.1
SalBow1G3185 Salvia bowleyana HOM05D004208 ORTHO05D005156 1.4e-164 583.6 494 62.6
Lsat_1_v5_gn_7_79121 Lactuca sativa HOM05D004208 ORTHO05D005156 5.5e-164 581.6 492 64.0
AUR62030125 Chenopodium quinoa HOM05D004208 ORTHO05D005156 7.2e-164 581.3 492 60.8
Sed0002598 Sechium edule HOM05D004208 ORTHO05D005156 1.2e-163 580.5 490 63.9
MSTRG.16949 Avicennia marina HOM05D004208 ORTHO05D005156 1.6e-163 580.1 492 62.4
FAN17G2653 Fragaria x ananassa HOM05D004208 ORTHO05D005156 2.7e-163 579.3 490 63.5
AUR62038602 Chenopodium quinoa HOM05D004208 ORTHO05D005156 7.9e-163 577.8 492 60.8
PSO339G3828 Papaver somniferum HOM05D004208 ORTHO05D005156 7.9e-163 577.8 493 61.7
SGA_v2.0_scaffold32G13335 Striga asiatica HOM05D004208 ORTHO05D005156 1.0e-162 577.4 493 62.7
FvH4_4g12040 Fragaria vesca HOM05D004208 ORTHO05D005156 2.3e-162 576.2 490 63.1
Sabra05G0173200 Salix brachista HOM05D004208 ORTHO05D005156 2.3e-162 576.2 507 62.7
Oeu062471.2 Olea europaea HOM05D004208 ORTHO05D005156 3.0e-162 575.9 544 60.8
HanXRQChr16g0512021 Helianthus annuus HOM05D004208 ORTHO05D005156 8.8e-162 574.3 493 64.5
TWI32G0756 Tripterygium wilfordii HOM05D004208 ORTHO05D005156 1.7e-160 570.1 490 62.9
MD05G1197100 Malus domestica HOM05D004208 ORTHO05D005156 6.3e-160 568.2 498 62.7
Aa31LG8G17460 Aethionema arabicum HOM05D004208 ORTHO05D005156 1.1e-159 567.4 493 60.2
FAN07G0785 Fragaria x ananassa HOM05D004208 ORTHO05D005156 1.8e-159 566.6 521 59.3
Nitab4.5_0000245g0150 Nicotiana tabacum HOM05D004208 ORTHO05D005156 9.1e-159 564.3 489 61.3
Nn3g19657 Nelumbo nucifera HOM05D004208 ORTHO05D005156 5.9e-158 561.6 492 63.4
Ah.03g147410 Amaranthus hybridus HOM05D004208 ORTHO05D005156 1.3e-157 560.5 494 59.9
FvH4_2g21470 Fragaria vesca HOM05D004208 ORTHO05D005156 1.3e-157 560.5 490 62.4
CSS0015888 Camellia sinensis var. sinensis HOM05D004208 ORTHO05D005156 2.2e-157 559.7 466 70.0
FAN20G2986 Fragaria x ananassa HOM05D004208 ORTHO05D005156 2.2e-157 559.7 482 60.6
AL4G32160 Arabidopsis lyrata HOM05D004208 ORTHO05D005156 8.5e-157 557.8 490 58.2
AT2G36070 Arabidopsis thaliana HOM05D004208 ORTHO05D005156 1.1e-156 557.4 490 58.4
Sabra02G0030700 Salix brachista HOM05D004208 ORTHO05D005156 1.5e-156 557.0 460 67.6
Eucgr.G01944 Eucalyptus grandis HOM05D004208 ORTHO05D005156 5.5e-156 555.1 402 69.7
FAN27G3501 Fragaria x ananassa HOM05D004208 ORTHO05D005156 5.5e-156 555.1 477 61.2
SGA_v2.0_scaffold58G20323 Striga asiatica HOM05D004208 ORTHO05D005156 9.4e-156 554.3 407 70.0
Glyma.04G107400 Glycine max HOM05D004208 ORTHO05D005156 8.0e-155 551.2 490 61.2
Ah.02g120380 Amaranthus hybridus HOM05D004208 ORTHO05D005156 1.8e-154 550.1 493 59.4
MBI10_g22594_MAGBIO Magnolia biondii HOM05D004208 ORTHO05D005156 2.0e-153 546.6 468 64.5
FAN15G2877 Fragaria x ananassa HOM05D004208 ORTHO05D005156 9.7e-153 544.3 513 57.3
Phvul.005G002100 Phaseolus vulgaris HOM05D004208 ORTHO05D005156 1.3e-152 543.9 496 60.1
EL10Ac7g17258 Beta vulgaris HOM05D004208 ORTHO05D005156 1.1e-151 540.8 444 62.6
Carub.0004s1781 Capsella rubella HOM05D004208 ORTHO05D005156 1.8e-151 540.0 490 57.1
AL3G53520 Arabidopsis lyrata HOM05D004208 ORTHO05D005156 2.4e-151 539.7 491 57.8
DCAR_005689 Daucus carota HOM05D004208 ORTHO05D005156 9.1e-151 537.7 510 56.5
Peaxi162Scf00225g00527 Petunia axillaris HOM05D004208 ORTHO05D005156 1.6e-150 537.0 496 57.9
TAR362G0204 Trochodendron aralioides HOM05D004208 ORTHO05D005156 5.9e-150 535.0 451 65.0
FAN24G2300 Fragaria x ananassa HOM05D004208 ORTHO05D005156 8.5e-149 531.2 468 59.8
ATR0736G190 Amborella trichopoda HOM05D004208 ORTHO05D005156 7.2e-148 528.1 498 57.2
Thhalv10001977m.g Eutrema salsugineum HOM05D004208 ORTHO05D005156 8.0e-147 524.6 490 56.5
Cpa.g.sc81.94 Carica papaya HOM05D004208 ORTHO05D005156 2.0e-145 520.0 481 59.0
VMungo1080G0701 Vigna mungo HOM05D004208 ORTHO05D005156 2.2e-144 516.5 490 58.0
AT2G20510 Arabidopsis thaliana HOM05D004208 ORTHO05D005156 1.8e-143 513.5 490 57.3
Psat7g228960 Pisum sativum HOM05D004208 ORTHO05D005156 5.4e-143 511.9 490 56.7
Ca_26001_v3 Cicer arietinum L. HOM05D004208 ORTHO05D005156 3.8e-141 505.8 497 56.1
RcHm_v2.0_Chr4g0409381 Rosa chinensis HOM05D004208 ORTHO05D005156 1.5e-140 503.8 436 60.3
THA.LOC104805532 Tarenaya hassleriana HOM05D004208 ORTHO05D005156 1.5e-140 503.8 491 58.9
Nitab4.5_0001165g0160 Nicotiana tabacum HOM05D004208 ORTHO05D005156 1.9e-140 503.4 453 59.6
Eucgr.B01552 Eucalyptus grandis HOM05D004208 ORTHO05D005156 6.1e-139 498.4 510 55.1
arahy.Tifrunner.gnm1.ann1.W57KUE Arachis hypogaea HOM05D004208 ORTHO05D005156 6.8e-138 495.0 522 53.6
BcaB07g31584 Brassica carinata HOM05D004208 ORTHO05D005156 7.5e-137 491.5 482 55.0
TWI34G1830 Tripterygium wilfordii HOM05D004208 ORTHO05D005156 7.5e-137 491.5 490 56.3
Lalb_Chr15g0090311 Lupinus albus HOM05D004208 ORTHO05D005156 9.8e-137 491.1 498 57.6
Aqoxy2G03649 Aquilegia oxysepala HOM05D004208 ORTHO05D005156 2.8e-136 489.6 494 53.6
MELO3C033986.2 Cucumis melo HOM05D004208 ORTHO05D005156 2.8e-136 489.6 590 49.2
BraA09t36939Z Brassica rapa HOM05D004208 ORTHO05D005156 6.3e-136 488.4 493 54.2
Medtr2g083690 Medicago truncatula HOM05D004208 ORTHO05D005156 1.1e-135 487.6 490 55.1
Sp3g33730 Schrenkiella parvula HOM05D004208 ORTHO05D005156 3.1e-135 486.1 498 53.4
C09p15320 Brassica napus HOM05D004208 ORTHO05D005156 7.0e-135 485.0 491 54.6
A09p12940 Brassica napus HOM05D004208 ORTHO05D005156 1.2e-134 484.2 490 54.3
FAN12G3775 Fragaria x ananassa HOM05D004208 ORTHO05D005156 3.5e-134 482.6 540 51.7
FAN12G0345 Fragaria x ananassa HOM05D004208 ORTHO05D005156 4.5e-134 482.3 540 51.7
CDE04G1955 Ceratophyllum demersum HOM05D004208 ORTHO05D005156 1.0e-133 481.1 393 64.4
Carub.0003s3496 Capsella rubella HOM05D004208 ORTHO05D005156 2.9e-133 479.6 491 55.6
ECA236G3853 Erigeron canadensis HOM05D004208 ORTHO05D000364 2.5e-132 476.5 476 59.0
BolC9t54440H Brassica oleracea HOM05D004208 ORTHO05D005156 4.3e-132 475.7 491 52.5
HPP92_012187 Vanilla planifolia HOM05D004208 ORTHO05D005156 5.6e-132 475.3 472 54.9
BcaC04g22784 Brassica carinata HOM05D004208 ORTHO05D005156 9.5e-132 474.6 490 52.4
BolC7t40497H Brassica oleracea HOM05D004208 ORTHO05D005156 1.6e-131 473.8 490 55.5
Oeu042777.2 Olea europaea HOM05D004208 ORTHO05D005156 2.8e-131 473.0 498 55.0
BcaB03g16846 Brassica carinata HOM05D004208 ORTHO05D005156 1.0e-130 471.1 495 52.5
BraA07t27815Z Brassica rapa HOM05D004208 ORTHO05D005156 1.4e-130 470.7 490 53.9
BcaC06g36740 Brassica carinata HOM05D004208 ORTHO05D005156 6.8e-130 468.4 490 55.1
CARHR130310 Cardamine hirsuta HOM05D004208 ORTHO05D005156 3.4e-129 466.1 490 53.1
BcaB08g34912 Brassica carinata HOM05D004208 ORTHO05D005156 2.9e-128 463.0 477 53.0
A07p00220 Brassica napus HOM05D004208 ORTHO05D005156 4.9e-128 462.2 490 53.1
TPR.G5025 Trifolium pratense HOM05D004208 ORTHO05D005156 8.3e-128 461.5 404 58.4
arahy.Tifrunner.gnm1.ann1.M6MGA2 Arachis hypogaea HOM05D004208 ORTHO05D005156 5.4e-127 458.8 489 53.2
Medtr4g075680 Medicago truncatula HOM05D004208 ORTHO05D005156 2.3e-125 453.4 490 51.6
Zm00001eb111900 Zea mays HOM05D004208 ORTHO05D005156 5.0e-125 452.2 465 52.5
C07p00510 Brassica napus HOM05D004208 ORTHO05D005156 8.9e-122 441.4 490 52.9
Nitab4.5_0001526g0060 Nicotiana tabacum HOM05D004208 ORTHO05D005156 2.2e-112 410.2 449 52.1
Os07g0409700 Oryza sativa ssp. japonica HOM05D004208 ORTHO05D005156 2.1e-110 403.7 493 47.7
Medtr4g029490 Medicago truncatula HOM05D004208 ORTHO05D005156 4.6e-110 402.5 490 48.0
Oeu021968.1 Olea europaea HOM05D004208 ORTHO05D005156 7.8e-110 401.7 482 50.8
Peaxi162Scf00118g00111 Petunia axillaris HOM05D004208 ORTHO05D005156 1.0e-109 401.4 396 55.6
Nitab4.5_0007798g0030 Nicotiana tabacum HOM05D004208 ORTHO05D005156 1.9e-108 397.1 492 48.6
Lj6g0013651 Lotus japonicus HOM05D004208 ORTHO05D005156 7.8e-102 375.2 492 44.7
PGSC0003DMG400022489 Solanum tuberosum HOM05D004208 ORTHO05D005156 5.2e-98 362.5 216 79.2
Sc05g0000700 Simmondsia chinensis HOM05D004208 ORTHO05D005156 4.2e-95 352.8 352 57.7
ClCG01G005870 Citrullus lanatus HOM05D004208 ORTHO05D005156 1.5e-92 344.4 216 75.5
CBR_g30902 Chara braunii HOM05D004208 ORTHO05D005156 4.3e-92 342.8 453 43.0
SMO353G0191 Selaginella moellendorffii HOM05D004208 ORTHO05D005156 6.2e-91 339.0 448 44.4
SEGI_36648 Sequoiadendron giganteum HOM05D004208 ORTHO05D005156 1.8e-90 337.4 414 48.6
BcaC07g41210 Brassica carinata HOM05D004208 ORTHO05D005156 1.2e-89 334.7 413 48.2
Mapoly0070s0010 Marchantia polymorpha HOM05D004208 ORTHO05D005156 2.1e-86 323.9 377 46.7
unitig_746.g26574 Utricularia gibba HOM05D004208 ORTHO05D005156 1.8e-82 310.8 222 64.9
Pp3c4_19960 Physcomitrium patens HOM05D004208 ORTHO05D005156 3.1e-82 310.1 356 46.3
Pp3c12_7570 Physcomitrium patens HOM05D004208 ORTHO05D005156 2.2e-80 303.9 292 51.0
AagrBONN_evm.TU.Sc2ySwM_344.3623 Anthoceros agrestis HOM05D004208 ORTHO05D005156 8.4e-80 302.0 321 49.5
Lalb_Chr06g0171061 Lupinus albus HOM05D004208 ORTHO05D005156 1.3e-67 261.5 176 71.0
Actinidia37513 Actinidia chinensis HOM05D004208 ORTHO05D005156 5.1e-61 239.6 156 78.8
Lalb_Chr06g0171071 Lupinus albus HOM05D004208 ORTHO05D005156 4.8e-59 233.0 321 51.1
HanXRQChr10g0294161 Helianthus annuus HOM05D004208 ORTHO05D005156 1.2e-54 218.4 216 57.9
SEGI_05587 Sequoiadendron giganteum HOM05D004208 ORTHO05D005156 1.0e-53 215.3 135 73.3
MCO02G332 Micromonas commoda HOM05D004208 ORTHO05D005156 5.2e-45 186.4 247 40.1
SHI09778 Sapria himalayana HOM05D004208 ORTHO05D005156 7.7e-41 172.6 273 42.9
Cre16.g660800 Chlamydomonas reinhardtii HOM05D004208 ORTHO05D005156 4.8e-35 153.3 244 33.2
CAN.G279.25 Capsicum annuum HOM05D004208 ORTHO05D005156 2.4e-34 151.0 227 41.9
RcHm_v2.0_Chr5g0013581 Rosa chinensis HOM05D004208 ORTHO05D005156 2.7e-33 147.5 94 70.2
PRCOL_00004598 Prasinoderma coloniale HOM05D004208 ORTHO05D005156 7.7e-33 146.0 190 37.4
Rhsim01G0263500 Rhododendron simsii HOM05D004208 ORTHO05D005156 7.2e-31 139.4 122 65.6
Glyma.09G002800 Glycine max HOM05D004208 ORTHO05D005156 7.0e-26 122.9 76 71.1
SEGI_40921 Sequoiadendron giganteum HOM05D004208 ORTHO05D005156 2.9e-24 117.5 72 73.6
Aqoxy5G04369 Aquilegia oxysepala HOM05D004870 ORTHO05D006061 2.4e-18 97.8 117 52.1
Atru.chr3.4028 Acer truncatum HOM05D004208 ORTHO05D005156 9.2e-18 95.9 56 76.8
Cfa026408 Carpinus fangiana HOM05D004208 ORTHO05D121639 8.6e-16 89.4 241 25.7
CDE04G1040 Ceratophyllum demersum HOM05D004208 ORTHO05D005156 2.9e-11 74.3 76 55.3
QL04p049599 Quercus lobata HOM05D000196 ORTHO05D000279 1.1e-10 72.4 43 79.1
MD09G1008600 Malus domestica HOM05D004208 ORTHO05D005156 1.6e-09 68.6 74 50.0
HanXRQChr10g0299451 Helianthus annuus HOM05D004208 ORTHO05D219928 2.3e-08 64.7 97 36.1
FvH4_3g18772 Fragaria vesca HOM05D004208 ORTHO05D198159 2.5e-07 61.2 62 54.8


User provided reference genes

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