Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038396 Camellia sinensis var. sinensis HOM05D007582 ORTHO05D009645 6.8e-60 233.8 119 100.0
Dinv07214 Davidia involucrata HOM05D007582 ORTHO05D009645 2.1e-45 185.7 118 82.2
RhsimUnG0092400 Rhododendron simsii HOM05D007582 ORTHO05D009645 1.2e-43 179.9 119 73.1
vmacro00836 Vaccinium macrocarpon HOM05D007582 ORTHO05D009645 2.0e-43 179.1 119 77.3
Solyc06g060300.1 Solanum lycopersicum HOM05D007582 ORTHO05D009645 1.1e-41 173.3 119 67.2
Oeu028565.1 Olea europaea HOM05D007582 ORTHO05D009645 1.4e-41 172.9 119 66.4
Sopen06g020420 Solanum pennellii HOM05D007582 ORTHO05D009645 1.9e-41 172.6 119 67.2
Atru.chr13.1488 Acer truncatum HOM05D007582 ORTHO05D009645 3.2e-41 171.8 119 67.2
Migut.N03282 Erythranthe guttata HOM05D007582 ORTHO05D009645 2.7e-40 168.7 119 67.2
Aqoxy6G00171 Aquilegia oxysepala HOM05D007582 ORTHO05D009645 3.5e-40 168.3 123 65.9
SGA_v2.0_scaffold28G11996 Striga asiatica HOM05D007582 ORTHO05D009645 7.9e-40 167.2 119 68.9
CAN.G1040.1 Capsicum annuum HOM05D007582 ORTHO05D009645 1.0e-39 166.8 119 64.7
Nitab4.5_0003719g0010 Nicotiana tabacum HOM05D007582 ORTHO05D009645 1.0e-39 166.8 122 64.8
Potri.002G083100 Populus trichocarpa HOM05D007582 ORTHO05D009645 1.3e-39 166.4 119 64.7
PGSC0003DMG400041136 Solanum tuberosum HOM05D007582 ORTHO05D009645 1.8e-39 166.0 119 65.5
Cc10_g11990 Coffea canephora HOM05D007582 ORTHO05D009645 3.0e-39 165.2 119 69.7
QL09p034466 Quercus lobata HOM05D007582 ORTHO05D009645 3.9e-39 164.9 118 65.3
CiPaw.05G221000 Carya illinoinensis HOM05D007582 ORTHO05D009645 5.1e-39 164.5 119 66.4
MSTRG.22408 Avicennia marina HOM05D007582 ORTHO05D009645 6.7e-39 164.1 119 64.7
CAN.G1040.3 Capsicum annuum HOM05D007582 ORTHO05D009645 8.7e-39 163.7 119 63.9
Manes.02G163800 Manihot esculenta HOM05D007582 ORTHO05D009645 1.5e-38 162.9 119 64.7
Lj4P628T29 Lonicera japonica HOM05D007582 ORTHO05D009645 3.3e-38 161.8 119 66.4
Peaxi162Scf00051g00105 Petunia axillaris HOM05D007582 ORTHO05D009645 3.3e-38 161.8 115 65.2
PGR042G2864 Punica granatum HOM05D007582 ORTHO05D009645 5.6e-38 161.0 118 63.6
Sc22g0004000 Simmondsia chinensis HOM05D007582 ORTHO05D009645 5.6e-38 161.0 119 63.0
MD15G1347500 Malus domestica HOM05D007582 ORTHO05D009645 9.6e-38 160.2 117 62.4
Nn5g28305 Nelumbo nucifera HOM05D007582 ORTHO05D009645 9.6e-38 160.2 119 63.0
Thecc.08G126100 Theobroma cacao HOM05D007582 ORTHO05D009645 9.6e-38 160.2 119 63.0
PSO528G0093 Papaver somniferum HOM05D007582 ORTHO05D009645 1.6e-37 159.5 119 63.0
SalBow6G5334 Salvia bowleyana HOM05D007582 ORTHO05D009645 2.8e-37 158.7 119 63.0
Hma1.2p1_0054F.1_g031010 Hydrangea macrophylla HOM05D007582 ORTHO05D009645 4.8e-37 157.9 119 63.9
MELO3C010615.2 Cucumis melo HOM05D007582 ORTHO05D009645 6.2e-37 157.5 119 62.2
Manes.18G077606 Manihot esculenta HOM05D007582 ORTHO05D009645 1.1e-36 156.8 119 61.3
Aqoxy6G00227 Aquilegia oxysepala HOM05D007582 ORTHO05D009645 1.8e-36 156.0 116 64.7
TWI34G1919 Tripterygium wilfordii HOM05D007582 ORTHO05D009645 1.8e-36 156.0 126 59.5
TAR381G0802 Trochodendron aralioides HOM05D007582 ORTHO05D009645 1.8e-36 156.0 119 61.3
ClCG08G005690 Citrullus lanatus HOM05D007582 ORTHO05D009645 3.1e-36 155.2 119 60.5
Haze_00435 Corylus avellana HOM05D007582 ORTHO05D009645 3.1e-36 155.2 119 63.0
Ciclev10002916m.g Citrus clementina HOM05D007582 ORTHO05D009645 4.0e-36 154.8 119 60.5
ATR0584G060 Amborella trichopoda HOM05D007582 ORTHO05D009645 5.3e-36 154.5 119 62.2
PSO170G1805 Papaver somniferum HOM05D007582 ORTHO05D009645 6.9e-36 154.1 119 60.5
Prupe.1G495300 Prunus persica HOM05D007582 ORTHO05D009645 6.9e-36 154.1 120 60.0
Nn1g00264 Nelumbo nucifera HOM05D007582 ORTHO05D009645 2.0e-35 152.5 118 61.0
THA.LOC104817375 Tarenaya hassleriana HOM05D007582 ORTHO05D009645 2.0e-35 152.5 119 59.7
Cpa.g.sc64.90 Carica papaya HOM05D007582 ORTHO05D009645 3.4e-35 151.8 119 61.3
RcHm_v2.0_Chr6g0295891 Rosa chinensis HOM05D007582 ORTHO05D009645 3.4e-35 151.8 119 58.8
AL1G52300 Arabidopsis lyrata HOM05D007582 ORTHO05D009645 7.6e-35 150.6 119 58.0
AT1G44414 Arabidopsis thaliana HOM05D007582 ORTHO05D009645 7.6e-35 150.6 119 58.0
CANSAT11G2348 Cannabis sativa HOM05D007582 ORTHO05D009645 1.0e-34 150.2 119 61.3
FAN15G1067 Fragaria x ananassa HOM05D007582 ORTHO05D009645 1.0e-34 150.2 119 58.0
Duzib116G0545 Durio zibethinus HOM05D007582 ORTHO05D009645 3.8e-34 148.3 123 59.3
BcaB07g33949 Brassica carinata HOM05D007582 ORTHO05D009645 4.9e-34 147.9 119 56.3
Thhalv10012348m.g Eutrema salsugineum HOM05D007582 ORTHO05D009645 4.9e-34 147.9 119 55.5
HanXRQChr15g0465231 Helianthus annuus HOM05D007582 ORTHO05D009645 4.9e-34 147.9 119 59.7
Sp1g33530 Schrenkiella parvula HOM05D007582 ORTHO05D009645 6.5e-34 147.5 119 56.3
CARHR035920 Cardamine hirsuta HOM05D007582 ORTHO05D009645 8.4e-34 147.1 119 55.5
Lj1g0018777 Lotus japonicus HOM05D007582 ORTHO05D009645 8.4e-34 147.1 122 57.4
CDE06G0523 Ceratophyllum demersum HOM05D007582 ORTHO05D009645 1.9e-33 146.0 126 54.8
Lalb_Chr17g0343701 Lupinus albus HOM05D007582 ORTHO05D009645 2.5e-33 145.6 119 56.3
A06p11790 Brassica napus HOM05D007582 ORTHO05D009645 5.5e-33 144.4 119 55.5
Carub.0001s3518 Capsella rubella HOM05D007582 ORTHO05D009645 9.3e-33 143.7 119 56.3
Aa31LG6G9350 Aethionema arabicum HOM05D007582 ORTHO05D009645 1.6e-32 142.9 119 53.8
HPP92_006841 Vanilla planifolia HOM05D007582 ORTHO05D009645 2.1e-32 142.5 119 54.6
Glyma.14G150500 Glycine max HOM05D007582 ORTHO05D009645 4.6e-32 141.4 120 53.3
Gohir.D06G045500 Gossypium hirsutum HOM05D007582 ORTHO05D009645 4.6e-32 141.4 109 61.5
VMungo0647G1492 Vigna mungo HOM05D007582 ORTHO05D009645 6.0e-32 141.0 119 54.6
BolC6t35199H Brassica oleracea HOM05D007582 ORTHO05D009645 1.3e-31 139.8 119 56.3
Medtr1g029990 Medicago truncatula HOM05D007582 ORTHO05D009645 1.3e-31 139.8 119 55.5
TPR.G25776 Trifolium pratense HOM05D007582 ORTHO05D009645 1.3e-31 139.8 119 52.9
Gorai.010G050500 Gossypium raimondii HOM05D007582 ORTHO05D009645 2.3e-31 139.0 109 60.6
DCAR_016167 Daucus carota HOM05D007582 ORTHO05D009645 5.1e-31 137.9 120 57.5
BcaC08g42847 Brassica carinata HOM05D007582 ORTHO05D009645 1.1e-30 136.7 119 55.5
C06p00630 Brassica napus HOM05D007582 ORTHO05D009645 1.1e-30 136.7 119 55.5
arahy.Tifrunner.gnm1.ann1.WSBZ3R Arachis hypogaea HOM05D007582 ORTHO05D009645 1.5e-30 136.3 102 62.7
Zm00001eb348620 Zea mays HOM05D007582 ORTHO05D009645 1.5e-30 136.3 119 55.5
Sed0002225 Sechium edule HOM05D007582 ORTHO05D009645 1.9e-30 136.0 117 63.2
Phvul.008G160900 Phaseolus vulgaris HOM05D007582 ORTHO05D009645 7.4e-30 134.0 119 51.3
Phvul.008G167875 Phaseolus vulgaris HOM05D007582 ORTHO05D009645 7.4e-30 134.0 119 51.3
CsaV3_6G034440 Cucumis sativus L. HOM05D007582 ORTHO05D009645 9.6e-30 133.7 109 56.9
SHI08583 Sapria himalayana HOM05D007582 ORTHO05D009645 8.2e-29 130.6 119 52.9
ECA233G1368 Erigeron canadensis HOM05D007582 ORTHO05D009645 1.8e-28 129.4 113 54.9
Gohir.A06G045000 Gossypium hirsutum HOM05D007582 ORTHO05D009645 1.3e-26 123.2 71 76.1
Os05g0435400 Oryza sativa ssp. japonica HOM05D007582 ORTHO05D009645 3.8e-26 121.7 120 54.2
Psat6g041680 Pisum sativum HOM05D007582 ORTHO05D009139 8.4e-26 120.6 106 50.9
Nn3g18690 Nelumbo nucifera HOM05D007582 ORTHO05D009645 7.2e-25 117.5 119 48.7
SMO143G0209 Selaginella moellendorffii HOM05D007582 ORTHO05D009645 2.3e-23 112.5 118 44.9
Mapoly0085s0071 Marchantia polymorpha HOM05D007582 ORTHO05D009645 1.9e-17 92.8 119 36.1
Nitab4.5_0011334g0030 Nicotiana tabacum HOM05D007582 ORTHO05D009645 4.2e-17 91.7 89 51.7
Pp3c19_19360 Physcomitrium patens HOM05D007582 ORTHO05D009645 1.0e-15 87.0 122 38.5
Nn4g24512 Nelumbo nucifera HOM05D007582 ORTHO05D009645 1.8e-15 86.3 78 51.3
AagrBONN_evm.TU.Sc2ySwM_362.1959 Anthoceros agrestis HOM05D007582 ORTHO05D009645 3.8e-10 68.6 65 49.2
Nn1g08790 Nelumbo nucifera HOM05D007582 ORTHO05D009645 4.2e-09 65.1 35 77.1
Aa31LG6G9370 Aethionema arabicum HOM05D007582 ORTHO05D009645 9.4e-09 63.9 119 36.1
AagrBONN_evm.TU.Sc2ySwM_362.2461 Anthoceros agrestis HOM05D007582 ORTHO05D009645 1.6e-08 63.2 67 43.3
Phvul.L001669 Phaseolus vulgaris HOM05D007582 ORTHO05D009645 5.1e-07 58.2 42 61.9


User provided reference genes

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