Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038381 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D009184 9.5e-52 206.5 97 100.0
QL05p080279 Quercus lobata HOM05D000002 ORTHO05D009184 5.4e-31 137.5 93 67.7
QL10p046058 Quercus lobata HOM05D000002 ORTHO05D000001 5.4e-31 137.5 93 67.7
CSS0015301 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.3e-28 128.3 94 62.8
CSS0022698 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.7e-27 124.8 94 61.7
TAR654G0001 Trochodendron aralioides HOM05D000002 ORTHO05D009184 3.7e-27 124.8 90 65.6
CSS0018707 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.2e-27 124.0 94 60.6
TWI79G1259 Tripterygium wilfordii HOM05D000002 ORTHO05D009184 1.5e-25 119.4 91 65.9
QL02p054488 Quercus lobata HOM05D000002 ORTHO05D000001 8.4e-24 113.6 90 56.7
PSO541G2535 Papaver somniferum HOM05D000002 ORTHO05D009184 3.3e-20 101.7 95 49.5
PSO832G0651 Papaver somniferum HOM05D000002 ORTHO05D009184 1.3e-19 99.8 95 49.5
Rhsim10G0063800 Rhododendron simsii HOM05D000345 ORTHO05D009184 6.2e-19 97.4 90 50.0
Hund00625 Selenicereus undatus HOM05D000002 ORTHO05D009184 1.2e-17 93.2 103 48.5
COL.COLO4_26578 Corchorus olitorius HOM05D000002 ORTHO05D009184 2.6e-17 92.0 90 48.9
COL.COLO4_27409 Corchorus olitorius HOM05D000002 ORTHO05D009184 4.5e-17 91.3 90 44.4
Hund23444 Selenicereus undatus HOM05D000002 ORTHO05D009184 1.3e-16 89.7 103 50.5
PSO384G3605 Papaver somniferum HOM05D000002 ORTHO05D009184 2.2e-16 89.0 90 47.8
Thhalv10001136m.g Eutrema salsugineum HOM05D000002 ORTHO05D009184 6.5e-16 87.4 88 48.9
Hund24530 Selenicereus undatus HOM05D000002 ORTHO05D009184 1.9e-15 85.9 103 49.5
Hund26216 Selenicereus undatus HOM05D000002 ORTHO05D009184 2.5e-15 85.5 103 48.5
Thhalv10003350m.g Eutrema salsugineum HOM05D000002 ORTHO05D009184 3.2e-15 85.1 89 46.1
Hund16236 Selenicereus undatus HOM05D003328 ORTHO05D003722 5.5e-15 84.3 99 50.5
Thhalv10029402m.g Eutrema salsugineum HOM05D000002 ORTHO05D009184 1.6e-14 82.8 89 44.9
Hund22099 Selenicereus undatus HOM05D026553 ORTHO05D009184 6.0e-14 80.9 102 43.1
Hund21145 Selenicereus undatus HOM05D000002 ORTHO05D009184 7.9e-14 80.5 96 42.7
Thhalv10023107m.g Eutrema salsugineum HOM05D000002 ORTHO05D009184 1.0e-13 80.1 89 44.9
Hund23381 Selenicereus undatus HOM05D000002 ORTHO05D009184 1.3e-13 79.7 98 41.8
Hund15821 Selenicereus undatus HOM05D000002 ORTHO05D009184 9.7e-12 73.6 98 38.8
Hund05632 Selenicereus undatus HOM05D000002 ORTHO05D009184 2.2e-11 72.4 85 43.5
Hund00834 Selenicereus undatus HOM05D003918 ORTHO05D004494 3.7e-11 71.6 101 40.6
HanXRQChr16g0510691 Helianthus annuus HOM05D000002 ORTHO05D009184 3.1e-10 68.6 80 38.8
Thhalv10003344m.g Eutrema salsugineum HOM05D000002 ORTHO05D009184 1.2e-09 66.6 82 45.1
COL.COLO4_15637 Corchorus olitorius HOM05D000002 ORTHO05D009184 2.9e-08 62.0 53 54.7
MBI15_g38683_MAGBIO Magnolia biondii HOM05D011675 ORTHO05D014657 1.1e-07 60.1 97 29.9
CSS0029189 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.4e-07 59.7 54 50.0
Cpa.g.sc57.43 Carica papaya HOM05D000002 ORTHO05D009184 2.5e-07 58.9 64 48.4
COL.COLO4_34309 Corchorus olitorius HOM05D000002 ORTHO05D009184 2.1e-06 55.8 61 44.3
Hund06699 Selenicereus undatus HOM05D026553 ORTHO05D009184 2.7e-06 55.5 46 56.5
Cpa.g.sc2653.1 Carica papaya HOM05D000002 ORTHO05D009184 6.1e-06 54.3 70 38.6
COL.COLO4_12798 Corchorus olitorius HOM05D000002 ORTHO05D009184 7.9e-06 53.9 36 58.3


User provided reference genes

Program Settings