Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038343 Camellia sinensis var. sinensis HOM05D004964 ORTHO05D005918 1.0e-232 809.7 405 100.0
CSS0014360 Camellia sinensis var. sinensis HOM05D004964 ORTHO05D005918 2.0e-196 689.1 428 84.6
Rhsim09G0136900 Rhododendron simsii HOM05D004964 ORTHO05D005918 8.9e-144 514.2 429 64.3
vmacro10367 Vaccinium macrocarpon HOM05D004964 ORTHO05D005918 3.3e-122 442.6 468 53.4
TAR362G0358 Trochodendron aralioides HOM05D004964 ORTHO05D005918 2.5e-114 416.4 400 55.0
Lj2A43G39 Lonicera japonica HOM05D004964 ORTHO05D005918 5.6e-114 415.2 400 56.8
GSVIVG01023502001 Vitis vinifera HOM05D004964 ORTHO05D005918 3.8e-110 402.5 399 56.1
MD04G1230400 Malus domestica HOM05D004964 ORTHO05D005918 1.9e-106 390.2 399 54.4
QL03p029942 Quercus lobata HOM05D004964 ORTHO05D005918 6.9e-104 381.7 399 52.6
Manes.08G139500 Manihot esculenta HOM05D004964 ORTHO05D005918 2.6e-103 379.8 402 52.7
Dinv18988 Davidia involucrata HOM05D004964 ORTHO05D005918 4.2e-101 372.5 302 66.6
CAN.G588.60 Capsicum annuum HOM05D004964 ORTHO05D005918 5.5e-101 372.1 405 50.4
Solyc01g111410.3 Solanum lycopersicum HOM05D004964 ORTHO05D005918 2.1e-100 370.2 405 50.9
Sopen01g053470 Solanum pennellii HOM05D004964 ORTHO05D005918 1.8e-99 367.1 405 50.6
Nn4g26424 Nelumbo nucifera HOM05D004964 ORTHO05D005918 1.1e-98 364.4 397 50.6
PGSC0003DMG401006195 Solanum tuberosum HOM05D004964 ORTHO05D005918 4.3e-98 362.5 405 50.1
Prupe.6G350300 Prunus persica HOM05D004964 ORTHO05D005918 5.7e-98 362.1 382 52.6
Thecc.05G270700 Theobroma cacao HOM05D004964 ORTHO05D005918 9.7e-98 361.3 397 54.4
QL03p029974 Quercus lobata HOM05D004964 ORTHO05D005918 1.3e-97 360.9 399 51.1
Cfa006356 Carpinus fangiana HOM05D004964 ORTHO05D005918 3.7e-97 359.4 398 51.8
Cpa.g.sc162.40 Carica papaya HOM05D004964 ORTHO05D005918 6.3e-97 358.6 399 50.4
FvH4_6g01921 Fragaria vesca HOM05D004964 ORTHO05D005918 2.4e-96 356.7 403 51.4
FAN14G2205 Fragaria x ananassa HOM05D004964 ORTHO05D005918 1.2e-95 354.4 403 51.1
Peaxi162Scf00407g00626 Petunia axillaris HOM05D004964 ORTHO05D005918 1.5e-95 354.0 382 50.8
Duzib106G0302 Durio zibethinus HOM05D004964 ORTHO05D005918 3.4e-95 352.8 398 53.0
RcHm_v2.0_Chr3g0449661 Rosa chinensis HOM05D004964 ORTHO05D005918 5.9e-95 352.1 401 50.1
Cc02_g08800 Coffea canephora HOM05D004964 ORTHO05D005918 7.7e-95 351.7 398 49.2
CiPaw.07G072600 Carya illinoinensis HOM05D004964 ORTHO05D005918 1.7e-94 350.5 418 48.6
Gohir.D08G234400 Gossypium hirsutum HOM05D004964 ORTHO05D005918 2.5e-93 346.7 399 51.9
VMungo0331G1958 Vigna mungo HOM05D004964 ORTHO05D005918 2.5e-93 346.7 414 50.0
Gorai.004G249200 Gossypium raimondii HOM05D004964 ORTHO05D005918 3.2e-93 346.3 399 51.9
Sabra13G0043100 Salix brachista HOM05D004964 ORTHO05D005918 3.2e-93 346.3 328 57.3
FAN05G4025 Fragaria x ananassa HOM05D004964 ORTHO05D005918 4.2e-93 345.9 393 51.9
FAN05G4826 Fragaria x ananassa HOM05D004964 ORTHO05D005918 5.5e-93 345.5 393 51.7
FAN14G5822 Fragaria x ananassa HOM05D004964 ORTHO05D005918 2.1e-92 343.6 392 51.5
QL03p030425 Quercus lobata HOM05D004964 ORTHO05D005918 1.8e-91 340.5 382 50.5
FAN02G1272 Fragaria x ananassa HOM05D004964 ORTHO05D005918 3.9e-91 339.3 404 49.8
Sc10g0001190 Simmondsia chinensis HOM05D004964 ORTHO05D005918 2.0e-90 337.0 399 49.4
Nitab4.5_0013387g0040 Nicotiana tabacum HOM05D004964 ORTHO05D005918 3.3e-90 336.3 389 48.6
Oeu016533.1 Olea europaea HOM05D004964 ORTHO05D005918 2.8e-89 333.2 400 51.2
HanXRQChr07g0204481 Helianthus annuus HOM05D004964 ORTHO05D005918 7.0e-88 328.6 402 47.8
Aqoxy4G00649 Aquilegia oxysepala HOM05D004964 ORTHO05D005918 1.2e-87 327.8 400 45.5
Aqoxy5G02134 Aquilegia oxysepala HOM05D004964 ORTHO05D005918 1.5e-87 327.4 400 45.2
AT1G10095 Arabidopsis thaliana HOM05D004964 ORTHO05D005918 1.5e-87 327.4 396 48.0
Lalb_Chr03g0040321 Lupinus albus HOM05D004964 ORTHO05D005918 4.5e-87 325.9 431 45.9
Migut.F00800 Erythranthe guttata HOM05D004964 ORTHO05D005918 1.3e-86 324.3 402 48.8
Ca_14064_v3 Cicer arietinum L. HOM05D004964 ORTHO05D005918 3.8e-86 322.8 417 47.5
Phvul.010G051000 Phaseolus vulgaris HOM05D004964 ORTHO05D005918 8.5e-86 321.6 412 47.6
AL1G20790 Arabidopsis lyrata HOM05D004964 ORTHO05D005918 1.4e-85 320.9 415 44.6
Sed0000191 Sechium edule HOM05D004964 ORTHO05D005918 1.4e-85 320.9 416 45.4
MELO3C008708.2 Cucumis melo HOM05D004964 ORTHO05D005918 2.5e-85 320.1 418 45.7
MBI07_g16903_MAGBIO Magnolia biondii HOM05D004964 ORTHO05D005918 2.1e-84 317.0 427 43.1
PSO210G1919 Papaver somniferum HOM05D004964 ORTHO05D005918 2.7e-84 316.6 403 46.2
Glyma.07G113400 Glycine max HOM05D004964 ORTHO05D005918 3.6e-84 316.2 412 47.1
Ciclev10020293m.g Citrus clementina HOM05D004964 ORTHO05D005918 6.1e-84 315.5 405 49.4
EL10Ac2g04577 Beta vulgaris HOM05D004964 ORTHO05D005918 6.7e-83 312.0 391 45.8
BcaC06g34559 Brassica carinata HOM05D004964 ORTHO05D005918 5.7e-82 308.9 419 46.1
BolC7t43245H Brassica oleracea HOM05D004964 ORTHO05D005918 5.7e-82 308.9 419 46.1
arahy.Tifrunner.gnm1.ann1.H9CC2T Arachis hypogaea HOM05D004964 ORTHO05D005918 9.7e-82 308.1 418 44.5
A06p47210 Brassica napus HOM05D004964 ORTHO05D005918 9.7e-82 308.1 417 45.6
Thhalv10000880m.g Eutrema salsugineum HOM05D004964 ORTHO05D005918 9.7e-82 308.1 399 46.1
BraA06t27592Z Brassica rapa HOM05D004964 ORTHO05D005918 2.8e-81 306.6 417 45.3
Psat4g225120 Pisum sativum HOM05D004964 ORTHO05D005918 2.8e-81 306.6 396 47.0
C07p27180 Brassica napus HOM05D004964 ORTHO05D005918 3.7e-81 306.2 419 45.8
Atru.chr2.987 Acer truncatum HOM05D004964 ORTHO05D005918 4.8e-81 305.8 400 46.8
Gohir.A08G217400 Gossypium hirsutum HOM05D004964 ORTHO05D005918 4.8e-81 305.8 399 48.4
CARHR010210 Cardamine hirsuta HOM05D004964 ORTHO05D005918 1.1e-80 304.7 420 44.8
TPR.G17496 Trifolium pratense HOM05D004964 ORTHO05D005918 1.8e-80 303.9 415 45.5
Carub.0001s0952 Capsella rubella HOM05D004964 ORTHO05D005918 3.1e-80 303.1 421 43.9
MSTRG.14348 Avicennia marina HOM05D004964 ORTHO05D005918 1.2e-79 301.2 398 45.5
Nitab4.5_0005396g0030 Nicotiana tabacum HOM05D004964 ORTHO05D005918 1.2e-79 301.2 324 50.0
Lsat_1_v5_gn_8_24860 Lactuca sativa HOM05D004964 ORTHO05D005918 2.6e-79 300.1 425 43.1
A09p21080 Brassica napus HOM05D004964 ORTHO05D005918 4.5e-79 299.3 405 45.4
Medtr8g006785 Medicago truncatula HOM05D004964 ORTHO05D005918 7.7e-79 298.5 444 43.9
TPR.G33137 Trifolium pratense HOM05D004964 ORTHO05D005918 7.7e-79 298.5 395 46.3
arahy.Tifrunner.gnm1.ann1.J3Q9FM Arachis hypogaea HOM05D004964 ORTHO05D005918 2.9e-78 296.6 418 42.8
AL1G47560 Arabidopsis lyrata HOM05D004964 ORTHO05D005918 3.8e-78 296.2 404 43.6
PSO210G0659 Papaver somniferum HOM05D004964 ORTHO05D005918 6.5e-78 295.4 384 46.1
BcaC06g31621 Brassica carinata HOM05D004964 ORTHO05D005918 2.5e-77 293.5 422 43.1
unitig_46.g18500 Utricularia gibba HOM05D004964 ORTHO05D005918 3.2e-77 293.1 406 43.6
unitig_47.g30763 Utricularia gibba HOM05D004964 ORTHO05D005918 3.2e-77 293.1 406 43.6
DCAR_022832 Daucus carota HOM05D004964 ORTHO05D005918 4.2e-77 292.7 403 45.2
Glyma.03G113500 Glycine max HOM05D004964 ORTHO05D005918 1.6e-76 290.8 425 45.2
SGA_v2.0_scaffold295G47511 Striga asiatica HOM05D004964 ORTHO05D005918 4.7e-76 289.3 406 44.6
Lj3g0015193 Lotus japonicus HOM05D004964 ORTHO05D005918 1.4e-75 287.7 409 43.8
Sp2g09220 Schrenkiella parvula HOM05D004964 ORTHO05D005918 2.8e-73 280.0 363 45.7
AUR62008995 Chenopodium quinoa HOM05D004964 ORTHO05D005918 4.1e-72 276.2 397 44.1
AUR62023306 Chenopodium quinoa HOM05D004964 ORTHO05D005918 9.1e-72 275.0 396 43.9
BraA09t37709Z Brassica rapa HOM05D004964 ORTHO05D005918 3.5e-71 273.1 405 43.5
CANSAT01G0497 Cannabis sativa HOM05D004964 ORTHO05D005918 7.7e-71 271.9 373 45.6
SGA_v2.0_scaffold26G11247 Striga asiatica HOM05D004964 ORTHO05D005918 2.9e-70 270.0 396 43.7
ECA233G3630 Erigeron canadensis HOM05D004964 ORTHO05D005918 1.9e-69 267.3 336 46.1
Hund13719 Selenicereus undatus HOM05D004964 ORTHO05D005918 1.6e-68 264.2 392 43.4
BcaB07g30949 Brassica carinata HOM05D004964 ORTHO05D005918 1.3e-65 254.6 405 41.0
Potri.013G047100 Populus trichocarpa HOM05D004964 ORTHO05D005918 2.2e-65 253.8 313 50.8
HPP92_003061 Vanilla planifolia HOM05D004964 ORTHO05D005918 3.7e-65 253.1 400 40.5
ATR0736G161 Amborella trichopoda HOM05D004964 ORTHO05D005918 9.1e-64 248.4 399 38.8
Hma1.2p1_1512F.1_g287895 Hydrangea macrophylla HOM05D004964 ORTHO05D005918 9.1e-64 248.4 261 56.7
Eucgr.H04227 Eucalyptus grandis HOM05D004964 ORTHO05D005918 8.6e-62 241.9 396 38.9
SalBow6G5984 Salvia bowleyana HOM05D004964 ORTHO05D005918 2.5e-61 240.4 474 37.1
CsaV3_2G009770 Cucumis sativus L. HOM05D004964 ORTHO05D005918 3.3e-61 240.0 324 45.4
COL.COLO4_00075 Corchorus olitorius HOM05D004964 ORTHO05D005918 1.8e-59 234.2 318 49.4
AL1G47570 Arabidopsis lyrata HOM05D004964 ORTHO05D005918 2.6e-58 230.3 409 37.7
SGA_v2.0_scaffold177G39428 Striga asiatica HOM05D004964 ORTHO05D005918 5.7e-58 229.2 411 40.1
MD12G1248000 Malus domestica HOM05D004964 ORTHO05D005918 9.2e-56 221.9 258 48.4
Ah.10g037790 Amaranthus hybridus HOM05D004964 ORTHO05D005918 9.5e-53 211.8 372 38.2
AL1G20660 Arabidopsis lyrata HOM05D004964 ORTHO05D005918 8.0e-52 208.8 370 36.8
QL03p030145 Quercus lobata HOM05D004964 ORTHO05D005918 9.8e-50 201.8 173 56.1
FAN09G0282 Fragaria x ananassa HOM05D004964 ORTHO05D005918 6.4e-49 199.1 249 49.8
Aa31LG1G4780 Aethionema arabicum HOM05D004964 ORTHO05D005918 7.8e-47 192.2 276 44.6
CARHR222860 Cardamine hirsuta HOM05D004964 ORTHO05D005918 1.1e-43 181.8 217 45.2
Zm00001eb229480 Zea mays HOM05D004964 ORTHO05D005918 4.1e-40 169.9 319 36.4
AagrBONN_evm.TU.Sc2ySwM_340.245 Anthoceros agrestis HOM05D004964 ORTHO05D005918 1.7e-38 164.5 416 32.9
QL03p030283 Quercus lobata HOM05D004964 ORTHO05D005918 1.7e-38 164.5 125 60.8
QL03p030368 Quercus lobata HOM05D004964 ORTHO05D005918 5.2e-35 152.9 236 44.1
Pp3c7_7610 Physcomitrium patens HOM05D004964 ORTHO05D005918 2.2e-33 147.5 491 26.9
SGA_v2.0_scaffold26G11248 Striga asiatica HOM05D004964 ORTHO05D005918 2.7e-31 140.6 202 42.6
QL03p030280 Quercus lobata HOM05D004964 ORTHO05D005918 7.8e-31 139.0 221 43.0
CDE04G2937 Ceratophyllum demersum HOM05D004964 ORTHO05D005918 1.0e-30 138.7 178 48.9
ClCG11G010620 Citrullus lanatus HOM05D004964 ORTHO05D005918 5.1e-30 136.3 171 45.0
Pp3c11_21460 Physcomitrium patens HOM05D004964 ORTHO05D005918 6.6e-30 136.0 412 28.9
MD12G1248600 Malus domestica HOM05D004964 ORTHO05D005918 1.1e-29 135.2 161 52.2
QL03p030376 Quercus lobata HOM05D004964 ORTHO05D005918 2.5e-29 134.0 150 44.0
Os01g0684800 Oryza sativa ssp. japonica HOM05D004964 ORTHO05D005918 5.6e-29 132.9 232 37.1
C07p27190 Brassica napus HOM05D004964 ORTHO05D005918 3.6e-28 130.2 251 39.0
BolC7t43246H Brassica oleracea HOM05D004964 ORTHO05D005918 3.6e-28 130.2 251 39.0
BcaC04g21837 Brassica carinata HOM05D004964 ORTHO05D005918 2.4e-27 127.5 269 35.3
Mapoly0082s0051 Marchantia polymorpha HOM05D004964 ORTHO05D005918 5.2e-27 126.3 495 26.3
Haze_04423 Corylus avellana HOM05D004964 ORTHO05D005918 3.8e-25 120.2 139 45.3
Aa31LG1G4790 Aethionema arabicum HOM05D004964 ORTHO05D005918 8.4e-25 119.0 127 46.5
Haze_04422 Corylus avellana HOM05D004964 ORTHO05D005918 1.2e-23 115.2 179 43.0
TPR.G19618 Trifolium pratense HOM05D004964 ORTHO05D005918 1.6e-23 114.8 95 55.8
SMO146G0189 Selaginella moellendorffii HOM05D004964 ORTHO05D005918 1.1e-21 108.6 397 29.2
C09p26820 Brassica napus HOM05D004964 ORTHO05D005918 1.9e-21 107.8 275 32.0
SHI23132 Sapria himalayana HOM05D000024 ORTHO05D000007 4.4e-18 96.7 144 38.2
TPR.G15846 Trifolium pratense HOM05D004964 ORTHO05D005918 4.4e-18 96.7 194 36.1
Hund12147 Selenicereus undatus HOM05D004964 ORTHO05D005918 3.8e-17 93.6 169 40.2
Lsat_1_v5_gn_6_73440 Lactuca sativa HOM05D001771 ORTHO05D001876 4.9e-17 93.2 144 42.4
BolC9t55571H Brassica oleracea HOM05D004964 ORTHO05D005918 9.3e-16 89.0 160 35.6
BolC9t55572H Brassica oleracea HOM05D004964 ORTHO05D005918 2.7e-15 87.4 125 44.8
SEGI_14565 Sequoiadendron giganteum HOM05D004964 ORTHO05D005918 3.0e-14 84.0 164 36.0
CDE04G0768 Ceratophyllum demersum HOM05D004964 ORTHO05D005918 3.9e-14 83.6 130 36.9
CBR_g718 Chara braunii HOM05D004964 ORTHO05D005918 5.6e-13 79.7 331 26.0
Psat7g249360 Pisum sativum HOM05D001947 ORTHO05D021361 1.4e-11 75.1 96 46.9
arahy.Tifrunner.gnm1.ann1.A28SEL Arachis hypogaea HOM05D000231 ORTHO05D005918 3.8e-09 67.0 89 46.1
SEGI_33500 Sequoiadendron giganteum HOM05D004964 ORTHO05D005918 2.4e-08 64.3 102 41.2
Lsat_1_v5_gn_6_39820 Lactuca sativa HOM05D004964 ORTHO05D005918 3.2e-08 63.9 74 51.4
Oeu012237.1 Olea europaea HOM05D004964 ORTHO05D005918 2.1e-07 61.2 68 44.1
MD12G1248100 Malus domestica HOM05D004964 ORTHO05D005918 3.0e-06 57.4 78 46.2


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