Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038325 Camellia sinensis var. sinensis HOM05D000067 ORTHO05D000097 2.7e-39 164.9 82 100.0
CSS0031462 Camellia sinensis var. sinensis HOM05D000067 ORTHO05D000097 1.1e-19 99.8 108 53.7
CSS0023999 Camellia sinensis var. sinensis HOM05D000067 ORTHO05D000097 1.2e-18 96.3 91 59.3
CSS0019833 Camellia sinensis var. sinensis HOM05D000067 ORTHO05D000097 3.4e-18 94.7 49 91.8
CSS0012478 Camellia sinensis var. sinensis HOM05D000067 ORTHO05D000097 4.5e-18 94.4 49 91.8
CSS0019518 Camellia sinensis var. sinensis HOM05D000067 ORTHO05D000097 4.5e-18 94.4 93 58.1
CSS0030879 Camellia sinensis var. sinensis HOM05D000067 ORTHO05D000097 5.8e-18 94.0 49 89.8
CSS0021864 Camellia sinensis var. sinensis HOM05D000067 ORTHO05D000097 4.9e-17 90.9 91 57.1
CSS0002552 Camellia sinensis var. sinensis HOM05D000067 ORTHO05D000097 2.5e-16 88.6 49 79.6
CSS0006343 Camellia sinensis var. sinensis HOM05D000067 ORTHO05D000097 2.5e-16 88.6 95 56.8
CSS0014869 Camellia sinensis var. sinensis HOM05D000067 ORTHO05D000097 4.2e-16 87.8 49 81.6
CSS0040182 Camellia sinensis var. sinensis HOM05D000067 ORTHO05D000097 5.1e-14 80.9 41 87.8
Dinv22324 Davidia involucrata HOM05D000067 ORTHO05D000097 4.5e-10 67.8 47 68.1
vmacro11786 Vaccinium macrocarpon HOM05D000067 ORTHO05D000097 1.3e-09 66.2 71 50.7
Dinv03963 Davidia involucrata HOM05D000067 ORTHO05D000097 2.2e-09 65.5 51 68.6
Actinidia09944 Actinidia chinensis HOM05D000067 ORTHO05D000097 6.5e-09 63.9 49 65.3
RcHm_v2.0_Chr6g0265741 Rosa chinensis HOM05D000067 ORTHO05D000097 1.1e-08 63.2 51 64.7
vmacro11782 Vaccinium macrocarpon HOM05D000067 ORTHO05D000097 1.1e-08 63.2 51 58.8
vmacro11784 Vaccinium macrocarpon HOM05D000067 ORTHO05D000097 1.1e-08 63.2 49 61.2
vmacro11785 Vaccinium macrocarpon HOM05D000067 ORTHO05D000097 1.1e-08 63.2 49 61.2
vmacro23025 Vaccinium macrocarpon HOM05D000067 ORTHO05D000097 1.1e-08 63.2 51 58.8
vmacro23026 Vaccinium macrocarpon HOM05D000067 ORTHO05D000097 1.1e-08 63.2 49 61.2
vmacro23065 Vaccinium macrocarpon HOM05D000067 ORTHO05D000097 1.1e-08 63.2 51 58.8
Actinidia09945 Actinidia chinensis HOM05D000067 ORTHO05D000097 1.9e-08 62.4 55 61.8
Actinidia09946 Actinidia chinensis HOM05D000067 ORTHO05D000097 1.9e-08 62.4 55 60.0
Actinidia34640 Actinidia chinensis HOM05D000067 ORTHO05D000097 1.9e-08 62.4 55 60.0
Dinv20588 Davidia involucrata HOM05D000067 ORTHO05D000097 2.5e-08 62.0 54 61.1
GSVIVG01036312001 Vitis vinifera HOM05D000067 ORTHO05D000097 2.5e-08 62.0 49 63.3
Oeu053381.1 Olea europaea HOM05D000067 ORTHO05D000097 3.2e-08 61.6 47 63.8
RcHm_v2.0_Chr5g0044191 Rosa chinensis HOM05D000067 ORTHO05D000097 3.2e-08 61.6 49 61.2
CSS0004338 Camellia sinensis var. sinensis HOM05D000067 ORTHO05D000097 7.1e-08 60.5 49 59.2
Eucgr.C02554 Eucalyptus grandis HOM05D000067 ORTHO05D000097 9.3e-08 60.1 67 46.3
QL08p020155 Quercus lobata HOM05D000067 ORTHO05D000097 1.2e-07 59.7 67 50.7
QL08p020180 Quercus lobata HOM05D000067 ORTHO05D000097 1.2e-07 59.7 67 50.7
GSVIVG01036308001 Vitis vinifera HOM05D000067 ORTHO05D000097 1.2e-07 59.7 49 61.2
Dinv21878 Davidia involucrata HOM05D000067 ORTHO05D000097 1.6e-07 59.3 51 62.7
Eucgr.C02474 Eucalyptus grandis HOM05D000067 ORTHO05D000097 1.6e-07 59.3 49 57.1
QL08p014299 Quercus lobata HOM05D000067 ORTHO05D000097 1.6e-07 59.3 60 51.7
vmacro11783 Vaccinium macrocarpon HOM05D000067 ORTHO05D000097 1.6e-07 59.3 51 54.9
GSVIVG01036366001 Vitis vinifera HOM05D000067 ORTHO05D000097 1.6e-07 59.3 49 61.2
GSVIVG01036346001 Vitis vinifera HOM05D000067 ORTHO05D000097 2.1e-07 58.9 74 48.6
FAN02G1883 Fragaria x ananassa HOM05D000067 ORTHO05D000097 2.7e-07 58.5 49 59.2
Hma1.2p1_0752F.1_g212820 Hydrangea macrophylla HOM05D000067 ORTHO05D000097 2.7e-07 58.5 60 53.3
Oeu053385.1 Olea europaea HOM05D000067 ORTHO05D000097 2.7e-07 58.5 47 57.4
QL08p014097 Quercus lobata HOM05D000067 ORTHO05D000097 2.7e-07 58.5 49 57.1
Eucgr.J01453 Eucalyptus grandis HOM05D000067 ORTHO05D000097 4.6e-07 57.8 50 58.0
RcHm_v2.0_Chr6g0305391 Rosa chinensis HOM05D000067 ORTHO05D000097 4.6e-07 57.8 49 59.2
Dinv11141 Davidia involucrata HOM05D000067 ORTHO05D000097 6.1e-07 57.4 53 60.4
FAN05G0866 Fragaria x ananassa HOM05D000067 ORTHO05D000097 6.1e-07 57.4 49 59.2
FAN24G3239 Fragaria x ananassa HOM05D000067 ORTHO05D000097 6.1e-07 57.4 49 59.2
GSVIVG01036374001 Vitis vinifera HOM05D000067 ORTHO05D000097 6.1e-07 57.4 65 50.8
GSVIVG01036376001 Vitis vinifera HOM05D000067 ORTHO05D000097 6.1e-07 57.4 49 57.1
FAN05G4569 Fragaria x ananassa HOM05D000067 ORTHO05D000097 7.9e-07 57.0 49 59.2
Prupe.4G198700 Prunus persica HOM05D000067 ORTHO05D000097 7.9e-07 57.0 49 53.1
QL05p077082 Quercus lobata HOM05D000067 ORTHO05D000097 1.0e-06 56.6 60 50.0
QL93p0073_1173 Quercus lobata HOM05D000067 ORTHO05D000097 1.0e-06 56.6 60 50.0
TAR624G0024 Trochodendron aralioides HOM05D000067 ORTHO05D000097 1.0e-06 56.6 62 51.6
TAR624G1254 Trochodendron aralioides HOM05D000067 ORTHO05D000097 1.0e-06 56.6 49 59.2
CiPaw.01G051400 Carya illinoinensis HOM05D000067 ORTHO05D000097 1.3e-06 56.2 49 57.1
FAN07G0028 Fragaria x ananassa HOM05D000067 ORTHO05D000097 1.3e-06 56.2 49 53.1
Prupe.4G199500 Prunus persica HOM05D000067 ORTHO05D000097 1.3e-06 56.2 49 53.1
GSVIVG01036315001 Vitis vinifera HOM05D000067 ORTHO05D000097 1.3e-06 56.2 49 59.2
FvH4_1g05400 Fragaria vesca HOM05D000067 ORTHO05D000097 1.8e-06 55.8 49 57.1
FvH4_4g27790 Fragaria vesca HOM05D000067 ORTHO05D000097 1.8e-06 55.8 49 55.1
FAN14G4895 Fragaria x ananassa HOM05D000067 ORTHO05D000097 1.8e-06 55.8 49 59.2
FAN19G0433 Fragaria x ananassa HOM05D000067 ORTHO05D000097 1.8e-06 55.8 49 57.1
Prupe.4G199000 Prunus persica HOM05D000067 ORTHO05D000097 1.8e-06 55.8 49 53.1
TAR624G0394 Trochodendron aralioides HOM05D000067 ORTHO05D000097 1.8e-06 55.8 59 52.5
Eucgr.C04198 Eucalyptus grandis HOM05D000067 ORTHO05D000097 2.3e-06 55.5 49 51.0
FvH4_6g11440 Fragaria vesca HOM05D000067 ORTHO05D000097 2.3e-06 55.5 49 53.1
FAN14G2132 Fragaria x ananassa HOM05D000067 ORTHO05D000097 2.3e-06 55.5 49 53.1
QL08p009665 Quercus lobata HOM05D000067 ORTHO05D000097 2.3e-06 55.5 49 57.1
Cfa020443 Carpinus fangiana HOM05D000067 ORTHO05D000097 3.0e-06 55.1 53 54.7
FvH4_6g06540 Fragaria vesca HOM05D000067 ORTHO05D000097 3.0e-06 55.1 49 57.1
QL08p014204 Quercus lobata HOM05D000067 ORTHO05D000097 3.0e-06 55.1 49 55.1
RcHm_v2.0_Chr7g0227831 Rosa chinensis HOM05D000067 ORTHO05D000097 3.0e-06 55.1 61 44.3
TAR626G0067 Trochodendron aralioides HOM05D000067 ORTHO05D000097 3.0e-06 55.1 49 53.1
VMungo1127G1397 Vigna mungo HOM05D000067 ORTHO05D000097 3.0e-06 55.1 50 60.0
GSVIVG01036352001 Vitis vinifera HOM05D000067 ORTHO05D000097 3.0e-06 55.1 49 57.1
ClCG10G006250 Citrullus lanatus HOM05D000067 ORTHO05D000097 3.9e-06 54.7 49 57.1
ClCG10G006260 Citrullus lanatus HOM05D000067 ORTHO05D000097 3.9e-06 54.7 49 57.1
FvH4_4g27943 Fragaria vesca HOM05D000067 ORTHO05D000097 3.9e-06 54.7 56 50.0
FAN25G2022 Fragaria x ananassa HOM05D000067 ORTHO05D000097 3.9e-06 54.7 56 50.0
QL11p016651 Quercus lobata HOM05D000067 ORTHO05D000097 3.9e-06 54.7 54 51.9
QL11p017294 Quercus lobata HOM05D000067 ORTHO05D000097 3.9e-06 54.7 54 53.7
TAR624G1017 Trochodendron aralioides HOM05D000067 ORTHO05D000097 3.9e-06 54.7 62 50.0
GSVIVG01036344001 Vitis vinifera HOM05D000067 ORTHO05D000097 3.9e-06 54.7 49 57.1
GSVIVG01036371001 Vitis vinifera HOM05D000067 ORTHO05D000097 3.9e-06 54.7 49 57.1
Ah.13g069990 Amaranthus hybridus HOM05D000067 ORTHO05D000097 5.1e-06 54.3 49 51.0
CiPaw.15G083100 Carya illinoinensis HOM05D000067 ORTHO05D000097 5.1e-06 54.3 51 54.9
Ca_28399_v3 Cicer arietinum L. HOM05D000067 ORTHO05D000097 5.1e-06 54.3 48 54.2
FAN15G0397 Fragaria x ananassa HOM05D000067 ORTHO05D000097 5.1e-06 54.3 49 57.1
FAN15G1630 Fragaria x ananassa HOM05D000067 ORTHO05D000097 5.1e-06 54.3 49 57.1
FAN22G1761 Fragaria x ananassa HOM05D000067 ORTHO05D000097 5.1e-06 54.3 49 51.0
Prupe.4G198500 Prunus persica HOM05D000067 ORTHO05D000097 5.1e-06 54.3 49 51.0
GSVIVG01036330001 Vitis vinifera HOM05D000067 ORTHO05D000097 5.1e-06 54.3 49 59.2
Atru.chr12.1446 Acer truncatum HOM05D000067 ORTHO05D000097 6.7e-06 53.9 49 55.1
Cpa.g.c33276.1 Carica papaya HOM05D000067 ORTHO05D000097 6.7e-06 53.9 50 60.0
Cpa.g.sc417.2 Carica papaya HOM05D000067 ORTHO05D000097 6.7e-06 53.9 50 54.0
CsaV3_3G005780 Cucumis sativus L. HOM05D000067 ORTHO05D000097 6.7e-06 53.9 53 56.6
Eucgr.F03412 Eucalyptus grandis HOM05D000067 ORTHO05D000097 6.7e-06 53.9 49 53.1
FAN14G1041 Fragaria x ananassa HOM05D000067 ORTHO05D000097 6.7e-06 53.9 49 51.0
PGR031G0805 Punica granatum HOM05D000067 ORTHO05D000097 6.7e-06 53.9 64 43.8
QL08p019147 Quercus lobata HOM05D000067 ORTHO05D000097 6.7e-06 53.9 49 57.1
Cpa.g.sc585.3 Carica papaya HOM05D000067 ORTHO05D000097 8.7e-06 53.5 49 55.1
Cc02_g29500 Coffea canephora HOM05D000067 ORTHO05D000097 8.7e-06 53.5 48 58.3
Eucgr.L02618 Eucalyptus grandis HOM05D000067 ORTHO05D000097 8.7e-06 53.5 49 51.0
FvH4_4g27941 Fragaria vesca HOM05D000067 ORTHO05D000097 8.7e-06 53.5 49 51.0
FvH4_4g27952 Fragaria vesca HOM05D000067 ORTHO05D000097 8.7e-06 53.5 49 51.0
TPR.G31649 Trifolium pratense HOM05D000067 ORTHO05D000097 8.7e-06 53.5 48 56.2
VMungo1127G1885 Vigna mungo HOM05D000067 ORTHO05D000097 8.7e-06 53.5 50 58.0
GSVIVG01036361001 Vitis vinifera HOM05D000067 ORTHO05D000097 8.7e-06 53.5 49 57.1


User provided reference genes

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