Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038322 Camellia sinensis var. sinensis HOM05D049806 ORTHO05D026363 3.1e-50 201.4 99 100.0
Dinv38493 Davidia involucrata HOM05D001333 ORTHO05D001208 1.1e-15 86.7 58 75.9
Hma1.2p1_0046F.1_g027480 Hydrangea macrophylla HOM05D001333 ORTHO05D001208 9.5e-15 83.6 59 71.2
Prupe.5G161100 Prunus persica HOM05D001333 ORTHO05D001208 9.5e-15 83.6 99 52.5
GSVIVG01007583001 Vitis vinifera HOM05D001333 ORTHO05D001208 1.2e-14 83.2 60 73.3
Actinidia36769 Actinidia chinensis HOM05D001333 ORTHO05D001208 1.6e-14 82.8 56 76.8
Duzib068G0640 Durio zibethinus HOM05D001333 ORTHO05D001208 1.6e-14 82.8 101 50.5
TAR374G1354 Trochodendron aralioides HOM05D001333 ORTHO05D001208 1.6e-14 82.8 99 49.5
Cc04_g10750 Coffea canephora HOM05D001333 ORTHO05D001208 2.8e-14 82.0 59 71.2
Rhsim08G0182200 Rhododendron simsii HOM05D001333 ORTHO05D001208 1.1e-13 80.1 62 72.6
Lj9A472T90 Lonicera japonica HOM05D001333 ORTHO05D001208 1.4e-13 79.7 100 51.0
CSS0005539 Camellia sinensis var. sinensis HOM05D049806 ORTHO05D026363 2.3e-13 79.0 92 53.3
TWI39G0224 Tripterygium wilfordii HOM05D001333 ORTHO05D001208 3.1e-13 78.6 59 72.9
Haze_07646 Corylus avellana HOM05D001333 ORTHO05D001208 5.2e-13 77.8 111 45.0
Cfa019268 Carpinus fangiana HOM05D001333 ORTHO05D001208 8.9e-13 77.0 98 50.0
Glyma.17G126400 Glycine max HOM05D001333 ORTHO05D001208 1.2e-12 76.6 99 44.4
FAN18G1961 Fragaria x ananassa HOM05D001333 ORTHO05D001208 1.5e-12 76.3 101 50.5
MD06G1161300 Malus domestica HOM05D001333 ORTHO05D001208 1.5e-12 76.3 106 48.1
RcHm_v2.0_Chr7g0191831 Rosa chinensis HOM05D001333 ORTHO05D001208 1.5e-12 76.3 103 51.5
vmacro19260 Vaccinium macrocarpon HOM05D001333 ORTHO05D001208 1.5e-12 76.3 63 66.7
VMungo1215G3438 Vigna mungo HOM05D001333 ORTHO05D001208 2.0e-12 75.9 58 60.3
Actinidia19370 Actinidia chinensis HOM05D001333 ORTHO05D026363 2.6e-12 75.5 59 72.9
Manes.14G056500 Manihot esculenta HOM05D001333 ORTHO05D001208 3.4e-12 75.1 99 45.5
COL.COLO4_05699 Corchorus olitorius HOM05D001333 ORTHO05D001208 4.4e-12 74.7 59 69.5
CiPaw.11G013800 Carya illinoinensis HOM05D001333 ORTHO05D001208 9.9e-12 73.6 118 41.5
Thecc.03G119700 Theobroma cacao HOM05D001333 ORTHO05D001208 9.9e-12 73.6 57 64.9
Duzib205G0478 Durio zibethinus HOM05D001333 ORTHO05D001208 1.3e-11 73.2 58 67.2
MD14G1167000 Malus domestica HOM05D001333 ORTHO05D001208 1.7e-11 72.8 103 49.5
Medtr4g104140 Medicago truncatula HOM05D001333 ORTHO05D001208 2.2e-11 72.4 97 43.3
Sopen06g028110 Solanum pennellii HOM05D001333 ORTHO05D001208 2.9e-11 72.0 58 65.5
Potri.015G087700 Populus trichocarpa HOM05D001333 ORTHO05D001208 3.7e-11 71.6 99 46.5
Solyc06g071820.3 Solanum lycopersicum HOM05D001333 ORTHO05D001208 3.7e-11 71.6 58 65.5
Actinidia11918 Actinidia chinensis HOM05D001333 ORTHO05D001208 4.9e-11 71.2 56 71.4
Ciclev10020762m.g Citrus clementina HOM05D001333 ORTHO05D001208 4.9e-11 71.2 99 47.5
Phvul.003G207300 Phaseolus vulgaris HOM05D001333 ORTHO05D001208 6.4e-11 70.9 58 58.6
arahy.Tifrunner.gnm1.ann1.D773D7 Arachis hypogaea HOM05D001333 ORTHO05D001208 8.3e-11 70.5 58 55.2
Ca_19436_v3 Cicer arietinum L. HOM05D001333 ORTHO05D001208 1.1e-10 70.1 56 60.7
Sabra12G0066000 Salix brachista HOM05D001333 ORTHO05D001208 1.1e-10 70.1 99 44.4
TPR.G37518 Trifolium pratense HOM05D001333 ORTHO05D001208 1.1e-10 70.1 56 60.7
Sabra15G0110900 Salix brachista HOM05D001333 ORTHO05D001208 1.4e-10 69.7 99 47.5
Nitab4.5_0004177g0020 Nicotiana tabacum HOM05D001333 ORTHO05D001208 2.4e-10 68.9 56 62.5
CANSAT80G2541 Cannabis sativa HOM05D001333 ORTHO05D001208 3.2e-10 68.6 99 46.5
Gohir.D07G058900 Gossypium hirsutum HOM05D001333 ORTHO05D001208 4.1e-10 68.2 61 60.7
Gorai.001G062300 Gossypium raimondii HOM05D001333 ORTHO05D001208 4.1e-10 68.2 61 60.7
Nitab4.5_0000003g0900 Nicotiana tabacum HOM05D001333 ORTHO05D001208 5.4e-10 67.8 56 62.5
SalBow5G2476 Salvia bowleyana HOM05D001333 ORTHO05D001208 5.4e-10 67.8 113 38.9
PGSC0003DMG402026984 Solanum tuberosum HOM05D001333 ORTHO05D001208 5.4e-10 67.8 58 63.8
Oeu063278.2 Olea europaea HOM05D001333 ORTHO05D001208 7.1e-10 67.4 59 57.6
Lalb_Chr11g0069801 Lupinus albus HOM05D001333 ORTHO05D001208 9.2e-10 67.0 58 56.9
Nitab4.5_0013589g0010 Nicotiana tabacum HOM05D001333 ORTHO05D001208 9.2e-10 67.0 59 62.7
Glyma.05G043800 Glycine max HOM05D001333 ORTHO05D026363 1.2e-09 66.6 52 61.5
Duzib084G0568 Durio zibethinus HOM05D001333 ORTHO05D001208 1.6e-09 66.2 57 64.9
CAN.G993.14 Capsicum annuum HOM05D001333 ORTHO05D001208 2.7e-09 65.5 97 46.4
CAN.G993.15 Capsicum annuum HOM05D001333 ORTHO05D001208 3.5e-09 65.1 58 58.6
Potri.012G091400 Populus trichocarpa HOM05D001333 ORTHO05D001208 3.5e-09 65.1 57 57.9
Nitab4.5_0007909g0010 Nicotiana tabacum HOM05D001333 ORTHO05D001208 4.6e-09 64.7 89 47.2
Gohir.A07G054500 Gossypium hirsutum HOM05D001333 ORTHO05D001208 6.0e-09 64.3 54 63.0
Lalb_Chr12g0202031 Lupinus albus HOM05D001333 ORTHO05D001208 6.0e-09 64.3 58 53.4
Atru.chr9.970 Acer truncatum HOM05D001333 ORTHO05D001208 7.8e-09 63.9 59 61.0
Sopen03g030830 Solanum pennellii HOM05D001333 ORTHO05D001208 7.8e-09 63.9 94 42.6
Solyc03g111710.3 Solanum lycopersicum HOM05D001333 ORTHO05D001208 1.0e-08 63.5 94 42.6
PGSC0003DMG400015229 Solanum tuberosum HOM05D001333 ORTHO05D001208 1.0e-08 63.5 94 42.6
Nitab4.5_0001812g0040 Nicotiana tabacum HOM05D001333 ORTHO05D001208 1.7e-08 62.8 89 46.1
Nitab4.5_0001812g0080 Nicotiana tabacum HOM05D001333 ORTHO05D001208 1.7e-08 62.8 89 46.1
TAR622G1023 Trochodendron aralioides HOM05D001333 ORTHO05D001208 1.7e-08 62.8 44 75.0
CAN.G472.54 Capsicum annuum HOM05D001333 ORTHO05D001208 2.3e-08 62.4 94 42.6
Eucgr.K02768 Eucalyptus grandis HOM05D001333 ORTHO05D001208 2.3e-08 62.4 58 51.7
Peaxi162Scf00763g00043 Petunia axillaris HOM05D001333 ORTHO05D001208 2.3e-08 62.4 54 61.1
DCAR_021599 Daucus carota HOM05D001333 ORTHO05D001208 3.0e-08 62.0 93 44.1
Migut.O00217 Erythranthe guttata HOM05D001333 ORTHO05D001208 3.0e-08 62.0 107 42.1
Gorai.008G204000 Gossypium raimondii HOM05D001333 ORTHO05D001208 3.0e-08 62.0 53 60.4
Nn3g16629 Nelumbo nucifera HOM05D001333 ORTHO05D001208 3.0e-08 62.0 86 47.7
Peaxi162Scf00089g01020 Petunia axillaris HOM05D001333 ORTHO05D001208 3.0e-08 62.0 106 40.6
Gohir.D12G190201 Gossypium hirsutum HOM05D001333 ORTHO05D001208 5.1e-08 61.2 60 58.3
vmacro16693 Vaccinium macrocarpon HOM05D001333 ORTHO05D001208 5.1e-08 61.2 43 76.7
Gohir.A12G187200 Gossypium hirsutum HOM05D001333 ORTHO05D001208 6.6e-08 60.8 60 58.3
Lj4g0025790 Lotus japonicus HOM05D001333 ORTHO05D001208 6.6e-08 60.8 58 51.7
Oeu053493.1 Olea europaea HOM05D001333 ORTHO05D001208 8.6e-08 60.5 51 56.9
Sopen06g028120 Solanum pennellii HOM05D001333 ORTHO05D001208 8.6e-08 60.5 95 43.2
ATR0824G123 Amborella trichopoda HOM05D001333 ORTHO05D001208 1.1e-07 60.1 44 75.0
AUR62001253 Chenopodium quinoa HOM05D001333 ORTHO05D001208 1.5e-07 59.7 97 44.3
AUR62025755 Chenopodium quinoa HOM05D001333 ORTHO05D001208 1.5e-07 59.7 97 44.3
Manes.06G113100 Manihot esculenta HOM05D001333 ORTHO05D001208 1.5e-07 59.7 78 48.7
Sc04g0001160 Simmondsia chinensis HOM05D001333 ORTHO05D001208 1.5e-07 59.7 99 41.4
PGR044G2746 Punica granatum HOM05D001333 ORTHO05D001208 2.5e-07 58.9 102 40.2
MSTRG.23185 Avicennia marina HOM05D001333 ORTHO05D001208 3.3e-07 58.5 59 54.2
Solyc06g071830.2 Solanum lycopersicum HOM05D001333 ORTHO05D001208 3.3e-07 58.5 95 43.2
Glyma.04G190900 Glycine max HOM05D001333 ORTHO05D001208 4.3e-07 58.2 80 45.0
PGR083G1457 Punica granatum HOM05D001333 ORTHO05D001208 5.6e-07 57.8 61 54.1
EL10Ac7g18039 Beta vulgaris HOM05D001333 ORTHO05D001208 7.3e-07 57.4 77 49.4
PGSC0003DMG401026984 Solanum tuberosum HOM05D001333 ORTHO05D001208 7.3e-07 57.4 55 58.2
DCAR_026199 Daucus carota HOM05D001333 ORTHO05D001208 9.5e-07 57.0 60 56.7
MELO3C002318.2 Cucumis melo HOM05D001333 ORTHO05D001208 1.6e-06 56.2 98 38.8
CsaV3_1G005240 Cucumis sativus L. HOM05D001333 ORTHO05D001208 1.6e-06 56.2 100 41.0
Lsat_1_v5_gn_1_28741 Lactuca sativa HOM05D001333 ORTHO05D001208 1.6e-06 56.2 44 65.9
PSO566G0047 Papaver somniferum HOM05D001333 ORTHO05D001208 1.6e-06 56.2 58 53.4
VMungo1309G2448 Vigna mungo HOM05D001333 ORTHO05D001208 2.1e-06 55.8 45 62.2
MSTRG.11515 Avicennia marina HOM05D001333 ORTHO05D001208 3.6e-06 55.1 46 60.9
ClCG03G003310 Citrullus lanatus HOM05D001333 ORTHO05D001208 3.6e-06 55.1 97 38.1
Nn4g22518 Nelumbo nucifera HOM05D001333 ORTHO05D001208 3.6e-06 55.1 41 65.9
SGA_v2.0_scaffold90G27786 Striga asiatica HOM05D001333 ORTHO05D001208 3.6e-06 55.1 45 57.8
Phvul.009G170600 Phaseolus vulgaris HOM05D001333 ORTHO05D001208 4.7e-06 54.7 45 60.0
ClCG04G012460 Citrullus lanatus HOM05D001333 ORTHO05D001208 6.2e-06 54.3 101 38.6
MBI10_g03803_MAGBIO Magnolia biondii HOM05D001333 ORTHO05D001208 6.2e-06 54.3 83 48.2
Aqoxy5G03636 Aquilegia oxysepala HOM05D001333 ORTHO05D001208 8.1e-06 53.9 80 43.8
CsaV3_1G009120 Cucumis sativus L. HOM05D001333 ORTHO05D001208 8.1e-06 53.9 99 37.4
Lalb_Chr07g0183171 Lupinus albus HOM05D001333 ORTHO05D001208 8.1e-06 53.9 41 61.0


User provided reference genes

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