Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038314 Camellia sinensis var. sinensis HOM05D030635 ORTHO05D009248 6.3e-91 337.4 171 100.0
Hma1.2p1_0315F.1_g122670 Hydrangea macrophylla HOM05D000156 ORTHO05D009248 5.3e-13 78.6 86 57.0
Dinv40152 Davidia involucrata HOM05D000156 ORTHO05D009248 1.5e-12 77.0 86 57.0
QL06p052304 Quercus lobata HOM05D030635 ORTHO05D009248 2.0e-12 76.6 152 39.5
Actinidia28737 Actinidia chinensis HOM05D000156 ORTHO05D009248 8.4e-11 71.2 164 38.4
Lj4A227T49 Lonicera japonica HOM05D000156 ORTHO05D009248 5.5e-10 68.6 91 46.2
Rhsim08G0029900 Rhododendron simsii HOM05D000156 ORTHO05D009248 9.3e-10 67.8 94 44.7
Nitab4.5_0001696g0130 Nicotiana tabacum HOM05D000156 ORTHO05D009248 2.7e-09 66.2 79 55.7
Nitab4.5_0007439g0010 Nicotiana tabacum HOM05D000156 ORTHO05D009248 2.7e-09 66.2 79 55.7
PGSC0003DMG400003665 Solanum tuberosum HOM05D000156 ORTHO05D009248 3.0e-08 62.8 79 49.4
FAN26G2339 Fragaria x ananassa HOM05D000156 ORTHO05D009248 5.1e-08 62.0 161 33.5
Cc07_g11420 Coffea canephora HOM05D000156 ORTHO05D009248 8.7e-08 61.2 79 45.6
Peaxi162Scf00300g00014 Petunia axillaris HOM05D000156 ORTHO05D009248 8.7e-08 61.2 79 48.1
Sopen02g028080 Solanum pennellii HOM05D000156 ORTHO05D009248 4.3e-07 58.9 79 46.8
CAN.G890.21 Capsicum annuum HOM05D000156 ORTHO05D009248 4.8e-06 55.5 79 41.8
FAN23G0345 Fragaria x ananassa HOM05D000156 ORTHO05D009248 6.3e-06 55.1 84 45.2
Gohir.A02G175100 Gossypium hirsutum HOM05D000156 ORTHO05D009248 6.3e-06 55.1 83 41.0
Gorai.003G005000 Gossypium raimondii HOM05D000156 ORTHO05D009248 6.3e-06 55.1 83 41.0
GSVIVG01002333001 Vitis vinifera HOM05D000156 ORTHO05D009248 6.3e-06 55.1 93 46.2
Gohir.D03G004700 Gossypium hirsutum HOM05D000156 ORTHO05D009248 8.2e-06 54.7 83 41.0


User provided reference genes

Program Settings