Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038299 Camellia sinensis var. sinensis HOM05D002816 ORTHO05D005633 7.9e-155 550.4 283 100.0
Actinidia16293 Actinidia chinensis HOM05D002816 ORTHO05D005633 2.7e-131 472.2 282 84.0
vmacro22895 Vaccinium macrocarpon HOM05D002816 ORTHO05D005633 1.5e-126 456.4 282 82.6
Potri.003G210600 Populus trichocarpa HOM05D002816 ORTHO05D005633 2.7e-115 419.1 282 73.4
Potri.003G210701 Populus trichocarpa HOM05D002816 ORTHO05D005633 1.4e-114 416.8 282 73.4
Potri.T085701 Populus trichocarpa HOM05D002816 ORTHO05D005633 1.4e-114 416.8 282 73.4
Dinv36301 Davidia involucrata HOM05D002816 ORTHO05D005633 3.3e-113 412.1 282 71.3
CSS0044925 Camellia sinensis var. sinensis HOM05D002816 ORTHO05D005633 4.4e-113 411.8 282 72.0
CSS0023415 Camellia sinensis var. sinensis HOM05D002816 ORTHO05D005633 1.3e-112 410.2 282 71.6
RcHm_v2.0_Chr5g0078141 Rosa chinensis HOM05D002816 ORTHO05D005633 1.3e-112 410.2 282 70.6
GSVIVG01025332001 Vitis vinifera HOM05D002816 ORTHO05D005633 1.3e-112 410.2 282 71.6
FvH4_3g43570 Fragaria vesca HOM05D002816 ORTHO05D005633 8.2e-112 407.5 282 70.2
FAN11G3609 Fragaria x ananassa HOM05D002816 ORTHO05D005633 8.2e-112 407.5 282 70.2
FAN25G1910 Fragaria x ananassa HOM05D002816 ORTHO05D005633 8.2e-112 407.5 282 70.2
Manes.14G014200 Manihot esculenta HOM05D002816 ORTHO05D005633 1.4e-111 406.8 282 70.6
QL01p006152 Quercus lobata HOM05D002816 ORTHO05D005633 1.8e-111 406.4 282 69.1
CiPaw.13G165300 Carya illinoinensis HOM05D002816 ORTHO05D005633 2.4e-111 406.0 282 70.2
FAN16G1696 Fragaria x ananassa HOM05D002816 ORTHO05D005633 2.4e-111 406.0 282 69.9
FAN21G1421 Fragaria x ananassa HOM05D002816 ORTHO05D005633 2.4e-111 406.0 282 69.5
MD03G1020900 Malus domestica HOM05D002816 ORTHO05D005633 2.6e-110 402.5 282 69.1
Hma1.2p1_2304F.1_g319340 Hydrangea macrophylla HOM05D002816 ORTHO05D005633 1.7e-109 399.8 283 70.0
Cfa009698 Carpinus fangiana HOM05D002816 ORTHO05D005633 3.8e-109 398.7 282 69.9
Cpa.g.sc84.106 Carica papaya HOM05D002816 ORTHO05D005633 5.0e-109 398.3 282 69.1
Prupe.6G018300 Prunus persica HOM05D002816 ORTHO05D005633 6.5e-109 397.9 282 68.8
Haze_23048 Corylus avellana HOM05D002816 ORTHO05D005633 1.5e-108 396.7 282 69.9
TAR163G0001 Trochodendron aralioides HOM05D002816 ORTHO05D005633 1.5e-108 396.7 282 70.6
Aqoxy1G00177 Aquilegia oxysepala HOM05D002816 ORTHO05D005633 5.5e-108 394.8 282 68.8
TWI75G1088 Tripterygium wilfordii HOM05D002816 ORTHO05D005633 5.5e-108 394.8 281 69.8
Ciclev10017962m.g Citrus clementina HOM05D002816 ORTHO05D005633 1.6e-107 393.3 282 68.1
CSS0006060 Camellia sinensis var. sinensis HOM05D002816 ORTHO05D005633 3.6e-107 392.1 273 71.1
MD11G1022500 Malus domestica HOM05D002816 ORTHO05D005633 1.4e-106 390.2 282 66.7
Oeu014059.1 Olea europaea HOM05D002816 ORTHO05D005633 5.2e-106 388.3 282 67.4
MBI04_g27132_MAGBIO Magnolia biondii HOM05D002816 ORTHO05D005633 8.8e-106 387.5 281 68.0
Duzib168G1434 Durio zibethinus HOM05D002816 ORTHO05D005633 1.5e-105 386.7 282 67.4
Thecc.09G223700 Theobroma cacao HOM05D002816 ORTHO05D005633 1.5e-105 386.7 282 68.1
Gohir.D05G070300 Gossypium hirsutum HOM05D002816 ORTHO05D005633 2.6e-105 386.0 282 68.1
Gorai.009G071300 Gossypium raimondii HOM05D002816 ORTHO05D005633 4.4e-105 385.2 282 68.1
Duzib150G1626 Durio zibethinus HOM05D002816 ORTHO05D005633 7.5e-105 384.4 282 67.4
DCAR_029714 Daucus carota HOM05D002816 ORTHO05D005633 9.7e-105 384.0 282 68.1
Lsat_1_v5_gn_2_101081 Lactuca sativa HOM05D002816 ORTHO05D005633 1.3e-104 383.6 282 69.1
Gohir.A05G067400 Gossypium hirsutum HOM05D002816 ORTHO05D005633 3.7e-104 382.1 282 68.1
Peaxi162Scf00559g00421 Petunia axillaris HOM05D002816 ORTHO05D005633 3.7e-104 382.1 282 69.9
ECA238G3506 Erigeron canadensis HOM05D002816 ORTHO05D005633 4.8e-104 381.7 281 66.5
COL.COLO4_09898 Corchorus olitorius HOM05D002816 ORTHO05D005633 5.3e-103 378.3 282 67.7
Nitab4.5_0009808g0040 Nicotiana tabacum HOM05D002816 ORTHO05D005633 3.5e-102 375.6 282 67.7
CAN.G388.65 Capsicum annuum HOM05D002816 ORTHO05D005633 1.0e-101 374.0 282 67.0
MBI04_g14277_MAGBIO Magnolia biondii HOM05D002816 ORTHO05D005633 1.0e-101 374.0 281 65.5
Nitab4.5_0003796g0070 Nicotiana tabacum HOM05D002816 ORTHO05D005633 1.0e-101 374.0 282 67.7
HanXRQChr07g0196931 Helianthus annuus HOM05D002816 ORTHO05D005633 1.3e-101 373.6 282 66.3
ECA233G2205 Erigeron canadensis HOM05D002816 ORTHO05D005633 3.8e-101 372.1 282 65.2
CAN.G388.66 Capsicum annuum HOM05D002816 ORTHO05D005633 8.5e-101 370.9 283 66.8
CANSAT54G2844 Cannabis sativa HOM05D002816 ORTHO05D005633 2.5e-100 369.4 282 66.3
Migut.D00561 Erythranthe guttata HOM05D002816 ORTHO05D005633 2.5e-100 369.4 285 65.3
DCAR_023760 Daucus carota HOM05D002816 ORTHO05D005633 3.2e-100 369.0 282 65.6
PGR119G0739 Punica granatum HOM05D002816 ORTHO05D005633 1.2e-99 367.1 281 61.9
Sopen01g002590 Solanum pennellii HOM05D002816 ORTHO05D005633 2.1e-99 366.3 283 65.4
VMungo1080G0972 Vigna mungo HOM05D002816 ORTHO05D005633 6.1e-99 364.8 282 64.9
MELO3C014642.2 Cucumis melo HOM05D002816 ORTHO05D005633 1.4e-98 363.6 283 64.7
PGSC0003DMG400021382 Solanum tuberosum HOM05D002816 ORTHO05D005633 1.8e-98 363.2 282 65.6
ClCG02G023650 Citrullus lanatus HOM05D002816 ORTHO05D005633 2.3e-98 362.8 283 64.3
Eucgr.J00810 Eucalyptus grandis HOM05D002816 ORTHO05D005633 3.0e-98 362.5 282 62.1
Lsat_1_v5_gn_6_50161 Lactuca sativa HOM05D002816 ORTHO05D005633 3.0e-98 362.5 282 63.5
HanXRQChr02g0056791 Helianthus annuus HOM05D002816 ORTHO05D005633 4.0e-98 362.1 282 63.5
TPR.G18843 Trifolium pratense HOM05D002816 ORTHO05D005633 4.0e-98 362.1 283 64.7
CsaV3_4G023760 Cucumis sativus L. HOM05D002816 ORTHO05D005633 6.8e-98 361.3 283 64.7
Glyma.13G342600 Glycine max HOM05D002816 ORTHO05D005633 1.5e-97 360.1 282 63.5
PGR119G2184 Punica granatum HOM05D002816 ORTHO05D005633 2.6e-97 359.4 282 60.6
Sopen01g002630 Solanum pennellii HOM05D002816 ORTHO05D005633 2.6e-97 359.4 282 64.9
Solyc01g006640.1 Solanum lycopersicum HOM05D002816 ORTHO05D005633 3.4e-97 359.0 282 64.9
Solyc01g006600.3 Solanum lycopersicum HOM05D002816 ORTHO05D005633 4.4e-97 358.6 282 64.9
Glyma.15G031700 Glycine max HOM05D002816 ORTHO05D005633 9.8e-97 357.5 282 64.2
Eucgr.J00812 Eucalyptus grandis HOM05D002816 ORTHO05D005633 4.8e-96 355.1 282 61.3
Cc01_g04160 Coffea canephora HOM05D002816 ORTHO05D005633 6.3e-96 354.8 282 61.7
Medtr2g098490 Medicago truncatula HOM05D002816 ORTHO05D005633 6.3e-96 354.8 283 63.3
Psat5g289080 Pisum sativum HOM05D002816 ORTHO05D005633 6.3e-96 354.8 283 63.6
arahy.Tifrunner.gnm1.ann1.YK6NC6 Arachis hypogaea HOM05D002816 ORTHO05D005633 1.1e-95 354.0 282 63.8
arahy.Tifrunner.gnm1.ann1.4LCW9K Arachis hypogaea HOM05D002816 ORTHO05D005633 1.4e-95 353.6 282 63.5
Lj3g0016219 Lotus japonicus HOM05D002816 ORTHO05D005633 9.1e-95 350.9 282 62.8
Migut.N02292 Erythranthe guttata HOM05D002816 ORTHO05D005633 1.6e-94 350.1 281 62.6
Sed0025537 Sechium edule HOM05D002816 ORTHO05D005633 3.5e-94 349.0 282 62.4
Lsat_1_v5_gn_6_50280 Lactuca sativa HOM05D002816 ORTHO05D005633 1.5e-92 343.6 281 59.4
SalBow5G4185 Salvia bowleyana HOM05D002816 ORTHO05D005633 3.3e-92 342.4 281 59.4
Atru.chr3.2513 Acer truncatum HOM05D002816 ORTHO05D005633 1.6e-86 323.6 221 71.5
Os04g0473900 Oryza sativa ssp. japonica HOM05D002816 ORTHO05D005633 1.0e-85 320.9 281 59.1
MBI04_g27134_MAGBIO Magnolia biondii HOM05D002816 ORTHO05D005633 2.3e-85 319.7 248 63.3
Eucgr.J00816 Eucalyptus grandis HOM05D002816 ORTHO05D005633 8.6e-85 317.8 282 56.7
arahy.Tifrunner.gnm1.ann1.S74NHW Arachis hypogaea HOM05D002816 ORTHO05D005633 2.1e-83 313.2 267 60.3
Cc01_g04080 Coffea canephora HOM05D002816 ORTHO05D005633 8.0e-83 311.2 282 56.7
Lj3g0024115 Lotus japonicus HOM05D002816 ORTHO05D005633 2.3e-82 309.7 273 58.2
arahy.Tifrunner.gnm1.ann1.D5VX0F Arachis hypogaea HOM05D002816 ORTHO05D005633 8.9e-82 307.8 267 59.2
Glyma.12G054833 Glycine max HOM05D002816 ORTHO05D005633 2.9e-80 302.8 268 59.3
Lju1319A3T41 Lonicera japonica HOM05D002816 ORTHO05D005633 3.2e-79 299.3 225 67.6
Zm00001eb079870 Zea mays HOM05D002816 ORTHO05D005633 4.1e-79 298.9 282 55.3
Lalb_Chr03g0026201 Lupinus albus HOM05D002816 ORTHO05D005633 3.0e-77 292.7 236 63.6
Phvul.011G056700 Phaseolus vulgaris HOM05D002816 ORTHO05D005633 1.9e-76 290.0 258 59.3
Medtr4g066130 Medicago truncatula HOM05D002816 ORTHO05D005633 4.3e-76 288.9 234 63.2
TPR.G13661 Trifolium pratense HOM05D004419 ORTHO05D005633 7.3e-76 288.1 235 63.4
VMungo1127G0859 Vigna mungo HOM05D002816 ORTHO05D005633 7.3e-76 288.1 265 58.9
ATR0605G130 Amborella trichopoda HOM05D002816 ORTHO05D005633 6.2e-75 285.0 289 55.4
Ca_20583_v3 Cicer arietinum L. HOM05D002816 ORTHO05D005633 6.2e-75 285.0 234 62.8
Psat7g213680 Pisum sativum HOM05D002816 ORTHO05D005633 1.8e-74 283.5 236 61.0
Lj1A364T31 Lonicera japonica HOM05D002816 ORTHO05D005633 7.0e-71 271.6 282 54.3
Actinidia06323 Actinidia chinensis HOM05D002816 ORTHO05D005633 1.5e-60 237.3 195 60.5
SEGI_13421 Sequoiadendron giganteum HOM05D002816 ORTHO05D005633 8.9e-58 228.0 311 43.1
SEGI_08878 Sequoiadendron giganteum HOM05D002816 ORTHO05D005633 1.5e-57 227.3 310 43.2
SEGI_27256 Sequoiadendron giganteum HOM05D002816 ORTHO05D005633 1.5e-57 227.3 310 43.2
Actinidia39381 Actinidia chinensis HOM05D002816 ORTHO05D005633 9.6e-52 208.0 131 77.1
ECA233G1587 Erigeron canadensis HOM05D002816 ORTHO05D005633 2.2e-48 196.8 282 42.2
SMO166G0063 Selaginella moellendorffii HOM05D002816 ORTHO05D005633 2.1e-43 180.3 311 37.0
SEGI_08242 Sequoiadendron giganteum HOM05D002816 ORTHO05D005633 3.4e-41 172.9 264 41.3
AagrBONN_evm.TU.Sc2ySwM_344.2597 Anthoceros agrestis HOM05D002816 ORTHO05D005633 6.4e-40 168.7 343 33.8
AagrBONN_evm.TU.Sc2ySwM_344.2583 Anthoceros agrestis HOM05D002816 ORTHO05D005633 4.3e-36 156.0 246 37.0
Psat6g019120 Pisum sativum HOM05D002816 ORTHO05D005633 2.2e-32 143.7 95 71.6
Mapoly0023s0010 Marchantia polymorpha HOM05D002816 ORTHO05D005633 1.6e-27 127.5 240 34.6
SMO115G0335 Selaginella moellendorffii HOM05D002816 ORTHO05D005633 1.3e-21 107.8 131 44.3
CAN.G179.1 Capsicum annuum HOM05D002816 ORTHO05D005633 2.5e-20 103.6 83 62.7
ECA233G1205 Erigeron canadensis HOM05D002816 ORTHO05D005633 3.9e-13 79.7 62 66.1
PSO339G1112 Papaver somniferum HOM05D002816 ORTHO05D005633 1.7e-11 74.3 48 75.0
Lju1319A3T40 Lonicera japonica HOM05D002816 ORTHO05D005633 2.5e-07 60.5 31 90.3


User provided reference genes

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