Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038279 Camellia sinensis var. sinensis HOM05D005697 ORTHO05D006951 6.3e-109 397.9 274 100.0
Dinv27139 Davidia involucrata HOM05D005697 ORTHO05D006951 6.0e-51 205.3 266 54.5
Rhsim02G0049300 Rhododendron simsii HOM05D005697 ORTHO05D006951 1.7e-50 203.8 249 53.0
vmacro15494 Vaccinium macrocarpon HOM05D005697 ORTHO05D006951 1.3e-48 197.6 269 50.9
Manes.03G155600 Manihot esculenta HOM05D005697 ORTHO05D006951 1.2e-43 181.0 258 51.2
QL06p022167 Quercus lobata HOM05D005697 ORTHO05D006951 1.0e-42 177.9 245 48.6
Cc03_g06970 Coffea canephora HOM05D005697 ORTHO05D006951 3.9e-42 176.0 250 46.0
Peaxi162Scf01007g00013 Petunia axillaris HOM05D005697 ORTHO05D006951 8.7e-42 174.9 260 44.2
MSTRG.21934 Avicennia marina HOM05D005697 ORTHO05D006951 1.1e-41 174.5 258 50.8
Thecc.04G218700 Theobroma cacao HOM05D005697 ORTHO05D006951 1.5e-41 174.1 252 46.0
CiPaw.02G104000 Carya illinoinensis HOM05D005697 ORTHO05D006951 4.8e-40 169.1 244 46.3
MD13G1226700 Malus domestica HOM05D005697 ORTHO05D006951 8.1e-40 168.3 249 55.0
Sabra10G0044100 Salix brachista HOM05D005697 ORTHO05D006951 1.1e-39 167.9 229 47.2
Lsat_1_v5_gn_6_67840 Lactuca sativa HOM05D005697 ORTHO05D006951 1.4e-39 167.5 250 43.6
Cpa.g.sc59.48 Carica papaya HOM05D005697 ORTHO05D006951 2.4e-39 166.8 268 43.7
AUR62035897 Chenopodium quinoa HOM05D005697 ORTHO05D006951 4.0e-39 166.0 237 47.3
Oeu008818.1 Olea europaea HOM05D005697 ORTHO05D006951 5.3e-39 165.6 251 43.8
CiPaw.01G174800 Carya illinoinensis HOM05D005697 ORTHO05D006951 9.0e-39 164.9 241 46.9
RcHm_v2.0_Chr4g0396171 Rosa chinensis HOM05D005697 ORTHO05D006951 1.2e-38 164.5 277 43.3
TAR365G1050 Trochodendron aralioides HOM05D005697 ORTHO05D006951 1.5e-38 164.1 242 46.7
Nitab4.5_0001998g0050 Nicotiana tabacum HOM05D005697 ORTHO05D006951 2.0e-38 163.7 253 46.6
SalBow3G1865 Salvia bowleyana HOM05D005697 ORTHO05D006951 2.6e-38 163.3 252 42.9
Haze_11516 Corylus avellana HOM05D005697 ORTHO05D006951 3.4e-38 162.9 254 45.3
FvH4_4g05260 Fragaria vesca HOM05D005697 ORTHO05D006951 4.5e-38 162.5 276 43.8
SalBow3G3550 Salvia bowleyana HOM05D005697 ORTHO05D006951 4.5e-38 162.5 252 42.9
PGSC0003DMG400008629 Solanum tuberosum HOM05D005697 ORTHO05D006951 4.5e-38 162.5 250 48.4
MSTRG.24645 Avicennia marina HOM05D005697 ORTHO05D006951 5.8e-38 162.2 256 44.9
FAN22G1047 Fragaria x ananassa HOM05D005697 ORTHO05D006951 5.8e-38 162.2 275 42.9
Prupe.1G054100 Prunus persica HOM05D005697 ORTHO05D006951 5.8e-38 162.2 249 44.6
Haze_11522 Corylus avellana HOM05D005697 ORTHO05D006951 7.6e-38 161.8 254 44.9
FAN07G2767 Fragaria x ananassa HOM05D005697 ORTHO05D006951 1.3e-37 161.0 275 42.5
FAN17G2424 Fragaria x ananassa HOM05D005697 ORTHO05D006951 1.3e-37 161.0 275 42.9
FAN12G1366 Fragaria x ananassa HOM05D005697 ORTHO05D006951 1.7e-37 160.6 276 43.5
Nitab4.5_0002738g0060 Nicotiana tabacum HOM05D005697 ORTHO05D006951 2.9e-37 159.8 253 43.5
Oeu007537.1 Olea europaea HOM05D005697 ORTHO05D006951 2.9e-37 159.8 251 42.2
Potri.008G174400 Populus trichocarpa HOM05D005697 ORTHO05D006951 2.9e-37 159.8 272 42.6
Solyc12g097060.1 Solanum lycopersicum HOM05D005697 ORTHO05D006951 2.9e-37 159.8 250 47.2
Duzib151G0493 Durio zibethinus HOM05D005697 ORTHO05D006951 6.4e-37 158.7 253 42.3
AUR62035343 Chenopodium quinoa HOM05D005697 ORTHO05D006951 1.1e-36 157.9 227 46.7
COL.COLO4_07143 Corchorus olitorius HOM05D005697 ORTHO05D006951 1.4e-36 157.5 251 47.0
Potri.010G062600 Populus trichocarpa HOM05D005697 ORTHO05D006951 2.4e-36 156.8 251 45.0
TAR362G0923 Trochodendron aralioides HOM05D005697 ORTHO05D006951 2.4e-36 156.8 246 50.0
Cfa014837 Carpinus fangiana HOM05D005697 ORTHO05D006951 3.2e-36 156.4 240 47.5
Glyma.20G081000 Glycine max HOM05D005697 ORTHO05D006951 1.6e-35 154.1 252 43.3
EL10Ac3g06730 Beta vulgaris HOM05D005697 ORTHO05D006951 2.7e-35 153.3 230 46.5
Solyc09g091060.3 Solanum lycopersicum HOM05D005697 ORTHO05D006951 2.7e-35 153.3 262 41.2
Atru.chr4.1856 Acer truncatum HOM05D005697 ORTHO05D006951 7.9e-35 151.8 270 50.0
Eucgr.H02876 Eucalyptus grandis HOM05D005697 ORTHO05D006951 1.0e-34 151.4 249 48.2
Hund24861 Selenicereus undatus HOM05D005697 ORTHO05D006951 1.0e-34 151.4 225 48.0
CAN.G812.40 Capsicum annuum HOM05D005697 ORTHO05D006951 3.0e-34 149.8 262 45.8
Actinidia11384 Actinidia chinensis HOM05D005697 ORTHO05D006951 3.9e-34 149.4 102 76.5
Sopen09g034040 Solanum pennellii HOM05D005697 ORTHO05D006951 6.7e-34 148.7 262 42.4
DCAR_024305 Daucus carota HOM05D005697 ORTHO05D006951 8.7e-34 148.3 249 40.6
MBI07_g15425_MAGBIO Magnolia biondii HOM05D005697 ORTHO05D006951 8.7e-34 148.3 238 42.9
TWI53G2060 Tripterygium wilfordii HOM05D005697 ORTHO05D006951 1.1e-33 147.9 258 43.4
arahy.Tifrunner.gnm1.ann1.BKX7X4 Arachis hypogaea HOM05D005697 ORTHO05D006951 1.9e-33 147.1 252 41.7
ECA233G3140 Erigeron canadensis HOM05D005697 ORTHO05D006951 2.5e-33 146.7 209 45.5
TPR.G23989 Trifolium pratense HOM05D005697 ORTHO05D006951 3.3e-33 146.4 252 39.3
Medtr1g046070 Medicago truncatula HOM05D005697 ORTHO05D006951 4.3e-33 146.0 250 47.2
Nn1g03052 Nelumbo nucifera HOM05D005697 ORTHO05D006951 4.3e-33 146.0 250 42.8
Sabra08G0132900 Salix brachista HOM05D005697 ORTHO05D006951 5.6e-33 145.6 257 40.9
Manes.15G047800 Manihot esculenta HOM05D005697 ORTHO05D006951 7.4e-33 145.2 259 40.9
arahy.Tifrunner.gnm1.ann1.1SMG72 Arachis hypogaea HOM05D005697 ORTHO05D006951 9.6e-33 144.8 252 41.3
TWI09G0842 Tripterygium wilfordii HOM05D005697 ORTHO05D006951 1.3e-32 144.4 232 46.1
Glyma.10G130200 Glycine max HOM05D005697 ORTHO05D006951 2.1e-32 143.7 252 42.5
CANSAT78G1745 Cannabis sativa HOM05D005697 ORTHO05D006951 2.8e-32 143.3 278 42.1
ClCG06G017260 Citrullus lanatus HOM05D005697 ORTHO05D006951 3.7e-32 142.9 251 43.0
VMungo0720G1671 Vigna mungo HOM05D005697 ORTHO05D006951 2.4e-31 140.2 252 41.3
Peaxi162Scf00125g01016 Petunia axillaris HOM05D005697 ORTHO05D006951 5.3e-31 139.0 257 43.2
GSVIVG01001870001 Vitis vinifera HOM05D005697 ORTHO05D006951 6.9e-31 138.7 103 75.7
Lalb_Chr03g0036851 Lupinus albus HOM05D005697 ORTHO05D006951 1.2e-30 137.9 252 44.8
Sed0013611 Sechium edule HOM05D005697 ORTHO05D006951 2.0e-30 137.1 243 42.4
CsaV3_1G001240 Cucumis sativus L. HOM05D005697 ORTHO05D006951 2.6e-30 136.7 232 42.2
Duzib212G0179 Durio zibethinus HOM05D005697 ORTHO05D006951 4.5e-30 136.0 244 43.4
Actinidia39942 Actinidia chinensis HOM05D005697 ORTHO05D006951 1.0e-29 134.8 214 44.9
PSO339G1845 Papaver somniferum HOM05D005697 ORTHO05D006951 4.9e-29 132.5 268 37.7
Nn3g19835 Nelumbo nucifera HOM05D005697 ORTHO05D006951 2.5e-28 130.2 245 42.4
Sc19g0005740 Simmondsia chinensis HOM05D005697 ORTHO05D006951 2.5e-28 130.2 197 46.7
Sed0003887 Sechium edule HOM05D005697 ORTHO05D006951 3.2e-28 129.8 232 39.2
MELO3C026270.2 Cucumis melo HOM05D005697 ORTHO05D006951 5.5e-28 129.0 232 43.1
PSO063G5372 Papaver somniferum HOM05D005697 ORTHO05D006951 3.5e-27 126.3 254 38.6
Gorai.006G218600 Gossypium raimondii HOM05D005697 ORTHO05D006951 7.9e-27 125.2 247 38.9
Gohir.D09G195200 Gossypium hirsutum HOM05D005697 ORTHO05D006951 1.0e-26 124.8 247 38.9
Phvul.007G233100 Phaseolus vulgaris HOM05D005697 ORTHO05D006951 1.0e-26 124.8 226 40.7
Lj6g0023034 Lotus japonicus HOM05D005697 ORTHO05D006951 1.3e-26 124.4 222 39.6
Ciclev10005805m.g Citrus clementina HOM05D005697 ORTHO05D006951 5.1e-26 122.5 122 55.7
Ah.13g075010 Amaranthus hybridus HOM05D005697 ORTHO05D006951 4.3e-25 119.4 222 38.7
Lalb_Chr19g0128591 Lupinus albus HOM05D005697 ORTHO05D006951 1.6e-24 117.5 215 40.5
SGA_v2.0_scaffold31G12607 Striga asiatica HOM05D005697 ORTHO05D006951 2.2e-24 117.1 262 35.9
CAN.G566.3 Capsicum annuum HOM05D005697 ORTHO05D006951 6.3e-24 115.5 103 60.2
CDE05G2497 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 1.8e-23 114.0 227 44.9
Migut.N00325 Erythranthe guttata HOM05D005697 ORTHO05D006951 3.8e-21 106.3 239 36.8
Gohir.A09G201000 Gossypium hirsutum HOM05D005697 ORTHO05D006951 2.5e-20 103.6 247 36.0
THA.LOC104804567 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 3.2e-20 103.2 211 38.4
THA.LOC104808734 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 1.6e-19 100.9 214 39.3
Glyma.14G108200 Glycine max HOM05D005697 ORTHO05D006951 6.1e-19 99.0 101 56.4
THA.LOC104821627 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 1.4e-18 97.8 100 58.0
Psat6g106680 Pisum sativum HOM05D005697 ORTHO05D006951 1.8e-18 97.4 91 59.3
Aa31LG9G4120 Aethionema arabicum HOM05D005697 ORTHO05D006951 2.3e-18 97.1 249 40.2
A04p08640 Brassica napus HOM05D005697 ORTHO05D006951 6.7e-18 95.5 229 34.5
BcaC02g09418 Brassica carinata HOM05D005697 ORTHO05D006951 8.8e-18 95.1 271 32.5
BolC4t25821H Brassica oleracea HOM05D005697 ORTHO05D006951 8.8e-18 95.1 271 32.5
BcaB03g16086 Brassica carinata HOM05D005697 ORTHO05D006951 1.1e-17 94.7 271 32.1
CDE02G0931 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 1.1e-17 94.7 209 44.0
A07p08110 Brassica napus HOM05D005697 ORTHO05D006951 4.3e-17 92.8 117 50.4
Carub.0007s2900 Capsella rubella HOM05D005697 ORTHO05D006951 4.3e-17 92.8 249 34.1
Thhalv10002645m.g Eutrema salsugineum HOM05D005697 ORTHO05D006951 4.3e-17 92.8 111 54.1
C04p42400 Brassica napus HOM05D005697 ORTHO05D006951 5.7e-17 92.4 271 32.1
BcaB06g26605 Brassica carinata HOM05D005697 ORTHO05D006951 9.7e-17 91.7 113 53.1
BcaC06g35669 Brassica carinata HOM05D005697 ORTHO05D006951 1.3e-16 91.3 113 52.2
C07p12260 Brassica napus HOM05D005697 ORTHO05D006951 1.3e-16 91.3 113 52.2
BolC7t41693H Brassica oleracea HOM05D005697 ORTHO05D006951 1.3e-16 91.3 113 52.2
BraA07t28595Z Brassica rapa HOM05D005697 ORTHO05D006951 1.3e-16 91.3 113 52.2
CARHR219170 Cardamine hirsuta HOM05D005697 ORTHO05D006951 2.8e-16 90.1 249 32.9
HPP92_005453 Vanilla planifolia HOM05D005697 ORTHO05D006951 2.8e-16 90.1 104 49.0
AL7G43130 Arabidopsis lyrata HOM05D005697 ORTHO05D006951 3.7e-16 89.7 247 33.6
Carub.0003s2459 Capsella rubella HOM05D005697 ORTHO05D006951 3.7e-16 89.7 117 52.1
AT3G23930 Arabidopsis thaliana HOM05D005697 ORTHO05D006951 4.8e-16 89.4 114 50.0
Sp7g11140 Schrenkiella parvula HOM05D005697 ORTHO05D006951 4.8e-16 89.4 249 33.3
AT4G13540 Arabidopsis thaliana HOM05D005697 ORTHO05D006951 1.8e-15 87.4 249 33.7
Sp3g22030 Schrenkiella parvula HOM05D005697 ORTHO05D006951 1.8e-15 87.4 117 48.7
AL3G39620 Arabidopsis lyrata HOM05D005697 ORTHO05D006951 5.3e-15 85.9 118 48.3
Aa31LG8G10940 Aethionema arabicum HOM05D005697 ORTHO05D006951 7.7e-14 82.0 241 31.1
PGSC0003DMG400011585 Solanum tuberosum HOM05D005697 ORTHO05D006951 1.0e-13 81.6 193 39.4
Thhalv10026312m.g Eutrema salsugineum HOM05D005697 ORTHO05D006951 1.4e-12 77.8 255 31.0
CARHR100340 Cardamine hirsuta HOM05D005697 ORTHO05D006951 1.2e-11 74.7 262 29.8
unitig_26.g9545 Utricularia gibba HOM05D005697 ORTHO05D006951 2.1e-11 73.9 264 27.3
Nitab4.5_0000451g0070 Nicotiana tabacum HOM05D005697 ORTHO05D006951 2.3e-10 70.5 78 52.6
CDE08G0630 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 6.3e-08 62.4 163 39.9
Nitab4.5_0000867g0050 Nicotiana tabacum HOM05D005697 ORTHO05D006951 2.4e-07 60.5 71 49.3


User provided reference genes

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