Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038259 Camellia sinensis var. sinensis HOM05D005470 ORTHO05D006855 1.1e-60 236.5 121 100.0
CSS0013378 Camellia sinensis var. sinensis HOM05D005470 ORTHO05D006855 1.8e-23 112.8 104 60.6
Dinv04663 Davidia involucrata HOM05D005470 ORTHO05D006855 7.5e-22 107.5 135 47.4
Rhsim13G0044300 Rhododendron simsii HOM05D006020 ORTHO05D006855 1.7e-21 106.3 90 61.1
Cfa002558 Carpinus fangiana HOM05D005470 ORTHO05D006855 2.9e-21 105.5 76 65.8
RcHm_v2.0_Chr6g0285101 Rosa chinensis HOM05D005470 ORTHO05D006855 3.7e-21 105.1 80 65.0
DCAR_018553 Daucus carota HOM05D005470 ORTHO05D006855 6.4e-21 104.4 90 58.9
arahy.Tifrunner.gnm1.ann1.4GE7F8 Arachis hypogaea HOM05D005470 ORTHO05D006855 8.3e-21 104.0 128 46.9
arahy.Tifrunner.gnm1.ann1.KE0QUS Arachis hypogaea HOM05D005470 ORTHO05D006855 8.3e-21 104.0 128 46.9
arahy.Tifrunner.gnm1.ann1.07T9WF Arachis hypogaea HOM05D005470 ORTHO05D006855 1.1e-20 103.6 128 46.1
vmacro02749 Vaccinium macrocarpon HOM05D005470 ORTHO05D006855 1.9e-20 102.8 90 61.1
Cc01_g17220 Coffea canephora HOM05D005470 ORTHO05D006855 3.2e-20 102.1 95 57.9
Sc17g0002580 Simmondsia chinensis HOM05D005470 ORTHO05D006855 3.2e-20 102.1 119 51.3
Prupe.8G204600 Prunus persica HOM05D005470 ORTHO05D006855 4.1e-20 101.7 76 65.8
CiPaw.04G106400 Carya illinoinensis HOM05D005470 ORTHO05D006855 9.2e-20 100.5 90 57.8
TAR365G0091 Trochodendron aralioides HOM05D005470 ORTHO05D006855 9.2e-20 100.5 84 58.3
TAR365G1033 Trochodendron aralioides HOM05D005470 ORTHO05D006855 9.2e-20 100.5 84 58.3
QL03p049466 Quercus lobata HOM05D005470 ORTHO05D006855 1.6e-19 99.8 128 49.2
Lj1g0018515 Lotus japonicus HOM05D005470 ORTHO05D006855 2.0e-19 99.4 86 55.8
Medtr7g058920 Medicago truncatula HOM05D005470 ORTHO05D006855 2.0e-19 99.4 86 62.8
CsaV3_3G028840 Cucumis sativus L. HOM05D005470 ORTHO05D006855 2.7e-19 99.0 74 64.9
Lj2A1133T34 Lonicera japonica HOM05D005470 ORTHO05D006855 2.7e-19 99.0 75 65.3
GSVIVG01028578001 Vitis vinifera HOM05D005470 ORTHO05D006855 3.5e-19 98.6 74 64.9
ClCG07G001860 Citrullus lanatus HOM05D005470 ORTHO05D006855 4.6e-19 98.2 87 58.6
Haze_24781 Corylus avellana HOM05D005470 ORTHO05D006855 4.6e-19 98.2 97 53.6
CsaV3_6G036910 Cucumis sativus L. HOM05D005470 ORTHO05D006855 4.6e-19 98.2 74 63.5
FAN24G1307 Fragaria x ananassa HOM05D005470 ORTHO05D006855 4.6e-19 98.2 88 56.8
Manes.12G042650 Manihot esculenta HOM05D005470 ORTHO05D006855 4.6e-19 98.2 73 64.4
FvH4_2g19300 Fragaria vesca HOM05D005470 ORTHO05D006855 6.0e-19 97.8 88 55.7
Oeu015466.1 Olea europaea HOM05D005470 ORTHO05D006855 6.0e-19 97.8 117 48.7
Potri.002G240800 Populus trichocarpa HOM05D005470 ORTHO05D006855 7.8e-19 97.4 85 57.6
Migut.D00523 Erythranthe guttata HOM05D005470 ORTHO05D006855 1.3e-18 96.7 89 59.6
Nitab4.5_0000866g0040 Nicotiana tabacum HOM05D005470 ORTHO05D006855 1.3e-18 96.7 76 63.2
Nitab4.5_0003790g0040 Nicotiana tabacum HOM05D005470 ORTHO05D006855 1.3e-18 96.7 76 63.2
Hma1.2p1_1061F.1_g253380 Hydrangea macrophylla HOM05D005470 ORTHO05D006855 2.3e-18 95.9 105 54.3
TPR.G15281 Trifolium pratense HOM05D005470 ORTHO05D006855 2.3e-18 95.9 76 63.2
Ca_07533_v3 Cicer arietinum L. HOM05D005470 ORTHO05D006855 3.0e-18 95.5 74 64.9
HanXRQChr04g0110691 Helianthus annuus HOM05D005470 ORTHO05D006855 3.0e-18 95.5 130 47.7
Nitab4.5_0000866g0080 Nicotiana tabacum HOM05D005470 ORTHO05D006855 3.0e-18 95.5 76 63.2
Psat3g144240 Pisum sativum HOM05D005470 ORTHO05D006855 3.0e-18 95.5 76 63.2
PGR083G1301 Punica granatum HOM05D005470 ORTHO05D006855 3.0e-18 95.5 85 56.5
MELO3C026704.2 Cucumis melo HOM05D005470 ORTHO05D006855 3.9e-18 95.1 74 63.5
Atru.chr5.1498 Acer truncatum HOM05D005470 ORTHO05D006855 5.0e-18 94.7 129 45.7
Migut.I00044 Erythranthe guttata HOM05D005470 ORTHO05D006855 5.0e-18 94.7 90 56.7
Hma1.2p1_1061F.1_g253390 Hydrangea macrophylla HOM05D005470 ORTHO05D006855 5.0e-18 94.7 130 45.4
Sabra02G0183400 Salix brachista HOM05D005470 ORTHO05D006855 5.0e-18 94.7 85 57.6
Cpa.g.sc8.172 Carica papaya HOM05D005470 ORTHO05D006855 6.6e-18 94.4 87 57.5
AUR62008875 Chenopodium quinoa HOM05D005470 ORTHO05D006855 6.6e-18 94.4 81 59.3
Nn3g19926 Nelumbo nucifera HOM05D005470 ORTHO05D006855 6.6e-18 94.4 84 56.0
CANSAT56G1556 Cannabis sativa HOM05D005470 ORTHO05D006855 8.6e-18 94.0 86 54.7
unitig_92.g28106 Utricularia gibba HOM05D005470 ORTHO05D006855 8.6e-18 94.0 74 60.8
Solyc09g061680.3 Solanum lycopersicum HOM05D005470 ORTHO05D006855 1.1e-17 93.6 132 47.7
Sopen09g024670 Solanum pennellii HOM05D005470 ORTHO05D006855 1.5e-17 93.2 76 61.8
MD10G1166100 Malus domestica HOM05D005470 ORTHO05D006855 1.9e-17 92.8 89 55.1
Duzib211G0062 Durio zibethinus HOM05D005470 ORTHO05D006855 2.5e-17 92.4 84 56.0
PGSC0003DMG400002375 Solanum tuberosum HOM05D005470 ORTHO05D006855 2.5e-17 92.4 85 56.5
Lalb_Chr19g0125551 Lupinus albus HOM05D005470 ORTHO05D006855 4.3e-17 91.7 87 52.9
CAN.G1273.33 Capsicum annuum HOM05D005470 ORTHO05D006855 5.6e-17 91.3 84 59.5
Actinidia37584 Actinidia chinensis HOM05D005470 ORTHO05D006855 7.3e-17 90.9 94 56.4
Lsat_1_v5_gn_8_90101 Lactuca sativa HOM05D005470 ORTHO05D006855 7.3e-17 90.9 91 54.9
THA.LOC104802678 Tarenaya hassleriana HOM05D005470 ORTHO05D006855 7.3e-17 90.9 89 56.2
MSTRG.21429 Avicennia marina HOM05D005470 ORTHO05D006855 9.5e-17 90.5 85 55.3
Ciclev10021316m.g Citrus clementina HOM05D005470 ORTHO05D006855 9.5e-17 90.5 73 61.6
Nn1g07785 Nelumbo nucifera HOM05D005470 ORTHO05D006855 9.5e-17 90.5 83 54.2
EL10Ac7g17787 Beta vulgaris HOM05D005470 ORTHO05D006855 1.2e-16 90.1 134 43.3
SGA_v2.0_scaffold8G04652 Striga asiatica HOM05D005470 ORTHO05D006855 1.2e-16 90.1 128 48.4
AUR62031834 Chenopodium quinoa HOM05D005470 ORTHO05D006855 1.6e-16 89.7 89 53.9
PSO478G2025 Papaver somniferum HOM05D005470 ORTHO05D006855 1.6e-16 89.7 131 45.8
TWI75G1873 Tripterygium wilfordii HOM05D005470 ORTHO05D006855 1.6e-16 89.7 73 57.5
Gohir.A07G156000 Gossypium hirsutum HOM05D005470 ORTHO05D006855 2.1e-16 89.4 73 63.0
Gohir.D07G162300 Gossypium hirsutum HOM05D005470 ORTHO05D006855 2.1e-16 89.4 73 63.0
Gorai.001G185900 Gossypium raimondii HOM05D005470 ORTHO05D006855 2.1e-16 89.4 73 63.0
PSO017G3643 Papaver somniferum HOM05D005470 ORTHO05D006855 2.1e-16 89.4 92 54.3
Glyma.18G172500 Glycine max HOM05D005470 ORTHO05D006855 2.8e-16 89.0 87 51.7
Sed0016487 Sechium edule HOM05D005470 ORTHO05D006855 2.8e-16 89.0 74 60.8
Atru.chr5.2014 Acer truncatum HOM05D005470 ORTHO05D006855 4.7e-16 88.2 76 55.3
Aqoxy2G03764 Aquilegia oxysepala HOM05D005470 ORTHO05D006855 6.2e-16 87.8 84 56.0
Thecc.01G227800 Theobroma cacao HOM05D005470 ORTHO05D006855 6.2e-16 87.8 78 57.7
Ah.08g214020 Amaranthus hybridus HOM05D005470 ORTHO05D006855 1.4e-15 86.7 135 40.7
Hund18358 Selenicereus undatus HOM05D005470 ORTHO05D006855 1.4e-15 86.7 95 53.7
TAR636G1319 Trochodendron aralioides HOM05D005470 ORTHO05D006855 1.4e-15 86.7 84 54.8
Eucgr.H00804 Eucalyptus grandis HOM05D005470 ORTHO05D006855 1.8e-15 86.3 90 50.0
SHI28627 Sapria himalayana HOM05D005470 ORTHO05D006855 1.8e-15 86.3 72 58.3
VMungo0516G0001 Vigna mungo HOM05D005470 ORTHO05D006855 4.0e-15 85.1 86 50.0
HanXRQChr16g0514371 Helianthus annuus HOM05D005470 ORTHO05D006855 1.2e-14 83.6 70 62.9
MBI07_g00286_MAGBIO Magnolia biondii HOM05D004483 ORTHO05D005609 1.3e-13 80.1 80 52.5
Phvul.007G209400 Phaseolus vulgaris HOM05D005470 ORTHO05D006855 1.3e-13 80.1 76 52.6
ATR0736G181 Amborella trichopoda HOM05D005470 ORTHO05D006855 1.7e-13 79.7 92 54.3
AT5G48840 Arabidopsis thaliana HOM05D005470 ORTHO05D006855 4.9e-13 78.2 86 50.0
AL8G22020 Arabidopsis lyrata HOM05D005470 ORTHO05D006855 1.1e-12 77.0 86 48.8
Peaxi162Scf00107g01116 Petunia axillaris HOM05D005470 ORTHO05D006855 1.9e-12 76.3 135 38.5
CDE01G0096 Ceratophyllum demersum HOM05D005470 ORTHO05D006855 3.2e-12 75.5 73 54.8
vmacro15783 Vaccinium macrocarpon HOM05D005470 ORTHO05D006855 7.1e-12 74.3 96 45.8
Carub.0008s0857 Capsella rubella HOM05D005470 ORTHO05D006855 1.6e-11 73.2 74 51.4
Aa31sc866G40 Aethionema arabicum HOM05D005470 ORTHO05D006855 2.1e-11 72.8 85 49.4
BcaC06g30753 Brassica carinata HOM05D005470 ORTHO05D006855 1.3e-10 70.1 88 47.7
Pp3c24_12730 Physcomitrium patens HOM05D005470 ORTHO05D006855 3.0e-10 68.9 115 40.0
A06p38870 Brassica napus HOM05D006020 ORTHO05D007665 5.1e-10 68.2 88 46.6
C07p39460 Brassica napus HOM05D005470 ORTHO05D006855 5.1e-10 68.2 88 46.6
BraA06t26801Z Brassica rapa HOM05D005470 ORTHO05D006855 6.6e-10 67.8 88 46.6
CARHR182880 Cardamine hirsuta HOM05D005470 ORTHO05D006855 6.6e-10 67.8 131 35.9
Thhalv10004618m.g Eutrema salsugineum HOM05D005470 ORTHO05D006855 6.6e-10 67.8 90 42.2
vmacro15781 Vaccinium macrocarpon HOM05D005470 ORTHO05D006855 6.6e-10 67.8 76 50.0
BcaC06g30729 Brassica carinata HOM05D005470 ORTHO05D006855 1.1e-09 67.0 89 46.1
Sp2g19240 Schrenkiella parvula HOM05D005470 ORTHO05D006855 1.1e-09 67.0 89 42.7
BolC7t44465H Brassica oleracea HOM05D005470 ORTHO05D006855 1.9e-09 66.2 90 45.6
SMO351G0371 Selaginella moellendorffii HOM05D005470 ORTHO05D006855 2.5e-09 65.9 121 39.7
SMO144G0038 Selaginella moellendorffii HOM05D005470 ORTHO05D006855 3.3e-09 65.5 115 39.1
HPP92_021568 Vanilla planifolia HOM05D005470 ORTHO05D006855 4.3e-09 65.1 131 38.9
vmacro23327 Vaccinium macrocarpon HOM05D005470 ORTHO05D006855 7.3e-09 64.3 47 61.7
Mapoly0006s0023 Marchantia polymorpha HOM05D005470 ORTHO05D006855 1.2e-08 63.5 75 48.0
CANSAT54G2179 Cannabis sativa HOM05D005470 ORTHO05D006855 4.7e-08 61.6 90 43.3
CAN.G122.7 Capsicum annuum HOM05D005470 ORTHO05D006855 8.1e-08 60.8 82 42.7
SEGI_26814 Sequoiadendron giganteum HOM05D005470 ORTHO05D006855 5.2e-07 58.2 89 42.7
SEGI_32261 Sequoiadendron giganteum HOM05D005470 ORTHO05D006855 1.2e-06 57.0 89 41.6
CBR_g41676 Chara braunii HOM05D005470 ORTHO05D006855 1.5e-06 56.6 85 42.4


User provided reference genes

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