Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038240 Camellia sinensis var. sinensis HOM05D007498 ORTHO05D009384 1.5e-220 769.2 402 100.0
Actinidia09741 Actinidia chinensis HOM05D007498 ORTHO05D009384 5.1e-176 621.3 402 82.3
Actinidia13735 Actinidia chinensis HOM05D007498 ORTHO05D009384 8.8e-176 620.5 403 81.4
Rhsim09G0054300 Rhododendron simsii HOM05D007498 ORTHO05D009384 2.0e-172 609.4 450 74.0
Rhsim06G0166900 Rhododendron simsii HOM05D007498 ORTHO05D009384 7.7e-172 607.4 450 74.0
Dinv08726 Davidia involucrata HOM05D007498 ORTHO05D009384 3.8e-171 605.1 402 79.6
vmacro12166 Vaccinium macrocarpon HOM05D007498 ORTHO05D009384 5.7e-167 591.3 481 68.4
Hma1.2p1_0445F.1_g154420 Hydrangea macrophylla HOM05D007498 ORTHO05D009384 4.4e-159 565.1 402 73.1
Hma1.2p1_2381F.1_g320980 Hydrangea macrophylla HOM05D007498 ORTHO05D009384 1.3e-158 563.5 402 73.1
GSVIVG01030496001 Vitis vinifera HOM05D007498 ORTHO05D009384 1.1e-154 550.4 385 75.3
QL08p030918 Quercus lobata HOM05D007498 ORTHO05D009384 4.4e-151 538.5 388 72.9
TAR629G3061 Trochodendron aralioides HOM05D007498 ORTHO05D009384 1.2e-148 530.4 398 71.1
CiPaw.03G155900 Carya illinoinensis HOM05D007498 ORTHO05D009384 4.0e-144 515.4 387 69.3
Lj1A780G53 Lonicera japonica HOM05D007498 ORTHO05D009384 7.5e-143 511.1 401 66.8
Prupe.3G211200 Prunus persica HOM05D007498 ORTHO05D009384 9.2e-141 504.2 384 66.9
Manes.12G070200 Manihot esculenta HOM05D007498 ORTHO05D009384 2.0e-140 503.1 394 66.5
Cc05_g03070 Coffea canephora HOM05D007498 ORTHO05D009384 1.3e-139 500.4 400 65.5
Thecc.01G181300 Theobroma cacao HOM05D007498 ORTHO05D009384 8.6e-139 497.7 406 65.8
Sopen05g026100 Solanum pennellii HOM05D007498 ORTHO05D009384 3.3e-138 495.7 410 63.7
Nitab4.5_0006063g0010 Nicotiana tabacum HOM05D007498 ORTHO05D009384 9.5e-138 494.2 419 63.5
COL.COLO4_21864 Corchorus olitorius HOM05D007498 ORTHO05D009384 8.0e-137 491.1 405 65.9
Solyc05g042050.4 Solanum lycopersicum HOM05D007498 ORTHO05D009384 1.4e-136 490.3 410 62.9
Ciclev10015493m.g Citrus clementina HOM05D007498 ORTHO05D009384 1.7e-134 483.4 386 68.9
HanXRQChr12g0373631 Helianthus annuus HOM05D007498 ORTHO05D009384 8.3e-134 481.1 399 63.4
MD17G1103400 Malus domestica HOM05D007498 ORTHO05D009384 8.3e-134 481.1 385 65.7
CANSAT64G1398 Cannabis sativa HOM05D007498 ORTHO05D009384 1.1e-133 480.7 382 66.0
Nitab4.5_0000019g0370 Nicotiana tabacum HOM05D007498 ORTHO05D009384 1.1e-133 480.7 405 63.0
TWI18G0826 Tripterygium wilfordii HOM05D007498 ORTHO05D009384 1.4e-133 480.3 382 66.0
Eucgr.A01096 Eucalyptus grandis HOM05D007498 ORTHO05D009384 5.4e-133 478.4 357 70.0
PSO541G2474 Papaver somniferum HOM05D007498 ORTHO05D009384 2.7e-132 476.1 382 63.4
Lsat_1_v5_gn_7_95281 Lactuca sativa HOM05D007498 ORTHO05D009384 3.0e-131 472.6 407 59.5
Gohir.A07G187000 Gossypium hirsutum HOM05D007498 ORTHO05D009384 6.6e-131 471.5 385 65.5
Medtr3g080260 Medicago truncatula HOM05D007498 ORTHO05D009384 6.6e-131 471.5 397 62.0
Gorai.001G216600 Gossypium raimondii HOM05D007498 ORTHO05D009384 1.1e-130 470.7 385 65.2
Lsat_1_v5_gn_5_123880 Lactuca sativa HOM05D007498 ORTHO05D009384 1.5e-130 470.3 399 61.4
Peaxi162Scf00100g01524 Petunia axillaris HOM05D007498 ORTHO05D009384 3.3e-130 469.2 332 71.4
Sabra14G0119400 Salix brachista HOM05D007498 ORTHO05D009384 1.6e-129 466.8 418 61.2
PSO675G1300 Papaver somniferum HOM05D007498 ORTHO05D009384 4.7e-129 465.3 411 59.4
TPR.G34497 Trifolium pratense HOM05D007498 ORTHO05D009384 8.1e-129 464.5 362 65.2
RcHm_v2.0_Chr2g0158311 Rosa chinensis HOM05D007498 ORTHO05D009384 1.8e-128 463.4 396 62.6
Lj6g0022389 Lotus japonicus HOM05D007498 ORTHO05D009384 3.1e-128 462.6 390 64.4
MBI19_g41387_MAGBIO Magnolia biondii HOM05D007498 ORTHO05D009384 4.0e-128 462.2 391 61.1
Sc21g0001170 Simmondsia chinensis HOM05D007498 ORTHO05D009384 1.3e-126 457.2 367 65.1
FAN05G5059 Fragaria x ananassa HOM05D007498 ORTHO05D009384 3.7e-126 455.7 376 64.1
PGR042G1731 Punica granatum HOM05D007498 ORTHO05D009384 3.2e-125 452.6 392 62.0
Nn1g03383 Nelumbo nucifera HOM05D007498 ORTHO05D009384 2.1e-124 449.9 385 62.6
Phvul.006G012811 Phaseolus vulgaris HOM05D007498 ORTHO05D009384 2.1e-124 449.9 394 60.7
FvH4_6g42420 Fragaria vesca HOM05D007498 ORTHO05D009384 7.8e-124 448.0 376 62.0
Gorai.001G095600 Gossypium raimondii HOM05D007498 ORTHO05D009384 3.1e-120 436.0 388 62.1
Aqoxy1G04193 Aquilegia oxysepala HOM05D007498 ORTHO05D009384 1.5e-119 433.7 366 61.7
THA.LOC104815344 Tarenaya hassleriana HOM05D007498 ORTHO05D009384 2.0e-119 433.3 393 60.1
CsaV3_6G037690 Cucumis sativus L. HOM05D007498 ORTHO05D009384 2.2e-118 429.9 389 59.4
AL3G43270 Arabidopsis lyrata HOM05D007498 ORTHO05D009384 2.9e-118 429.5 390 61.0
MD09G1113300 Malus domestica HOM05D007498 ORTHO05D009384 2.9e-118 429.5 330 66.1
AT2G05755 Arabidopsis thaliana HOM05D007498 ORTHO05D009384 1.1e-117 427.6 376 62.2
CARHR103340 Cardamine hirsuta HOM05D007498 ORTHO05D009384 1.9e-117 426.8 377 61.8
Carub.0003s2696 Capsella rubella HOM05D007498 ORTHO05D009384 2.4e-117 426.4 385 60.0
Sp3g24210 Schrenkiella parvula HOM05D007498 ORTHO05D009384 1.6e-116 423.7 372 61.8
Sed0020195 Sechium edule HOM05D007498 ORTHO05D009384 6.0e-116 421.8 383 60.1
Gohir.D07G193500 Gossypium hirsutum HOM05D007498 ORTHO05D009384 1.7e-115 420.2 314 69.4
A03p44690 Brassica napus HOM05D007498 ORTHO05D009384 1.9e-114 416.8 371 60.4
Aa31LG8G11370 Aethionema arabicum HOM05D007498 ORTHO05D009384 2.5e-114 416.4 392 58.7
C03p55520 Brassica napus HOM05D007498 ORTHO05D009384 7.3e-114 414.8 366 60.9
BcaC01g03153 Brassica carinata HOM05D007498 ORTHO05D009384 2.1e-113 413.3 366 60.9
BcaB08g34508 Brassica carinata HOM05D007498 ORTHO05D009384 3.6e-113 412.5 371 60.9
BraA03t13603Z Brassica rapa HOM05D007498 ORTHO05D009384 2.0e-111 406.8 384 58.3
BolC3t17828H Brassica oleracea HOM05D000228 ORTHO05D001122 4.4e-111 405.6 379 58.8
Duzib138G1101 Durio zibethinus HOM05D007498 ORTHO05D009384 6.6e-107 391.7 408 56.6
ATR0059G023 Amborella trichopoda HOM05D007498 ORTHO05D009384 3.2e-101 372.9 369 55.8
MELO3C014431.2 Cucumis melo HOM05D007498 ORTHO05D009384 3.2e-101 372.9 429 50.8
ClCG07G002420 Citrullus lanatus HOM05D007498 ORTHO05D009384 8.4e-94 348.2 383 53.3
Gohir.A07G083200 Gossypium hirsutum HOM05D007498 ORTHO05D009384 9.3e-93 344.7 279 66.3
Gohir.D07G089300 Gossypium hirsutum HOM05D007498 ORTHO05D009384 6.0e-92 342.0 280 65.7
ECA234G3795 Erigeron canadensis HOM05D007498 ORTHO05D009384 1.8e-91 340.5 295 62.4
Thhalv10002583m.g Eutrema salsugineum HOM05D007498 ORTHO05D009384 1.1e-85 321.2 391 49.9
Psat5g106880 Pisum sativum HOM05D007498 ORTHO05D009384 6.7e-83 312.0 280 60.7
Ca_16281_v3 Cicer arietinum L. HOM05D007498 ORTHO05D009384 3.1e-80 303.1 396 46.5
FAN09G2551 Fragaria x ananassa HOM05D007498 ORTHO05D009384 1.3e-78 297.7 304 55.6
SEGI_23048 Sequoiadendron giganteum HOM05D007498 ORTHO05D009384 3.7e-73 279.6 388 41.0
Aqoxy1G02942 Aquilegia oxysepala HOM05D007498 ORTHO05D009384 1.7e-70 270.8 250 58.8
Potri.014G157700 Populus trichocarpa HOM05D007498 ORTHO05D009384 5.5e-69 265.8 220 65.9
CDE07G0657 Ceratophyllum demersum HOM05D000323 ORTHO05D009384 1.1e-66 258.1 344 45.1
FAN14G0249 Fragaria x ananassa HOM05D007498 ORTHO05D001133 5.2e-59 232.6 381 41.7
DCAR_019260 Daucus carota HOM05D007498 ORTHO05D001133 1.3e-57 228.0 167 67.1
Cpa.g.sc132.15 Carica papaya HOM05D007498 ORTHO05D009384 2.9e-54 216.9 143 74.1
AagrBONN_evm.TU.Sc2ySwM_344.4295 Anthoceros agrestis HOM05D007498 ORTHO05D009384 2.6e-50 203.8 390 34.1
MD09G1113200 Malus domestica HOM05D007498 ORTHO05D009384 2.2e-49 200.7 221 51.1
Mapoly0005s0243 Marchantia polymorpha HOM05D007498 ORTHO05D009384 1.9e-45 187.6 340 34.1
Pp3c17_21590 Physcomitrium patens HOM05D007498 ORTHO05D009384 1.0e-38 165.2 297 34.3
Haze_12773 Corylus avellana HOM05D007498 ORTHO05D009384 5.5e-37 159.5 210 49.5
SMO146G0054 Selaginella moellendorffii HOM05D007498 ORTHO05D009384 8.3e-33 145.6 295 31.5
Atru.chr6.3249 Acer truncatum HOM05D007498 ORTHO05D009384 2.0e-31 141.0 91 73.6
VMungo0540G0169 Vigna mungo HOM05D007498 ORTHO05D009384 1.0e-30 138.7 108 62.0
Aqoxy1G02941 Aquilegia oxysepala HOM05D007498 ORTHO05D009384 3.9e-22 110.2 94 56.4
Atru.chr6.3248 Acer truncatum HOM05D007498 ORTHO05D009384 8.6e-22 109.0 70 78.6
VMungo0540G1885 Vigna mungo HOM05D007498 ORTHO05D009384 3.2e-16 90.5 67 65.7
Cfa025227 Carpinus fangiana HOM05D007498 ORTHO05D009384 1.1e-08 65.5 335 25.1
BcaB06g26853 Brassica carinata HOM05D007498 ORTHO05D009384 2.3e-06 57.8 111 36.9


User provided reference genes

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