Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038235 Camellia sinensis var. sinensis HOM05D004934 ORTHO05D005924 6.6e-62 240.7 141 100.0
Actinidia35468 Actinidia chinensis HOM05D004934 ORTHO05D005924 1.8e-35 152.9 102 83.3
GSVIVG01036114001 Vitis vinifera HOM05D004934 ORTHO05D005924 6.9e-35 151.0 102 83.3
Hma1.2p1_0587F.1_g184270 Hydrangea macrophylla HOM05D004934 ORTHO05D005924 1.2e-31 140.2 102 78.4
TAR633G0561 Trochodendron aralioides HOM05D004934 ORTHO05D005924 1.2e-31 140.2 102 78.4
Nn2g14177 Nelumbo nucifera HOM05D004934 ORTHO05D005924 1.6e-31 139.8 102 76.5
vmacro14353 Vaccinium macrocarpon HOM05D004934 ORTHO05D005924 1.6e-31 139.8 102 76.5
Dinv22836 Davidia involucrata HOM05D004934 ORTHO05D005924 1.0e-30 137.1 102 80.4
Dinv42546 Davidia involucrata HOM05D004934 ORTHO05D005924 1.0e-30 137.1 102 75.5
Manes.04G003100 Manihot esculenta HOM05D004934 ORTHO05D005924 1.5e-29 133.3 107 74.8
PGR102G3359 Punica granatum HOM05D004934 ORTHO05D005924 1.5e-29 133.3 104 71.2
Cfa010007 Carpinus fangiana HOM05D004934 ORTHO05D005924 3.3e-29 132.1 105 70.5
TWI31G0143 Tripterygium wilfordii HOM05D004934 ORTHO05D005924 5.7e-29 131.3 107 73.8
CiPaw.14G099500 Carya illinoinensis HOM05D004934 ORTHO05D005924 1.3e-28 130.2 103 70.9
Thecc.09G281300 Theobroma cacao HOM05D004934 ORTHO05D005924 1.3e-28 130.2 105 68.6
QL01p012137 Quercus lobata HOM05D004934 ORTHO05D005924 4.8e-28 128.3 105 70.5
Aqoxy4G02760 Aquilegia oxysepala HOM05D004934 ORTHO05D005924 6.3e-28 127.9 102 71.6
Eucgr.B03844 Eucalyptus grandis HOM05D004934 ORTHO05D005924 6.3e-28 127.9 102 70.6
Sc06g0008770 Simmondsia chinensis HOM05D004934 ORTHO05D005924 3.1e-27 125.6 103 68.9
Duzib168G1921 Durio zibethinus HOM05D004934 ORTHO05D005924 4.1e-27 125.2 107 66.4
Gohir.D08G015900 Gossypium hirsutum HOM05D004934 ORTHO05D005924 4.1e-27 125.2 106 67.0
Gorai.004G010200 Gossypium raimondii HOM05D004934 ORTHO05D005924 6.9e-27 124.4 106 66.0
Prupe.6G131900 Prunus persica HOM05D004934 ORTHO05D005924 6.9e-27 124.4 103 68.0
Hund18761 Selenicereus undatus HOM05D004934 ORTHO05D005924 6.9e-27 124.4 102 69.6
MSTRG.12371 Avicennia marina HOM05D004934 ORTHO05D005924 1.5e-26 123.2 104 71.2
MD11G1166100 Malus domestica HOM05D004934 ORTHO05D005924 1.5e-26 123.2 99 69.7
Sed0020870 Sechium edule HOM05D004934 ORTHO05D005924 2.0e-26 122.9 105 74.3
EL10Ac7g15830 Beta vulgaris HOM05D004934 ORTHO05D005924 2.6e-26 122.5 103 68.9
Cc01_g09040 Coffea canephora HOM05D004934 ORTHO05D005924 2.6e-26 122.5 103 71.8
MSTRG.17705 Avicennia marina HOM05D004934 ORTHO05D005924 3.4e-26 122.1 104 69.2
Zm00001eb369670 Zea mays HOM05D004934 ORTHO05D005924 3.4e-26 122.1 104 66.3
FAN13G2036 Fragaria x ananassa HOM05D004934 ORTHO05D005924 4.5e-26 121.7 105 66.7
RcHm_v2.0_Chr5g0045641 Rosa chinensis HOM05D004934 ORTHO05D005924 4.5e-26 121.7 102 68.6
FvH4_5g26820 Fragaria vesca HOM05D004934 ORTHO05D005924 7.7e-26 120.9 105 66.7
FAN04G2654 Fragaria x ananassa HOM05D004934 ORTHO05D005924 7.7e-26 120.9 105 66.7
Rhsim13G0112500 Rhododendron simsii HOM05D004934 ORTHO05D005924 1.7e-25 119.8 137 58.4
Migut.N02487 Erythranthe guttata HOM05D004934 ORTHO05D005924 3.8e-25 118.6 102 71.6
Gohir.A08G005600 Gossypium hirsutum HOM05D004934 ORTHO05D005924 3.8e-25 118.6 106 64.2
ClCG01G011970 Citrullus lanatus HOM05D004934 ORTHO05D005924 5.0e-25 118.2 104 68.3
Nitab4.5_0000755g0070 Nicotiana tabacum HOM05D004934 ORTHO05D005924 1.1e-24 117.1 104 68.3
TAR636G0935 Trochodendron aralioides HOM05D004934 ORTHO05D005924 1.1e-24 117.1 99 69.7
Ca_19413_v3 Cicer arietinum L. HOM05D004934 ORTHO05D005924 1.4e-24 116.7 106 68.9
THA.LOC104800543 Tarenaya hassleriana HOM05D004934 ORTHO05D005924 1.4e-24 116.7 105 64.8
Gohir.A09G096200 Gossypium hirsutum HOM05D004934 ORTHO05D005924 1.9e-24 116.3 103 66.0
Ciclev10029605m.g Citrus clementina HOM05D004934 ORTHO05D005924 2.5e-24 115.9 102 63.7
arahy.Tifrunner.gnm1.ann1.Q13MWU Arachis hypogaea HOM05D004934 ORTHO05D005924 3.2e-24 115.5 106 67.0
arahy.Tifrunner.gnm1.ann1.Q2H7V9 Arachis hypogaea HOM05D004934 ORTHO05D005924 3.2e-24 115.5 106 67.0
Gohir.D09G095900 Gossypium hirsutum HOM05D004934 ORTHO05D005924 4.2e-24 115.2 103 65.0
Medtr4g052910 Medicago truncatula HOM05D004934 ORTHO05D005924 5.5e-24 114.8 106 64.2
Nitab4.5_0002914g0100 Nicotiana tabacum HOM05D004934 ORTHO05D005924 5.5e-24 114.8 103 68.0
Nitab4.5_0012586g0010 Nicotiana tabacum HOM05D004934 ORTHO05D005924 5.5e-24 114.8 102 64.7
TPR.G17236 Trifolium pratense HOM05D004934 ORTHO05D005924 7.2e-24 114.4 106 64.2
ATR0609G030 Amborella trichopoda HOM05D004934 ORTHO05D005924 1.6e-23 113.2 103 66.0
Duzib170G0221 Durio zibethinus HOM05D004934 ORTHO05D005924 1.6e-23 113.2 109 63.3
Glyma.12G090500 Glycine max HOM05D004934 ORTHO05D005924 1.6e-23 113.2 106 67.9
Oeu031471.1 Olea europaea HOM05D004934 ORTHO05D005924 1.6e-23 113.2 104 66.3
Lalb_Chr03g0028151 Lupinus albus HOM05D004934 ORTHO05D005924 2.1e-23 112.8 106 63.2
Peaxi162Scf00040g00023 Petunia axillaris HOM05D004934 ORTHO05D005924 2.1e-23 112.8 102 65.7
VMungo1127G1656 Vigna mungo HOM05D004934 ORTHO05D005924 2.1e-23 112.8 106 66.0
Sabra04G0136300 Salix brachista HOM05D004934 ORTHO05D005924 4.6e-23 111.7 110 63.6
Zm00001eb151060 Zea mays HOM05D004934 ORTHO05D005924 6.1e-23 111.3 104 61.5
AUR62036196 Chenopodium quinoa HOM05D004934 ORTHO05D005924 1.0e-22 110.5 103 63.1
Sabra09G0127300 Salix brachista HOM05D004934 ORTHO05D005924 1.0e-22 110.5 110 62.7
Nitab4.5_0000227g0280 Nicotiana tabacum HOM05D004934 ORTHO05D005924 1.8e-22 109.8 103 66.0
CANSAT54G1198 Cannabis sativa HOM05D004934 ORTHO05D005924 2.3e-22 109.4 114 61.4
CsaV3_1G014900 Cucumis sativus L. HOM05D004934 ORTHO05D005924 2.3e-22 109.4 102 66.7
Phvul.011G095100 Phaseolus vulgaris HOM05D004934 ORTHO05D005924 2.3e-22 109.4 106 64.2
Potri.009G163100 Populus trichocarpa HOM05D004934 ORTHO05D005924 2.3e-22 109.4 110 62.7
Atru.chr3.3218 Acer truncatum HOM05D004934 ORTHO05D005924 3.0e-22 109.0 106 62.3
AUR62009749 Chenopodium quinoa HOM05D004934 ORTHO05D005924 3.0e-22 109.0 103 62.1
Lsat_1_v5_gn_6_38900 Lactuca sativa HOM05D004934 ORTHO05D005924 3.0e-22 109.0 102 63.7
Aqoxy2G01124 Aquilegia oxysepala HOM05D004934 ORTHO05D005924 3.9e-22 108.6 97 71.1
PGSC0003DMG400026356 Solanum tuberosum HOM05D004934 ORTHO05D005924 5.1e-22 108.2 102 66.7
Glyma.11G182300 Glycine max HOM05D004934 ORTHO05D005924 6.7e-22 107.8 106 66.0
Lj3g0027260 Lotus japonicus HOM05D004934 ORTHO05D005924 8.8e-22 107.5 104 61.5
RcHm_v2.0_Chr5g0046361 Rosa chinensis HOM05D004934 ORTHO05D005924 8.8e-22 107.5 110 60.9
MD03G1147400 Malus domestica HOM05D004934 ORTHO05D005924 1.1e-21 107.1 99 63.6
CARHR120400 Cardamine hirsuta HOM05D004934 ORTHO05D005924 2.6e-21 105.9 104 60.6
Lalb_Chr01g0004881 Lupinus albus HOM05D004934 ORTHO05D005924 2.6e-21 105.9 106 60.4
ECA233G4139 Erigeron canadensis HOM05D004934 ORTHO05D005924 5.7e-21 104.8 102 61.8
Solyc11g068510.2 Solanum lycopersicum HOM05D004934 ORTHO05D005924 5.7e-21 104.8 102 64.7
Sopen11g027220 Solanum pennellii HOM05D004934 ORTHO05D005924 5.7e-21 104.8 102 64.7
CAN.G1524.5 Capsicum annuum HOM05D004934 ORTHO05D005924 1.3e-20 103.6 103 60.2
unitig_27.g25034 Utricularia gibba HOM05D004934 ORTHO05D005924 1.7e-20 103.2 102 57.8
Psat7g187720 Pisum sativum HOM05D004934 ORTHO05D005924 3.1e-19 99.0 106 58.5
Potri.004G201700 Populus trichocarpa HOM05D004934 ORTHO05D005924 4.1e-19 98.6 110 59.1
AL4G22570 Arabidopsis lyrata HOM05D004934 ORTHO05D005924 1.5e-18 96.7 107 59.8
HanXRQChr13g0397481 Helianthus annuus HOM05D004934 ORTHO05D005924 2.6e-18 95.9 102 58.8
PSO801G0293 Papaver somniferum HOM05D004934 ORTHO05D005924 3.4e-18 95.5 103 58.3
BcaC02g08235 Brassica carinata HOM05D004934 ORTHO05D005924 4.5e-18 95.1 104 55.8
C04p56900 Brassica napus HOM05D004934 ORTHO05D005924 4.5e-18 95.1 104 55.8
BolC4t27225H Brassica oleracea HOM05D004934 ORTHO05D005924 4.5e-18 95.1 104 55.8
PSO339G6001 Papaver somniferum HOM05D004934 ORTHO05D005924 4.5e-18 95.1 103 57.3
Sp4g10520 Schrenkiella parvula HOM05D004934 ORTHO05D005924 4.5e-18 95.1 108 57.4
AT2G27730 Arabidopsis thaliana HOM05D004934 ORTHO05D005924 1.0e-17 94.0 107 57.9
BraA07t29551Z Brassica rapa HOM05D004934 ORTHO05D005924 1.0e-17 94.0 104 56.7
BcaB06g28164 Brassica carinata HOM05D004934 ORTHO05D005924 1.3e-17 93.6 105 57.1
SGA_v2.0_scaffold295G47520 Striga asiatica HOM05D004934 ORTHO05D005924 1.7e-17 93.2 104 54.8
Peaxi162Scf00757g00422 Petunia axillaris HOM05D004934 ORTHO05D005924 2.9e-17 92.4 103 60.2
A07p18350 Brassica napus HOM05D004934 ORTHO05D005924 3.8e-17 92.0 103 57.3
A04p21090 Brassica napus HOM05D004934 ORTHO05D005924 5.0e-17 91.7 101 55.4
BraA04t17678Z Brassica rapa HOM05D004934 ORTHO05D005924 5.0e-17 91.7 101 55.4
Carub.0004s0847 Capsella rubella HOM05D004934 ORTHO05D005924 5.0e-17 91.7 104 56.7
Lsat_1_v5_gn_2_59421 Lactuca sativa HOM05D004934 ORTHO05D005924 5.0e-17 91.7 106 56.6
BcaC02g10898 Brassica carinata HOM05D004934 ORTHO05D005924 6.5e-17 91.3 105 55.2
C04p23930 Brassica napus HOM05D004934 ORTHO05D005924 6.5e-17 91.3 105 55.2
BolC4t23886H Brassica oleracea HOM05D004934 ORTHO05D005924 6.5e-17 91.3 105 55.2
DCAR_030570 Daucus carota HOM05D004934 ORTHO05D005924 2.5e-16 89.4 69 76.8
SGA_v2.0_scaffold177G39414 Striga asiatica HOM05D004934 ORTHO05D005924 3.2e-16 89.0 100 59.0
PSO339G2388 Papaver somniferum HOM05D004934 ORTHO05D005924 5.5e-16 88.2 108 58.3
vmacro03322 Vaccinium macrocarpon HOM05D004934 ORTHO05D005924 5.5e-16 88.2 179 42.5
Aa31LG5G8260 Aethionema arabicum HOM05D004934 ORTHO05D005924 7.2e-16 87.8 102 51.0
BcaB02g10110 Brassica carinata HOM05D004934 ORTHO05D005924 1.6e-15 86.7 102 51.0
MBI05_g05303_MAGBIO Magnolia biondii HOM05D004934 ORTHO05D005924 1.6e-15 86.7 70 68.6
Os08g0559000 Oryza sativa ssp. japonica HOM05D004934 ORTHO05D005924 2.7e-15 85.9 95 57.9
PSO384G4162 Papaver somniferum HOM05D004934 ORTHO05D005924 6.1e-15 84.7 108 56.5
CDE12G0371 Ceratophyllum demersum HOM05D004622 ORTHO05D005431 1.4e-14 83.6 98 53.1
HanXRQChr11g0324151 Helianthus annuus HOM05D004934 ORTHO05D005924 2.3e-14 82.8 108 51.9
SalBow3G2207 Salvia bowleyana HOM05D004934 ORTHO05D005924 3.0e-14 82.4 108 51.9
FAN11G2484 Fragaria x ananassa HOM05D004934 ORTHO05D005924 5.2e-14 81.6 105 50.5
CDE04G1608 Ceratophyllum demersum HOM05D004934 ORTHO05D005924 6.7e-14 81.3 109 51.4
FvH4_3g25100 Fragaria vesca HOM05D004934 ORTHO05D005924 8.8e-14 80.9 105 50.5
Thhalv10017451m.g Eutrema salsugineum HOM05D004934 ORTHO05D005924 2.6e-13 79.3 102 52.0
Oeu035567.1 Olea europaea HOM05D004934 ORTHO05D005924 2.6e-13 79.3 103 52.4
Zm00001eb343400 Zea mays HOM05D004934 ORTHO05D005924 3.3e-13 79.0 84 53.6
BcaC02g10901 Brassica carinata HOM05D004934 ORTHO05D005924 4.4e-13 78.6 102 49.0
DCAR_010342 Daucus carota HOM05D004934 ORTHO05D005924 9.7e-13 77.4 73 61.6
Zm00001eb416000 Zea mays HOM05D004934 ORTHO05D005924 1.3e-12 77.0 84 53.6
Pp3c1_22500 Physcomitrium patens HOM05D004934 ORTHO05D005924 3.7e-12 75.5 93 55.9
Nn6g34871 Nelumbo nucifera HOM05D004934 ORTHO05D005924 4.8e-12 75.1 54 77.8
Hma1.2p1_0587F.1_g184260 Hydrangea macrophylla HOM05D004934 ORTHO05D005924 8.2e-12 74.3 55 78.2
Hma1.2p1_3516F.1_g336514 Hydrangea macrophylla HOM05D004934 ORTHO05D005924 8.2e-12 74.3 55 78.2
FAN25G2937 Fragaria x ananassa HOM05D004934 ORTHO05D005924 7.0e-11 71.2 68 63.2
FAN21G3762 Fragaria x ananassa HOM05D004934 ORTHO05D005924 2.6e-10 69.3 76 60.5
Hma1.2p1_0413F.1_g147325 Hydrangea macrophylla HOM05D004934 ORTHO05D005924 3.5e-10 68.9 56 71.4
HPP92_003219 Vanilla planifolia HOM05D004934 ORTHO05D005924 4.5e-10 68.6 69 63.8
Gorai.009G084700 Gossypium raimondii HOM05D004934 ORTHO05D005924 2.2e-09 66.2 70 60.0
Gohir.D05G082900 Gossypium hirsutum HOM05D004934 ORTHO05D005924 8.5e-09 64.3 70 58.6
ECA238G4733 Erigeron canadensis HOM05D004934 ORTHO05D005924 1.1e-08 63.9 105 47.6
Os09g0568900 Oryza sativa ssp. japonica HOM05D004934 ORTHO05D005924 1.5e-08 63.5 69 59.4
Cpa.g.sc32.36 Carica papaya HOM05D004934 ORTHO05D005924 3.2e-08 62.4 56 62.5
Gohir.A05G080000 Gossypium hirsutum HOM05D004934 ORTHO05D005924 5.5e-08 61.6 70 57.1
AagrBONN_evm.TU.Sc2ySwM_228.2259 Anthoceros agrestis HOM05D004934 ORTHO05D005924 1.6e-07 60.1 110 37.3
Cpa.g.sc32.38 Carica papaya HOM05D004934 ORTHO05D005924 3.6e-07 58.9 36 83.3
MELO3C004698.2 Cucumis melo HOM05D004934 ORTHO05D005924 3.0e-06 55.8 86 46.5
SEGI_07969 Sequoiadendron giganteum HOM05D004934 ORTHO05D005924 4.0e-06 55.5 48 64.6
Pp3c14_2790 Physcomitrium patens HOM05D004934 ORTHO05D005924 8.8e-06 54.3 97 43.3


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