Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038208 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.8e-159 565.8 284 100.0
CSS0022173 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.4e-156 556.2 284 97.9
CSS0045394 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.2e-155 553.1 284 97.2
CSS0031004 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 7.9e-155 550.4 284 97.2
CSS0003759 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.8e-154 549.3 284 96.8
CSS0008205 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.0e-141 506.9 280 91.4
CSS0004685 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.9e-141 505.4 280 91.1
CSS0034332 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.8e-141 505.0 280 91.1
CSS0033268 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.4e-140 503.1 280 91.1
CSS0021747 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.5e-140 502.3 280 91.1
CSS0029753 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 5.5e-140 501.1 280 90.7
CSS0047376 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.6e-139 498.0 280 90.0
Rhsim02G0017800 Rhododendron simsii HOM05D007798 ORTHO05D009882 3.5e-54 216.1 290 44.8
Rhsim01G0156700 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.9e-52 210.3 245 46.9
Rhsim11G0007300 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.1e-51 206.8 312 42.3
Rhsim11G0057000 Rhododendron simsii HOM05D007798 ORTHO05D009882 4.8e-51 205.7 258 46.1
Rhsim01G0063300 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.1e-50 204.5 282 40.8
Rhsim03G0060900 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.1e-50 204.5 275 43.3
Rhsim05G0212100 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.4e-47 194.1 200 47.5
Rhsim06G0104000 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.9e-47 193.7 240 47.1
Rhsim05G0032900 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.4e-47 193.4 287 42.5
RhsimUnG0063700 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.6e-46 190.7 281 41.3
Rhsim06G0076200 Rhododendron simsii HOM05D000107 ORTHO05D009882 3.5e-46 189.5 252 42.5
Rhsim06G0120600 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.6e-46 189.1 276 42.8
RhsimUnG0041700 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.0e-45 188.0 253 44.3
CSS0004443 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.3e-44 182.6 137 61.3
CSS0001174 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 5.6e-44 182.2 137 61.3
CSS0001345 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 5.6e-44 182.2 137 61.3
CSS0013307 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 5.6e-44 182.2 137 61.3
CSS0017826 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 5.6e-44 182.2 137 61.3
CSS0026447 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 5.6e-44 182.2 137 61.3
CSS0026772 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 5.6e-44 182.2 137 61.3
CSS0049921 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 5.6e-44 182.2 137 61.3
CSS0003769 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.3e-43 181.0 137 60.6
CSS0047120 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.3e-43 181.0 137 60.6
Rhsim02G0156600 Rhododendron simsii HOM05D007798 ORTHO05D009882 4.0e-42 176.0 149 55.0
Rhsim01G0150700 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.0e-40 171.4 246 40.7
QL05p006610 Quercus lobata HOM05D007798 ORTHO05D009882 2.3e-37 160.2 286 34.6
QL05p078054 Quercus lobata HOM05D007798 ORTHO05D009882 3.9e-37 159.5 279 35.8
QL02p083298 Quercus lobata HOM05D007798 ORTHO05D009882 1.3e-35 154.5 278 34.5
QL05p075545 Quercus lobata HOM05D007798 ORTHO05D009882 1.6e-35 154.1 271 32.8
Actinidia04231 Actinidia chinensis HOM05D007798 ORTHO05D009882 1.1e-34 151.4 294 37.1
Rhsim11G0017600 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.8e-34 150.6 126 57.9
Rhsim11G0005600 Rhododendron simsii HOM05D007798 ORTHO05D009882 9.0e-34 148.3 187 44.9
Rhsim09G0073700 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.6e-33 146.7 232 37.5
Hma1.2p1_0849F.1_g228030 Hydrangea macrophylla HOM05D007798 ORTHO05D009882 1.0e-29 134.8 165 43.6
CSS0011214 Camellia sinensis var. sinensis HOM05D017353 ORTHO05D009882 5.1e-29 132.5 198 43.9
QL04p082690 Quercus lobata HOM05D007798 ORTHO05D009882 5.1e-29 132.5 161 41.0
Actinidia33688 Actinidia chinensis HOM05D007798 ORTHO05D009882 7.4e-28 128.6 115 53.0
Rhsim11G0015900 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.3e-27 127.9 236 34.7
Rhsim05G0057700 Rhododendron simsii HOM05D007798 ORTHO05D009882 6.9e-26 122.1 194 40.2
Rhsim02G0157700 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.4e-25 119.8 214 39.7
Rhsim12G0212200 Rhododendron simsii HOM05D007798 ORTHO05D009882 7.9e-22 108.6 106 46.2
Rhsim09G0076000 Rhododendron simsii HOM05D000107 ORTHO05D000062 8.2e-19 98.6 204 36.3
CSS0044986 Camellia sinensis var. sinensis HOM05D017353 ORTHO05D009882 1.8e-18 97.4 232 35.3
vmacro23182 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 1.8e-18 97.4 273 28.9
Actinidia38754 Actinidia chinensis HOM05D007798 ORTHO05D009882 2.4e-18 97.1 233 32.6
RhsimUnG0235000 Rhododendron simsii HOM05D007798 ORTHO05D009882 5.3e-18 95.9 86 48.8
vmacro17806 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 6.9e-18 95.5 273 29.3
CSS0035454 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D015543 5.9e-17 92.4 188 37.8
Rhsim11G0003100 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.0e-16 91.7 161 40.4
Actinidia07485 Actinidia chinensis HOM05D007798 ORTHO05D009882 2.9e-16 90.1 197 31.0
Rhsim09G0074300 Rhododendron simsii HOM05D000791 ORTHO05D000669 3.8e-16 89.7 272 27.6
Hma1.2p1_0613F.1_g189140 Hydrangea macrophylla HOM05D007798 ORTHO05D009882 1.4e-15 87.8 94 44.7
Actinidia03841 Actinidia chinensis HOM05D007798 ORTHO05D009882 3.2e-15 86.7 92 47.8
vmacro12525 Vaccinium macrocarpon HOM05D007798 ORTHO05D009882 1.6e-14 84.3 230 28.7
Hma1.2p1_0431F.1_g151610 Hydrangea macrophylla HOM05D007798 ORTHO05D009882 3.6e-14 83.2 92 44.6
Rhsim03G0114400 Rhododendron simsii HOM05D007798 ORTHO05D009882 3.6e-14 83.2 151 39.1
QL93p0053_0646 Quercus lobata HOM05D007798 ORTHO05D009882 8.8e-13 78.6 196 29.1
CSS0021921 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.2e-11 73.9 63 55.6
MBI05_g43492_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 4.8e-11 72.8 159 29.6
CSS0029580 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 8.2e-11 72.0 150 29.3
CSS0037861 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 8.2e-11 72.0 150 29.3
CSS0039359 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 8.2e-11 72.0 150 29.3
MBI19_g18856_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.4e-10 71.2 169 27.8
CSS0004734 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.1e-10 70.1 45 68.9
Rhsim09G0047300 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.1e-10 70.1 175 29.1
MBI19_g01025_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 7.0e-10 68.9 172 26.7
MBI07_g22513_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 9.1e-10 68.6 172 26.7
MBI18_g17722_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.6e-09 67.8 138 29.0
MBI19_g27593_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.6e-09 67.8 221 24.0
vmacro00531 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 1.6e-09 67.8 192 26.0
Rhsim10G0126600 Rhododendron simsii HOM05D009565 ORTHO05D012252 2.0e-09 67.4 162 27.8
Rhsim10G0213800 Rhododendron simsii HOM05D008549 ORTHO05D010234 2.6e-09 67.0 161 26.1
Rhsim11G0006000 Rhododendron simsii HOM05D009565 ORTHO05D012252 2.6e-09 67.0 159 27.7
vmacro13454 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 3.5e-09 66.6 178 27.5
Rhsim12G0114600 Rhododendron simsii HOM05D009565 ORTHO05D012252 5.9e-09 65.9 167 31.1
CSS0032723 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.3e-08 64.7 67 50.7
Rhsim03G0038000 Rhododendron simsii HOM05D009565 ORTHO05D012252 1.7e-08 64.3 170 29.4
Rhsim06G0127000 Rhododendron simsii HOM05D009565 ORTHO05D012252 1.7e-08 64.3 160 27.5
MBI12_g43234_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.2e-08 63.9 201 26.4
vmacro12141 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 2.2e-08 63.9 178 28.1
Dinv24767 Davidia involucrata HOM05D000791 ORTHO05D000669 2.9e-08 63.5 179 21.8
Dinv31455 Davidia involucrata HOM05D000791 ORTHO05D000669 2.9e-08 63.5 179 21.8
Migut.O00380 Erythranthe guttata HOM05D023261 ORTHO05D000669 2.9e-08 63.5 159 28.3
MBI18_g19501_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.9e-08 63.5 151 27.8
Rhsim04G0111400 Rhododendron simsii HOM05D009565 ORTHO05D012252 3.8e-08 63.2 161 30.4
MBI02_g29975_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 5.0e-08 62.8 171 25.7
MBI13_g12520_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 6.5e-08 62.4 201 26.9
Migut.B01385 Erythranthe guttata HOM05D023261 ORTHO05D000669 1.1e-07 61.6 174 24.7
Oeu006554.1 Olea europaea HOM05D017951 ORTHO05D020916 1.1e-07 61.6 216 25.5
MBI09_g39165_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.5e-07 61.2 154 27.9
Rhsim09G0060200 Rhododendron simsii HOM05D008549 ORTHO05D010234 1.5e-07 61.2 213 23.9
RcHm_v2.0_Chr1g0346841 Rosa chinensis HOM05D009879 ORTHO05D009647 1.5e-07 61.2 173 27.2
MBI19_g18851_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.9e-07 60.8 169 26.6
Rhsim01G0183600 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.9e-07 60.8 153 30.1
vmacro04245 Vaccinium macrocarpon HOM05D017338 ORTHO05D010234 1.9e-07 60.8 306 24.5
Dinv11320 Davidia involucrata HOM05D000791 ORTHO05D000669 2.5e-07 60.5 180 24.4
RcHm_v2.0_Chr1g0346821 Rosa chinensis HOM05D009879 ORTHO05D009647 3.2e-07 60.1 173 27.2
vmacro07116 Vaccinium macrocarpon HOM05D001028 ORTHO05D000827 5.5e-07 59.3 67 49.3
MBI12_g38023_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 9.4e-07 58.5 133 28.6
Hma1.2p1_0101F.1_g049380 Hydrangea macrophylla HOM05D005507 ORTHO05D009882 1.2e-06 58.2 47 48.9
Dinv01181 Davidia involucrata HOM05D000791 ORTHO05D000669 1.6e-06 57.8 133 22.6
Rhsim07G0158800 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.6e-06 57.8 218 25.2
MBI19_g30599_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.1e-06 57.4 226 25.2
Migut.I00328 Erythranthe guttata HOM05D023261 ORTHO05D000222 2.7e-06 57.0 168 26.2
MBI15_g15098_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.7e-06 57.0 232 24.1
MBI19_g46209_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.7e-06 57.0 161 24.8
MBI15_g13723_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 4.7e-06 56.2 159 26.4
MBI11_g23002_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 6.1e-06 55.8 192 24.0
MBI16_g34343_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 6.1e-06 55.8 166 23.5


User provided reference genes

Program Settings