Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038207 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 3.2e-130 468.4 233 100.0
CSS0037169 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 5.4e-109 397.9 233 87.1
CSS0033607 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 3.3e-98 362.1 226 83.2
CSS0013170 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 2.3e-96 355.9 226 82.3
CSS0012449 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 1.2e-95 353.6 209 86.6
CSS0000878 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 4.6e-92 341.7 209 83.3
CSS0023953 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 1.7e-91 339.7 233 78.5
CSS0046839 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 7.7e-31 138.3 199 42.7
CSS0022166 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.7e-28 129.8 204 43.1
CSS0040223 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.6e-28 129.4 205 42.4
CSS0026441 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.0e-27 126.3 203 39.4
CSS0041497 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.4e-26 122.5 206 41.3
Rhsim13G0163600 Rhododendron simsii HOM05D000004 ORTHO05D000224 9.7e-26 121.3 193 39.4
CSS0046557 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 8.0e-20 101.7 207 36.2
vmacro23521 Vaccinium macrocarpon HOM05D000157 ORTHO05D016144 5.7e-18 95.5 236 33.5
CSS0021557 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.8e-16 90.5 194 37.1
Rhsim05G0110500 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.5e-13 80.9 152 39.5
Rhsim08G0114800 Rhododendron simsii HOM05D000004 ORTHO05D000224 3.2e-13 79.7 152 38.2
PSO832G2906 Papaver somniferum HOM05D000004 ORTHO05D000224 5.5e-13 79.0 154 33.1
PSO063G4683 Papaver somniferum HOM05D000004 ORTHO05D000002 1.6e-12 77.4 149 32.2
PSO017G2690 Papaver somniferum HOM05D000004 ORTHO05D000224 2.1e-12 77.0 149 31.5
PSO210G5577 Papaver somniferum HOM05D000004 ORTHO05D000002 2.1e-12 77.0 149 31.5
PSO210G6640 Papaver somniferum HOM05D000004 ORTHO05D000224 2.1e-12 77.0 149 31.5
PSO384G1551 Papaver somniferum HOM05D000004 ORTHO05D000224 2.1e-12 77.0 149 31.5
Dinv13014 Davidia involucrata HOM05D011494 ORTHO05D016144 2.7e-12 76.6 142 35.9
PSO063G2494 Papaver somniferum HOM05D000004 ORTHO05D000224 3.6e-12 76.3 149 31.5
PSO013G0187 Papaver somniferum HOM05D000004 ORTHO05D000224 4.7e-12 75.9 149 30.9
Rhsim05G0059200 Rhododendron simsii HOM05D011494 ORTHO05D000034 1.0e-11 74.7 176 34.7
PSO591G0107 Papaver somniferum HOM05D000004 ORTHO05D000034 2.3e-11 73.6 149 30.2
PSO384G3678 Papaver somniferum HOM05D000004 ORTHO05D000002 3.0e-11 73.2 191 27.7
Rhsim06G0131400 Rhododendron simsii HOM05D011308 ORTHO05D000224 4.4e-10 69.3 172 29.1
RhsimUnG0193500 Rhododendron simsii HOM05D000004 ORTHO05D000224 1.3e-09 67.8 157 31.8
FvH4_5g25163 Fragaria vesca HOM05D000004 ORTHO05D000224 1.7e-09 67.4 195 27.7
TWI63G0592 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.7e-09 67.4 142 31.0
Rhsim07G0097500 Rhododendron simsii HOM05D000375 ORTHO05D000224 2.2e-09 67.0 160 30.6
Rhsim09G0012700 Rhododendron simsii HOM05D011494 ORTHO05D016144 2.2e-09 67.0 167 34.1
Rhsim07G0098600 Rhododendron simsii HOM05D000375 ORTHO05D000224 4.8e-09 65.9 160 30.0
Rhsim06G0119500 Rhododendron simsii HOM05D011308 ORTHO05D000224 8.2e-09 65.1 185 29.2
Rhsim08G0139100 Rhododendron simsii HOM05D000004 ORTHO05D000224 2.4e-08 63.5 160 30.0
PSO210G2852 Papaver somniferum HOM05D000004 ORTHO05D000224 3.1e-08 63.2 77 41.6
PSO210G6535 Papaver somniferum HOM05D000004 ORTHO05D000224 3.1e-08 63.2 77 40.3
PSO782G2227 Papaver somniferum HOM05D000004 ORTHO05D000034 3.1e-08 63.2 77 40.3
TWI09G0132 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 3.1e-08 63.2 141 29.8
PSO339G4168 Papaver somniferum HOM05D000004 ORTHO05D000224 5.3e-08 62.4 70 41.4
Rhsim05G0131300 Rhododendron simsii HOM05D000995 ORTHO05D000638 9.1e-08 61.6 188 32.4
TWI31G0044 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 9.1e-08 61.6 140 32.1
FvH4_6g27413 Fragaria vesca HOM05D000004 ORTHO05D000224 1.2e-07 61.2 140 32.9
PSO210G4059 Papaver somniferum HOM05D000004 ORTHO05D000224 1.2e-07 61.2 77 39.0
PSO384G2626 Papaver somniferum HOM05D000004 ORTHO05D000034 1.2e-07 61.2 77 40.3
TWI32G0978 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.2e-07 61.2 141 30.5
FvH4_3g35241 Fragaria vesca HOM05D000004 ORTHO05D000002 2.7e-07 60.1 105 32.4
PSO384G2907 Papaver somniferum HOM05D000004 ORTHO05D000224 2.7e-07 60.1 97 36.1
TWI63G1229 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 2.7e-07 60.1 141 29.8
TWI79G1342 Tripterygium wilfordii HOM05D000004 ORTHO05D000034 3.5e-07 59.7 274 25.9
PSO013G0379 Papaver somniferum HOM05D000004 ORTHO05D000224 5.9e-07 58.9 77 37.7
SHI48849 Sapria himalayana HOM05D000004 ORTHO05D000002 5.9e-07 58.9 148 28.4
TWI63G1291 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 5.9e-07 58.9 92 39.1
CSS0000410 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 1.3e-06 57.8 77 40.3
RhsimUnG0175100 Rhododendron simsii HOM05D000004 ORTHO05D000224 1.7e-06 57.4 85 41.2
TWI32G0319 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 2.2e-06 57.0 83 37.3
PSO478G0812 Papaver somniferum HOM05D000004 ORTHO05D000224 2.9e-06 56.6 132 28.8
Rhsim06G0042800 Rhododendron simsii HOM05D000004 ORTHO05D000034 3.8e-06 56.2 76 42.1
RcHm_v2.0_Chr5g0019091 Rosa chinensis HOM05D000004 ORTHO05D000034 5.0e-06 55.8 201 25.4
Actinidia04037 Actinidia chinensis HOM05D000004 ORTHO05D000034 6.5e-06 55.5 139 29.5
CSS0009469 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D000034 6.5e-06 55.5 54 50.0
PSO170G5394 Papaver somniferum HOM05D000004 ORTHO05D000002 6.5e-06 55.5 63 39.7
TWI81G0457 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 6.5e-06 55.5 141 29.1
PSO782G4596 Papaver somniferum HOM05D000004 ORTHO05D000224 8.5e-06 55.1 71 36.6


User provided reference genes

Program Settings