Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038194 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 1.4e-26 122.9 97 100.0
CSS0035081 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 5.8e-25 117.5 57 98.2
CSS0045499 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 2.2e-24 115.5 57 96.5
CSS0010184 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 1.0e-16 90.1 43 97.7
HanXRQChr14g0440231 Helianthus annuus HOM05D005766 ORTHO05D007002 5.9e-09 64.3 38 81.6
Rhsim03G0196600 Rhododendron simsii HOM05D005766 ORTHO05D007002 1.7e-08 62.8 38 78.9
vmacro06594 Vaccinium macrocarpon HOM05D005766 ORTHO05D007002 1.7e-08 62.8 39 79.5
Cc02_g02130 Coffea canephora HOM05D005766 ORTHO05D007002 3.8e-08 61.6 38 81.6
GSVIVG01028775001 Vitis vinifera HOM05D005766 ORTHO05D007002 5.0e-08 61.2 38 76.3
DCAR_008901 Daucus carota HOM05D000149 ORTHO05D000076 8.5e-08 60.5 37 81.1
Dinv28359 Davidia involucrata HOM05D005766 ORTHO05D007002 1.1e-07 60.1 38 76.3
ECA238G0894 Erigeron canadensis HOM05D005766 ORTHO05D000105 2.5e-07 58.9 38 76.3
Sed0015140 Sechium edule HOM05D005766 ORTHO05D007002 2.5e-07 58.9 47 66.0
MD01G1212200 Malus domestica HOM05D005766 ORTHO05D007002 3.2e-07 58.5 38 73.7
Potri.015G026100 Populus trichocarpa HOM05D005766 ORTHO05D007002 3.2e-07 58.5 38 73.7
Haze_00083 Corylus avellana HOM05D005766 ORTHO05D007002 4.2e-07 58.2 51 64.7
Cpa.g.sc3.14 Carica papaya HOM05D005766 ORTHO05D007002 7.2e-07 57.4 38 73.7
MELO3C006963.2 Cucumis melo HOM05D005766 ORTHO05D007002 7.2e-07 57.4 38 76.3
Nn1g01746 Nelumbo nucifera HOM05D005766 ORTHO05D007002 7.2e-07 57.4 38 71.1
Sabra15G0019200 Salix brachista HOM05D005766 ORTHO05D007002 9.3e-07 57.0 38 73.7
Cfa016332 Carpinus fangiana HOM05D005766 ORTHO05D007002 1.2e-06 56.6 38 71.1
Aqoxy5G04049 Aquilegia oxysepala HOM05D005766 ORTHO05D007002 1.6e-06 56.2 38 65.8
Prupe.2G304700 Prunus persica HOM05D005766 ORTHO05D007002 1.6e-06 56.2 38 71.1
FAN03G2278 Fragaria x ananassa HOM05D005766 ORTHO05D007002 2.1e-06 55.8 38 71.1
FAN06G2288 Fragaria x ananassa HOM05D005766 ORTHO05D007002 2.1e-06 55.8 38 71.1
FAN10G0167 Fragaria x ananassa HOM05D005766 ORTHO05D007002 2.1e-06 55.8 38 71.1
FAN10G3945 Fragaria x ananassa HOM05D005766 ORTHO05D007002 2.1e-06 55.8 38 71.1
Hma1.2p1_0327F.1_g126600 Hydrangea macrophylla HOM05D005766 ORTHO05D007002 2.1e-06 55.8 36 75.0
TAR629G2087 Trochodendron aralioides HOM05D005766 ORTHO05D007002 2.1e-06 55.8 38 71.1
ClCG05G008560 Citrullus lanatus HOM05D005766 ORTHO05D007002 2.7e-06 55.5 37 75.7
FvH4_7g30700 Fragaria vesca HOM05D005766 ORTHO05D007002 2.7e-06 55.5 37 73.0
MD07G1282600 Malus domestica HOM05D005766 ORTHO05D007002 2.7e-06 55.5 38 71.1
QL11p056564 Quercus lobata HOM05D005766 ORTHO05D007002 2.7e-06 55.5 37 73.0
CiPaw.05G259700 Carya illinoinensis HOM05D005766 ORTHO05D007002 4.6e-06 54.7 38 71.1
Sopen12g011340 Solanum pennellii HOM05D005766 ORTHO05D007002 4.6e-06 54.7 38 68.4
CANSAT21G0601 Cannabis sativa HOM05D005766 ORTHO05D007002 6.1e-06 54.3 38 71.1
Lsat_1_v5_gn_2_61121 Lactuca sativa HOM05D005766 ORTHO05D007002 6.1e-06 54.3 38 73.7
RcHm_v2.0_Chr1g0379661 Rosa chinensis HOM05D005766 ORTHO05D007002 6.1e-06 54.3 38 71.1
EL10Ac3g05375 Beta vulgaris HOM05D005766 ORTHO05D007002 7.9e-06 53.9 38 65.8
CsaV3_3G021770 Cucumis sativus L. HOM05D005766 ORTHO05D007002 7.9e-06 53.9 38 71.1
Nitab4.5_0014657g0010 Nicotiana tabacum HOM05D005766 ORTHO05D007002 7.9e-06 53.9 38 68.4
QL09p011981 Quercus lobata HOM05D005766 ORTHO05D007002 7.9e-06 53.9 38 71.1


User provided reference genes

Program Settings