Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038144 Camellia sinensis var. sinensis HOM05D001555 ORTHO05D109152 2.6e-87 325.5 179 100.0
CSS0001209 Camellia sinensis var. sinensis HOM05D001555 ORTHO05D001616 9.8e-18 94.4 243 38.7
CSS0010622 Camellia sinensis var. sinensis HOM05D001555 ORTHO05D113255 2.0e-15 86.7 181 42.5
CSS0011140 Camellia sinensis var. sinensis HOM05D001555 ORTHO05D001616 1.3e-14 84.0 306 32.0
Dinv23522 Davidia involucrata HOM05D001555 ORTHO05D001616 1.5e-13 80.5 272 33.1
Actinidia00523 Actinidia chinensis HOM05D001555 ORTHO05D001616 1.2e-12 77.4 157 45.2
GSVIVG01031964001 Vitis vinifera HOM05D001555 ORTHO05D001616 2.1e-12 76.6 309 31.4
Dinv42066 Davidia involucrata HOM05D001555 ORTHO05D001616 2.7e-12 76.3 160 44.4
Cfa005005 Carpinus fangiana HOM05D001555 ORTHO05D001616 1.4e-11 73.9 309 30.7
Manes.17G100900 Manihot esculenta HOM05D001555 ORTHO05D001616 3.0e-11 72.8 308 29.9
Cpa.g.sc62.149 Carica papaya HOM05D001555 ORTHO05D001616 5.2e-11 72.0 158 41.8
Hma1.2p1_0066F.1_g036430 Hydrangea macrophylla HOM05D001555 ORTHO05D001616 7.5e-10 68.2 300 30.0
Hma1.2p1_0203F.1_g086380 Hydrangea macrophylla HOM05D001555 ORTHO05D001616 1.3e-09 67.4 163 42.3
TAR381G1049 Trochodendron aralioides HOM05D001555 ORTHO05D001616 1.3e-09 67.4 167 40.7
Rhsim11G0176900 Rhododendron simsii HOM05D001555 ORTHO05D001616 2.2e-09 66.6 158 41.8
Potri.009G115800 Populus trichocarpa HOM05D001555 ORTHO05D001616 6.3e-09 65.1 166 39.2
Prupe.8G097300 Prunus persica HOM05D001555 ORTHO05D001616 6.3e-09 65.1 166 40.4
Hund06232 Selenicereus undatus HOM05D001555 ORTHO05D001616 8.3e-09 64.7 307 28.7
Thecc.02G085500 Theobroma cacao HOM05D001555 ORTHO05D001616 8.3e-09 64.7 164 40.2
vmacro02109 Vaccinium macrocarpon HOM05D001555 ORTHO05D001616 1.1e-08 64.3 158 40.5
QL02p008540 Quercus lobata HOM05D001555 ORTHO05D001616 1.4e-08 63.9 170 41.2
QL11p043655 Quercus lobata HOM05D001555 ORTHO05D001616 2.4e-08 63.2 308 28.9
TAR376G0116 Trochodendron aralioides HOM05D001555 ORTHO05D001616 3.1e-08 62.8 170 39.4
CiPaw.05G064300 Carya illinoinensis HOM05D001555 ORTHO05D001616 4.1e-08 62.4 167 38.9
Prupe.1G379700 Prunus persica HOM05D001555 ORTHO05D001616 4.1e-08 62.4 171 39.8
CiPaw.16G056000 Carya illinoinensis HOM05D001555 ORTHO05D001616 7.0e-08 61.6 166 39.2
Aqoxy6G01105 Aquilegia oxysepala HOM05D001555 ORTHO05D001616 9.1e-08 61.2 171 39.2
Hund00269 Selenicereus undatus HOM05D001555 ORTHO05D001616 9.1e-08 61.2 308 29.2
Ciclev10001904m.g Citrus clementina HOM05D001555 ORTHO05D001616 1.2e-07 60.8 167 38.9
RcHm_v2.0_Chr6g0301001 Rosa chinensis HOM05D001555 ORTHO05D001616 1.2e-07 60.8 170 38.2
CSS0045078 Camellia sinensis var. sinensis HOM05D001555 ORTHO05D001616 1.6e-07 60.5 164 40.9
Nitab4.5_0005730g0020 Nicotiana tabacum HOM05D001555 ORTHO05D001616 1.6e-07 60.5 168 39.3
Gohir.D13G032800 Gossypium hirsutum HOM05D001555 ORTHO05D001616 2.0e-07 60.1 167 39.5
Gorai.013G037200 Gossypium raimondii HOM05D001555 ORTHO05D001616 2.0e-07 60.1 167 39.5
Thecc.08G026300 Theobroma cacao HOM05D001555 ORTHO05D001616 2.0e-07 60.1 171 39.2
Gohir.A13G034400 Gossypium hirsutum HOM05D001555 ORTHO05D001616 2.7e-07 59.7 167 39.5
Nitab4.5_0002296g0060 Nicotiana tabacum HOM05D001555 ORTHO05D001616 2.7e-07 59.7 168 39.3
Cpa.g.sc36.73 Carica papaya HOM05D001555 ORTHO05D001616 4.5e-07 58.9 146 41.1
COL.COLO4_25929 Corchorus olitorius HOM05D001555 ORTHO05D001616 4.5e-07 58.9 164 38.4
Haze_02383 Corylus avellana HOM05D001555 ORTHO05D001616 4.5e-07 58.9 73 65.8
TWI75G1361 Tripterygium wilfordii HOM05D001555 ORTHO05D001616 4.5e-07 58.9 162 40.1
FAN20G1922 Fragaria x ananassa HOM05D001555 ORTHO05D001616 1.0e-06 57.8 173 37.0
CiPaw.15G077900 Carya illinoinensis HOM05D001555 ORTHO05D001616 1.3e-06 57.4 170 38.2
COL.COLO4_26322 Corchorus olitorius HOM05D001555 ORTHO05D001616 1.3e-06 57.4 171 38.6
FAN15G0075 Fragaria x ananassa HOM05D001555 ORTHO05D001616 1.3e-06 57.4 173 37.0
FAN27G1850 Fragaria x ananassa HOM05D001555 ORTHO05D001616 1.3e-06 57.4 173 37.0
Duzib052G1057 Durio zibethinus HOM05D001555 ORTHO05D001616 1.7e-06 57.0 166 37.3
CAN.G1139.14 Capsicum annuum HOM05D001555 ORTHO05D001616 2.3e-06 56.6 171 38.6
Duzib093G1024 Durio zibethinus HOM05D001555 ORTHO05D001616 2.3e-06 56.6 171 39.2
MD10G1076500 Malus domestica HOM05D001555 ORTHO05D001616 2.3e-06 56.6 166 38.6
Oeu000773.1 Olea europaea HOM05D001555 ORTHO05D001616 2.3e-06 56.6 167 40.1
Oeu000774.1 Olea europaea HOM05D001555 ORTHO05D001616 2.3e-06 56.6 167 40.1
MD15G1028000 Malus domestica HOM05D001555 ORTHO05D001616 2.9e-06 56.2 168 38.7
Manes.18G027300 Manihot esculenta HOM05D001555 ORTHO05D001616 2.9e-06 56.2 166 37.3
Lsat_1_v5_gn_9_109621 Lactuca sativa HOM05D001555 ORTHO05D001616 3.8e-06 55.8 159 38.4
Solyc04g080300.4 Solanum lycopersicum HOM05D001555 ORTHO05D001616 3.8e-06 55.8 164 41.5
Sopen12g031010 Solanum pennellii HOM05D001555 ORTHO05D001616 3.8e-06 55.8 168 39.3
CSS0000270 Camellia sinensis var. sinensis HOM05D001555 ORTHO05D001616 5.0e-06 55.5 162 38.9
CSS0017756 Camellia sinensis var. sinensis HOM05D001555 ORTHO05D001616 5.0e-06 55.5 162 38.9
Ciclev10028884m.g Citrus clementina HOM05D001555 ORTHO05D001616 5.0e-06 55.5 167 35.9
Oeu003719.1 Olea europaea HOM05D001555 ORTHO05D001616 5.0e-06 55.5 164 38.4
PSO541G5052 Papaver somniferum HOM05D001555 ORTHO05D001616 5.0e-06 55.5 170 37.6
TAR628G0872 Trochodendron aralioides HOM05D001555 ORTHO05D001616 5.0e-06 55.5 173 37.6
Gohir.D05G197500 Gossypium hirsutum HOM05D001555 ORTHO05D001616 6.6e-06 55.1 171 37.4
Gorai.009G202400 Gossypium raimondii HOM05D001555 ORTHO05D001616 6.6e-06 55.1 171 37.4
Nitab4.5_0006280g0030 Nicotiana tabacum HOM05D001555 ORTHO05D001616 6.6e-06 55.1 166 39.2
Peaxi162Scf00417g01211 Petunia axillaris HOM05D001555 ORTHO05D001616 6.6e-06 55.1 135 34.1
PGSC0003DMG400015456 Solanum tuberosum HOM05D001555 ORTHO05D001616 6.6e-06 55.1 167 37.7
MD08G1032000 Malus domestica HOM05D001555 ORTHO05D001616 8.6e-06 54.7 168 38.1
Oeu007018.1 Olea europaea HOM05D001555 ORTHO05D001616 8.6e-06 54.7 167 38.3
Solyc12g089140.2 Solanum lycopersicum HOM05D001555 ORTHO05D001616 8.6e-06 54.7 167 38.3


User provided reference genes

Program Settings