Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038127 Camellia sinensis var. sinensis HOM05D003866 ORTHO05D004508 1.2e-124 449.9 230 100.0
CSS0036127 Camellia sinensis var. sinensis HOM05D003866 ORTHO05D004508 5.3e-117 424.5 230 94.8
Rhsim13G0013000 Rhododendron simsii HOM05D003866 ORTHO05D004508 4.5e-108 394.8 230 87.4
vmacro02471 Vaccinium macrocarpon HOM05D003866 ORTHO05D004508 3.2e-106 388.7 230 85.2
RhsimUnG0168700 Rhododendron simsii HOM05D003866 ORTHO05D004508 1.2e-105 386.7 230 85.2
Eucgr.K03458 Eucalyptus grandis HOM05D003866 ORTHO05D004508 7.9e-105 384.0 228 84.6
Dinv33030 Davidia involucrata HOM05D003866 ORTHO05D004508 1.4e-104 383.3 229 83.0
Atru.chr5.1203 Acer truncatum HOM05D003866 ORTHO05D004508 6.7e-104 380.9 230 83.0
Dinv19723 Davidia involucrata HOM05D003866 ORTHO05D004508 6.7e-104 380.9 230 82.6
Actinidia24328 Actinidia chinensis HOM05D003866 ORTHO05D004508 1.1e-103 380.2 230 85.2
CiPaw.08G097800 Carya illinoinensis HOM05D003866 ORTHO05D004508 1.5e-103 379.8 227 83.3
Haze_04883 Corylus avellana HOM05D003866 ORTHO05D004508 1.5e-103 379.8 227 82.8
MD03G1282400 Malus domestica HOM05D003866 ORTHO05D004508 4.3e-103 378.3 230 81.3
Cc01_g20600 Coffea canephora HOM05D003866 ORTHO05D004508 2.2e-102 375.9 230 80.0
Cc01_g06400 Coffea canephora HOM05D003866 ORTHO05D004508 1.1e-101 373.6 230 79.6
Lj2A1190T61 Lonicera japonica HOM05D003866 ORTHO05D004508 1.8e-101 372.9 227 81.1
Lj1A33G82 Lonicera japonica HOM05D003866 ORTHO05D004508 2.4e-101 372.5 227 80.2
Cfa005958 Carpinus fangiana HOM05D003866 ORTHO05D004508 4.1e-101 371.7 227 81.5
MSTRG.18171 Avicennia marina HOM05D003866 ORTHO05D004508 1.2e-100 370.2 230 79.1
Prupe.8G257100 Prunus persica HOM05D003866 ORTHO05D004508 1.5e-100 369.8 227 81.1
DCAR_024209 Daucus carota HOM05D003866 ORTHO05D004508 3.4e-100 368.6 230 81.3
MD11G1303900 Malus domestica HOM05D003866 ORTHO05D004508 7.7e-100 367.5 229 79.0
Potri.010G206900 Populus trichocarpa HOM05D003866 ORTHO05D004508 7.7e-100 367.5 227 80.6
CANSAT25G0267 Cannabis sativa HOM05D003866 ORTHO05D004508 1.0e-99 367.1 229 80.3
GSVIVG01027965001 Vitis vinifera HOM05D003866 ORTHO05D004508 1.0e-99 367.1 227 80.2
CANSAT25G2840 Cannabis sativa HOM05D003866 ORTHO05D004508 3.8e-99 365.2 229 79.9
ECA236G1731 Erigeron canadensis HOM05D003866 ORTHO05D004508 8.5e-99 364.0 229 75.1
RcHm_v2.0_Chr5g0006471 Rosa chinensis HOM05D003866 ORTHO05D004508 8.5e-99 364.0 227 79.3
arahy.Tifrunner.gnm1.ann1.44W6WI Arachis hypogaea HOM05D003866 ORTHO05D004508 1.1e-98 363.6 229 77.7
Lsat_1_v5_gn_8_54720 Lactuca sativa HOM05D003866 ORTHO05D004508 1.4e-98 363.2 227 76.2
HanXRQChr06g0163901 Helianthus annuus HOM05D003866 ORTHO05D004508 2.5e-98 362.5 229 75.1
Lalb_Chr04g0259781 Lupinus albus HOM05D003866 ORTHO05D004508 3.2e-98 362.1 227 78.4
Ca_09142_v3 Cicer arietinum L. HOM05D003866 ORTHO05D004508 5.5e-98 361.3 228 77.6
RcHm_v2.0_Chr6g0293371 Rosa chinensis HOM05D003866 ORTHO05D004508 5.5e-98 361.3 227 79.3
TWI14G1088 Tripterygium wilfordii HOM05D003866 ORTHO05D004508 5.5e-98 361.3 220 81.4
Sopen11g008460 Solanum pennellii HOM05D003866 ORTHO05D004508 7.2e-98 360.9 228 76.3
Oeu024509.1 Olea europaea HOM05D003866 ORTHO05D004508 1.2e-97 360.1 230 75.7
PGSC0003DMG400027789 Solanum tuberosum HOM05D003866 ORTHO05D004508 1.6e-97 359.8 228 76.3
Nitab4.5_0004737g0020 Nicotiana tabacum HOM05D003866 ORTHO05D004508 2.7e-97 359.0 228 75.9
TAR636G2430 Trochodendron aralioides HOM05D003866 ORTHO05D004508 2.7e-97 359.0 226 80.1
Lj1g0017340 Lotus japonicus HOM05D003866 ORTHO05D004508 3.6e-97 358.6 228 77.2
HanXRQChr04g0118161 Helianthus annuus HOM05D003866 ORTHO05D004508 6.1e-97 357.8 229 75.1
Lj1C0G2 Lonicera japonica HOM05D003866 ORTHO05D004508 6.1e-97 357.8 212 83.0
Ciclev10022066m.g Citrus clementina HOM05D003866 ORTHO05D004508 1.8e-96 356.3 227 77.5
Migut.I00105 Erythranthe guttata HOM05D003866 ORTHO05D004508 3.0e-96 355.5 230 74.8
SalBow2G1869 Salvia bowleyana HOM05D003866 ORTHO05D004508 5.1e-96 354.8 230 76.1
Solyc11g013460.2 Solanum lycopersicum HOM05D003866 ORTHO05D004508 5.1e-96 354.8 227 76.2
TAR365G0487 Trochodendron aralioides HOM05D003866 ORTHO05D004508 5.1e-96 354.8 226 79.6
FAN15G0670 Fragaria x ananassa HOM05D003866 ORTHO05D004508 8.8e-96 354.0 227 77.5
FAN11G1587 Fragaria x ananassa HOM05D003866 ORTHO05D004508 2.0e-95 352.8 227 78.0
Nitab4.5_0000051g0210 Nicotiana tabacum HOM05D003866 ORTHO05D004508 2.0e-95 352.8 228 75.4
SGA_v2.0_scaffold1G00383 Striga asiatica HOM05D003866 ORTHO05D004508 3.3e-95 352.1 230 74.3
FvH4_3g05411 Fragaria vesca HOM05D003866 ORTHO05D004508 7.4e-95 350.9 227 77.1
PGR031G3621 Punica granatum HOM05D003866 ORTHO05D004508 9.7e-95 350.5 264 69.7
Sabra08G0038800 Salix brachista HOM05D003866 ORTHO05D004508 9.7e-95 350.5 229 78.2
FvH4_2g25231 Fragaria vesca HOM05D003866 ORTHO05D004508 1.3e-94 350.1 227 76.7
Aqoxy5G00709 Aquilegia oxysepala HOM05D003866 ORTHO05D004508 2.2e-94 349.4 226 77.0
FvH4_7g06070 Fragaria vesca HOM05D003866 ORTHO05D004508 2.2e-94 349.4 227 76.7
Glyma.03G212300 Glycine max HOM05D003866 ORTHO05D004508 3.7e-94 348.6 228 74.6
Glyma.19G209400 Glycine max HOM05D003866 ORTHO05D004508 4.8e-94 348.2 227 75.3
RcHm_v2.0_Chr7g0221651 Rosa chinensis HOM05D003866 ORTHO05D004508 4.8e-94 348.2 227 75.3
Manes.12G006300 Manihot esculenta HOM05D003866 ORTHO05D004508 6.3e-94 347.8 224 79.0
Peaxi162Scf00140g01011 Petunia axillaris HOM05D003866 ORTHO05D004508 8.2e-94 347.4 227 73.6
arahy.Tifrunner.gnm1.ann1.AT77GA Arachis hypogaea HOM05D003866 ORTHO05D004508 2.4e-93 345.9 229 74.7
TAR365G0990 Trochodendron aralioides HOM05D003866 ORTHO05D004508 2.4e-93 345.9 219 79.9
Cpa.g.sc11.50 Carica papaya HOM05D003866 ORTHO05D004508 3.1e-93 345.5 227 75.3
TPR.G9596 Trifolium pratense HOM05D003866 ORTHO05D004508 3.1e-93 345.5 228 74.1
Manes.13G006100 Manihot esculenta HOM05D003866 ORTHO05D004508 4.1e-93 345.1 226 76.5
Medtr2g014120 Medicago truncatula HOM05D003866 ORTHO05D004508 5.3e-93 344.7 227 74.4
Medtr7g108540 Medicago truncatula HOM05D003866 ORTHO05D004508 5.3e-93 344.7 227 74.4
Psat3g022720 Pisum sativum HOM05D003866 ORTHO05D004508 5.3e-93 344.7 228 74.6
CAN.G337.118 Capsicum annuum HOM05D003866 ORTHO05D004508 9.1e-93 344.0 228 73.2
CsaV3_4G000530 Cucumis sativus L. HOM05D003866 ORTHO05D004508 9.1e-93 344.0 227 74.0
MBI19_g41921_MAGBIO Magnolia biondii HOM05D003866 ORTHO05D004508 9.1e-93 344.0 226 74.3
Nn4g25882 Nelumbo nucifera HOM05D003866 ORTHO05D004508 9.1e-93 344.0 229 74.7
VMungo1383G2803 Vigna mungo HOM05D003866 ORTHO05D004508 1.5e-92 343.2 229 74.2
Hund18125 Selenicereus undatus HOM05D003866 ORTHO05D004508 1.0e-91 340.5 227 75.3
EL10Ac4g07959 Beta vulgaris HOM05D003866 ORTHO05D004508 1.7e-91 339.7 227 75.3
Phvul.001G205200 Phaseolus vulgaris HOM05D003866 ORTHO05D004508 1.7e-91 339.7 228 72.4
FAN27G2002 Fragaria x ananassa HOM05D003866 ORTHO05D004508 2.2e-91 339.3 227 75.3
unitig_8.g3710 Utricularia gibba HOM05D003866 ORTHO05D004508 2.2e-91 339.3 230 71.7
PGSC0003DMG400027790 Solanum tuberosum HOM05D003866 ORTHO05D004508 5.0e-91 338.2 228 72.4
COL.COLO4_23391 Corchorus olitorius HOM05D003866 ORTHO05D004508 2.5e-90 335.9 227 75.3
PSO832G2724 Papaver somniferum HOM05D003866 ORTHO05D004508 2.5e-90 335.9 227 75.8
Sed0016300 Sechium edule HOM05D003866 ORTHO05D004508 2.5e-90 335.9 227 72.2
Gohir.D12G010300 Gossypium hirsutum HOM05D003866 ORTHO05D004508 2.1e-89 332.8 223 75.8
Gorai.008G010300 Gossypium raimondii HOM05D003866 ORTHO05D004508 2.1e-89 332.8 227 74.4
PSO210G0692 Papaver somniferum HOM05D003866 ORTHO05D004508 2.7e-89 332.4 227 75.8
AUR62022186 Chenopodium quinoa HOM05D003866 ORTHO05D004508 3.6e-89 332.0 226 74.8
Prupe.6G179600 Prunus persica HOM05D003866 ORTHO05D004508 6.1e-89 331.3 224 70.5
Duzib133G0502 Durio zibethinus HOM05D003866 ORTHO05D004508 8.0e-89 330.9 223 74.9
Gohir.A12G010200 Gossypium hirsutum HOM05D003866 ORTHO05D004508 8.0e-89 330.9 227 73.1
Gohir.D04G003400 Gossypium hirsutum HOM05D003866 ORTHO05D004508 1.0e-88 330.5 227 74.0
Gorai.012G004500 Gossypium raimondii HOM05D003866 ORTHO05D004508 2.3e-88 329.3 227 73.6
AT2G27490 Arabidopsis thaliana HOM05D003866 ORTHO05D004508 3.9e-88 328.6 227 70.5
FAN24G3471 Fragaria x ananassa HOM05D003866 ORTHO05D004508 8.8e-88 327.4 202 80.2
AUR62031891 Chenopodium quinoa HOM05D003866 ORTHO05D004508 2.6e-87 325.9 226 73.9
AL4G21480 Arabidopsis lyrata HOM05D003866 ORTHO05D004508 5.7e-87 324.7 227 70.5
Thhalv10017203m.g Eutrema salsugineum HOM05D003866 ORTHO05D004508 2.8e-86 322.4 227 70.5
Aa31LG5G8830 Aethionema arabicum HOM05D003866 ORTHO05D004508 5.3e-85 318.2 229 69.4
BcaB01g03075 Brassica carinata HOM05D003866 ORTHO05D004508 7.0e-85 317.8 226 69.5
BolC3t15527H Brassica oleracea HOM05D003866 ORTHO05D004508 9.1e-85 317.4 227 69.2
Os01g0360600 Oryza sativa ssp. japonica HOM05D003866 ORTHO05D004508 9.1e-85 317.4 229 67.7
A03p26580 Brassica napus HOM05D003866 ORTHO05D004508 1.2e-84 317.0 227 69.2
BcaC01g04944 Brassica carinata HOM05D003866 ORTHO05D004508 2.0e-84 316.2 227 69.2
ATR0706G042 Amborella trichopoda HOM05D003866 ORTHO05D004508 2.6e-84 315.8 226 69.5
C03p31840 Brassica napus HOM05D003866 ORTHO05D004508 2.6e-84 315.8 227 68.7
BraA03t11870Z Brassica rapa HOM05D003866 ORTHO05D004508 3.5e-84 315.5 227 69.2
FAN10G2101 Fragaria x ananassa HOM05D003866 ORTHO05D004508 4.5e-84 315.1 227 71.4
CARHR120140 Cardamine hirsuta HOM05D003866 ORTHO05D004508 1.0e-83 313.9 227 69.2
Sp4g10360 Schrenkiella parvula HOM05D003866 ORTHO05D004508 1.3e-83 313.5 227 68.3
A07p18280 Brassica napus HOM05D003866 ORTHO05D004508 3.8e-83 312.0 226 68.1
Thhalv10017190m.g Eutrema salsugineum HOM05D003866 ORTHO05D004508 1.1e-82 310.5 227 67.8
ClCG10G010790 Citrullus lanatus HOM05D003866 ORTHO05D004508 3.2e-82 308.9 309 54.4
arahy.Tifrunner.gnm1.ann1.9DBC1D Arachis hypogaea HOM05D003866 ORTHO05D004508 4.2e-82 308.5 232 68.5
Sc03g0003200 Simmondsia chinensis HOM05D006805 ORTHO05D004508 3.6e-81 305.4 195 79.5
Actinidia32233 Actinidia chinensis HOM05D003866 ORTHO05D004508 4.7e-81 305.1 180 86.7
RcHm_v2.0_Chr1g0333581 Rosa chinensis HOM05D003866 ORTHO05D004508 6.1e-81 304.7 230 69.1
Thecc.01G295900 Theobroma cacao HOM05D003866 ORTHO05D004508 1.0e-80 303.9 210 72.4
Carub.0004s0812 Capsella rubella HOM05D003866 ORTHO05D004508 5.2e-80 301.6 204 73.0
Sp4g10280 Schrenkiella parvula HOM05D003866 ORTHO05D004508 1.2e-79 300.4 226 65.9
CDE09G0414 Ceratophyllum demersum HOM05D003866 ORTHO05D004508 1.5e-79 300.1 221 68.3
Sabra10G0159700 Salix brachista HOM05D003866 ORTHO05D002218 1.5e-79 300.1 188 78.7
Zm00001eb041190 Zea mays HOM05D003866 ORTHO05D004508 9.7e-79 297.4 229 62.9
Gohir.A05G412600 Gossypium hirsutum HOM05D003866 ORTHO05D004508 1.2e-76 290.4 202 73.3
Hund18126 Selenicereus undatus HOM05D003866 ORTHO05D004508 6.5e-75 284.6 197 71.1
SEGI_05441 Sequoiadendron giganteum HOM05D003866 ORTHO05D004508 6.5e-75 284.6 212 67.5
BcaB02g10095 Brassica carinata HOM05D003866 ORTHO05D004508 5.5e-74 281.6 229 62.9
RcHm_v2.0_Chr1g0334201 Rosa chinensis HOM05D003866 ORTHO05D004508 2.5e-66 256.1 152 82.2
AL8G17300 Arabidopsis lyrata HOM05D003866 ORTHO05D004508 8.9e-64 247.7 237 57.0
SGA_v2.0_scaffold25G10945 Striga asiatica HOM05D003866 ORTHO05D004508 6.3e-62 241.5 182 66.5
Potri.008G053601 Populus trichocarpa HOM05D003866 ORTHO05D004508 1.1e-61 240.7 133 89.5
Pp3c2_13260 Physcomitrium patens HOM05D003866 ORTHO05D004508 2.4e-61 239.6 222 55.4
Nn4g25856 Nelumbo nucifera HOM05D003866 ORTHO05D004508 2.0e-60 236.5 213 60.6
FAN25G0878 Fragaria x ananassa HOM05D003866 ORTHO05D004508 1.0e-59 234.2 144 79.9
Mapoly0028s0053 Marchantia polymorpha HOM05D003866 ORTHO05D004508 1.0e-59 234.2 212 56.6
AagrBONN_evm.TU.Sc2ySwM_228.2237 Anthoceros agrestis HOM05D003866 ORTHO05D004508 2.3e-56 223.0 209 51.7
FAN20G0831 Fragaria x ananassa HOM05D003866 ORTHO05D004508 5.8e-55 218.4 124 86.3
SMO144G0118 Selaginella moellendorffii HOM05D003866 ORTHO05D004508 1.7e-54 216.9 218 52.3
MD12G1063200 Malus domestica HOM05D003866 ORTHO05D004508 4.1e-53 212.2 152 70.4
EL10Ac1g00209 Beta vulgaris HOM05D003866 ORTHO05D004508 4.7e-49 198.7 140 71.4
Sc03g0003210 Simmondsia chinensis HOM05D003866 ORTHO05D004508 9.8e-47 191.0 142 69.7
RcHm_v2.0_Chr1g0333491 Rosa chinensis HOM05D003866 ORTHO05D004508 1.3e-46 190.7 119 75.6
Carub.0001s3498 Capsella rubella HOM05D003866 ORTHO05D004508 4.6e-44 182.2 131 69.5
arahy.Tifrunner.gnm1.ann1.ZE4P1V Arachis hypogaea HOM05D003866 ORTHO05D004508 1.0e-43 181.0 147 62.6
BcaC02g10889 Brassica carinata HOM05D003866 ORTHO05D004508 1.3e-43 180.6 140 61.4
SHI02446 Sapria himalayana HOM05D003866 ORTHO05D004508 8.6e-43 177.9 135 67.4
Cre10.g436150 Chlamydomonas reinhardtii HOM05D003866 ORTHO05D004508 1.1e-40 171.0 191 48.2
Zm00001eb341290 Zea mays HOM05D003866 ORTHO05D004508 6.8e-40 168.3 144 56.9
RcHm_v2.0_Chr4g0419041 Rosa chinensis HOM05D003866 ORTHO05D004508 3.7e-38 162.5 126 65.9
CBR_g9110 Chara braunii HOM05D003958 ORTHO05D004864 5.4e-37 158.7 185 45.4
arahy.Tifrunner.gnm1.ann1.86SF76 Arachis hypogaea HOM05D003866 ORTHO05D004508 1.2e-36 157.5 138 57.2
GSVIVG01010954001 Vitis vinifera HOM05D003866 ORTHO05D004508 7.3e-34 148.3 83 85.5
QL12p026964 Quercus lobata HOM05D003866 ORTHO05D004508 9.5e-34 147.9 85 83.5
Oeu047454.1 Olea europaea HOM05D003866 ORTHO05D004508 6.2e-33 145.2 97 73.2
HPP92_010697 Vanilla planifolia HOM05D001483 ORTHO05D001463 4.0e-32 142.5 197 44.7
BolC4t23901H Brassica oleracea HOM05D003866 ORTHO05D004508 1.2e-31 141.0 109 67.0
Psat5g098240 Pisum sativum HOM05D001063 ORTHO05D000986 1.7e-30 137.1 124 58.9
BraA07t29544Z Brassica rapa HOM05D003866 ORTHO05D004508 1.9e-29 133.7 102 67.6
MSTRG.21619 Avicennia marina HOM05D003866 ORTHO05D004508 3.2e-29 132.9 91 72.5
arahy.Tifrunner.gnm1.ann1.VNWS1A Arachis hypogaea HOM05D003866 ORTHO05D004508 2.1e-28 130.2 108 61.1
CAN.G174.11 Capsicum annuum HOM05D003866 ORTHO05D004508 1.3e-27 127.5 85 75.3
ClCG10G010800 Citrullus lanatus HOM05D003866 ORTHO05D004508 1.9e-26 123.6 85 69.4
BcaC02g10888 Brassica carinata HOM05D003866 ORTHO05D004508 2.5e-26 123.2 82 75.6
FvH4_3g05410 Fragaria vesca HOM05D003866 ORTHO05D004508 2.5e-26 123.2 79 75.9
C04p24060 Brassica napus HOM05D003866 ORTHO05D004508 4.8e-25 119.0 95 66.3
CAN.G255.6 Capsicum annuum HOM05D003866 ORTHO05D004508 8.1e-25 118.2 77 76.6
QL12p026975 Quercus lobata HOM05D003866 ORTHO05D004508 8.1e-25 118.2 69 84.1
CAN.G255.7 Capsicum annuum HOM05D003866 ORTHO05D004508 6.9e-24 115.2 99 60.6
SEGI_13628 Sequoiadendron giganteum HOM05D003866 ORTHO05D004508 1.2e-23 114.4 85 68.2
RcHm_v2.0_Chr6g0258301 Rosa chinensis HOM05D003866 ORTHO05D004508 1.5e-23 114.0 147 46.9
FAN06G0461 Fragaria x ananassa HOM05D003866 ORTHO05D004508 1.7e-22 110.5 85 65.9
DCAR_024210 Daucus carota HOM05D003866 ORTHO05D004508 5.1e-19 99.0 61 78.7
MD14G1128400 Malus domestica HOM05D003866 ORTHO05D004508 1.3e-17 94.4 51 88.2
RcHm_v2.0_Chr4g0419031 Rosa chinensis HOM05D003866 ORTHO05D004508 1.1e-16 91.3 84 58.3
arahy.Tifrunner.gnm1.ann1.TVUZ4W Arachis hypogaea HOM05D003866 ORTHO05D004508 1.8e-16 90.5 102 50.0
ClCG10G010610 Citrullus lanatus HOM05D003866 ORTHO05D004508 1.4e-13 80.9 70 58.6
MCO11G607 Micromonas commoda HOM05D003866 ORTHO05D004508 3.2e-13 79.7 220 29.5
PRCOL_00003268 Prasinoderma coloniale HOM05D003001 ORTHO05D003494 4.2e-13 79.3 173 29.5
RcHm_v2.0_Chr1g0333451 Rosa chinensis HOM05D003866 ORTHO05D004508 2.3e-11 73.6 60 60.0
HanXRQChr04g0118191 Helianthus annuus HOM05D003866 ORTHO05D004508 6.7e-11 72.0 67 55.2
SHI02445 Sapria himalayana HOM05D003866 ORTHO05D004508 6.7e-11 72.0 49 67.3
Cre13.g586250 Chlamydomonas reinhardtii HOM05D003866 ORTHO05D004508 1.4e-08 64.3 187 27.8


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