Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012878 Camellia sinensis var. sinensis HOM05D006729 ORTHO05D008502 3.3e-90 335.1 180 100.0
CSS0038118 Camellia sinensis var. sinensis HOM05D006729 ORTHO05D008502 3.3e-90 335.1 180 100.0
Actinidia06196 Actinidia chinensis HOM05D006729 ORTHO05D008502 2.7e-60 235.7 158 82.9
Nn2g14459 Nelumbo nucifera HOM05D006729 ORTHO05D008502 1.0e-59 233.8 158 81.0
Actinidia07956 Actinidia chinensis HOM05D006729 ORTHO05D008502 2.3e-59 232.6 158 81.0
Dinv25092 Davidia involucrata HOM05D006729 ORTHO05D008502 4.8e-57 224.9 158 79.7
Cpa.g.sc85.5 Carica papaya HOM05D006729 ORTHO05D008502 8.2e-57 224.2 159 77.4
Hma1.2p1_0304F.1_g119210 Hydrangea macrophylla HOM05D006729 ORTHO05D008502 8.2e-57 224.2 158 77.8
Rhsim04G0130300 Rhododendron simsii HOM05D006729 ORTHO05D008502 8.2e-57 224.2 158 78.5
Hma1.2p1_0304F.1_g119200 Hydrangea macrophylla HOM05D006729 ORTHO05D008502 1.1e-56 223.8 157 78.3
Gohir.A09G131400 Gossypium hirsutum HOM05D006729 ORTHO05D008502 1.4e-56 223.4 157 77.1
Gohir.D09G127700 Gossypium hirsutum HOM05D006729 ORTHO05D008502 1.4e-56 223.4 157 77.1
Atru.BG.227.p Acer truncatum HOM05D006729 ORTHO05D008502 1.8e-56 223.0 158 75.9
Cc06_g07110 Coffea canephora HOM05D006729 ORTHO05D008502 2.4e-56 222.6 158 75.9
Gorai.006G146200 Gossypium raimondii HOM05D006729 ORTHO05D008502 2.4e-56 222.6 157 76.4
CiPaw.09G025400 Carya illinoinensis HOM05D006729 ORTHO05D008502 3.1e-56 222.2 159 76.1
GSVIVG01022493001 Vitis vinifera HOM05D006729 ORTHO05D008502 3.1e-56 222.2 159 76.7
Aqoxy1G00566 Aquilegia oxysepala HOM05D006729 ORTHO05D008502 5.3e-56 221.5 158 74.7
Haze_20087 Corylus avellana HOM05D006729 ORTHO05D008502 5.3e-56 221.5 159 76.7
FvH4_6g21260 Fragaria vesca HOM05D006729 ORTHO05D008502 1.5e-55 219.9 158 75.3
FAN14G3257 Fragaria x ananassa HOM05D006729 ORTHO05D008502 1.5e-55 219.9 158 75.3
Thecc.05G181500 Theobroma cacao HOM05D006729 ORTHO05D008502 1.5e-55 219.9 157 77.7
QL07p025843 Quercus lobata HOM05D006729 ORTHO05D008502 2.6e-55 219.2 159 74.2
Sc01g0005190 Simmondsia chinensis HOM05D006729 ORTHO05D008502 2.6e-55 219.2 158 75.9
Potri.006G197900 Populus trichocarpa HOM05D006729 ORTHO05D008502 4.5e-55 218.4 159 74.2
TAR623G1267 Trochodendron aralioides HOM05D006729 ORTHO05D008502 5.9e-55 218.0 158 76.6
Glyma.19G204000 Glycine max HOM05D006729 ORTHO05D008502 7.7e-55 217.6 159 76.1
FAN05G4950 Fragaria x ananassa HOM05D006729 ORTHO05D008502 1.3e-54 216.9 158 73.4
Oeu044686.1 Olea europaea HOM05D006729 ORTHO05D008502 1.3e-54 216.9 159 73.6
VMungo1383G1163 Vigna mungo HOM05D006729 ORTHO05D008502 1.3e-54 216.9 158 76.6
EL10Ac5g11780 Beta vulgaris HOM05D006729 ORTHO05D008502 1.7e-54 216.5 158 72.8
Duzib093G0804 Durio zibethinus HOM05D006729 ORTHO05D008502 1.7e-54 216.5 157 76.4
RcHm_v2.0_Chr3g0477721 Rosa chinensis HOM05D006729 ORTHO05D008502 1.7e-54 216.5 158 74.7
Glyma.03G206200 Glycine max HOM05D006729 ORTHO05D008502 2.2e-54 216.1 159 75.5
Sabra06G0152300 Salix brachista HOM05D006729 ORTHO05D008502 3.8e-54 215.3 159 74.2
Lj1g0010305 Lotus japonicus HOM05D006729 ORTHO05D008502 5.0e-54 214.9 159 75.5
THA.LOC104802817 Tarenaya hassleriana HOM05D006729 ORTHO05D008502 5.0e-54 214.9 159 71.1
Lalb_Chr20g0111151 Lupinus albus HOM05D006729 ORTHO05D008502 6.5e-54 214.5 159 73.6
CDE10G0526 Ceratophyllum demersum HOM05D006729 ORTHO05D008502 8.5e-54 214.2 158 74.1
Manes.08G038800 Manihot esculenta HOM05D006729 ORTHO05D008502 1.1e-53 213.8 159 73.6
Phvul.001G199900 Phaseolus vulgaris HOM05D006729 ORTHO05D008502 1.1e-53 213.8 159 75.5
COL.COLO4_29456 Corchorus olitorius HOM05D006729 ORTHO05D008502 1.4e-53 213.4 156 75.6
HanXRQChr01g0026291 Helianthus annuus HOM05D006729 ORTHO05D008502 1.4e-53 213.4 158 71.5
MD12G1049100 Malus domestica HOM05D006729 ORTHO05D008502 1.4e-53 213.4 155 76.1
TWI53G1785 Tripterygium wilfordii HOM05D006729 ORTHO05D008502 1.4e-53 213.4 158 74.7
CiPaw.10G022200 Carya illinoinensis HOM05D006729 ORTHO05D008502 2.5e-53 212.6 159 72.3
Ca_09095_v3 Cicer arietinum L. HOM05D006729 ORTHO05D008502 2.5e-53 212.6 159 74.2
Lsat_1_v5_gn_1_56360 Lactuca sativa HOM05D006729 ORTHO05D008502 2.5e-53 212.6 158 70.9
TPR.G32290 Trifolium pratense HOM05D006729 ORTHO05D008502 3.2e-53 212.2 159 75.5
ECA248G1919 Erigeron canadensis HOM05D006729 ORTHO05D008502 5.5e-53 211.5 157 71.3
HPP92_017665 Vanilla planifolia HOM05D006729 ORTHO05D008502 7.2e-53 211.1 157 72.0
Solyc10g081600.2 Solanum lycopersicum HOM05D006729 ORTHO05D008502 9.4e-53 210.7 158 73.4
Sopen10g032110 Solanum pennellii HOM05D006729 ORTHO05D008502 9.4e-53 210.7 158 73.4
SGA_v2.0_scaffold392G50667 Striga asiatica HOM05D006729 ORTHO05D008502 9.4e-53 210.7 158 71.5
Prupe.7G087100 Prunus persica HOM05D006729 ORTHO05D008502 1.2e-52 210.3 158 73.4
AL5G40220 Arabidopsis lyrata HOM05D006729 ORTHO05D008502 1.6e-52 209.9 159 69.8
AT3G58460 Arabidopsis thaliana HOM05D006729 ORTHO05D008502 1.6e-52 209.9 159 69.2
BolC8t50983H Brassica oleracea HOM05D006729 ORTHO05D008502 1.6e-52 209.9 157 70.7
CAN.G128.158 Capsicum annuum HOM05D006729 ORTHO05D008502 1.6e-52 209.9 158 72.8
CARHR168850 Cardamine hirsuta HOM05D006729 ORTHO05D008502 2.1e-52 209.5 159 69.8
Sp5g04420 Schrenkiella parvula HOM05D006729 ORTHO05D008502 2.7e-52 209.1 159 69.8
Nitab4.5_0008653g0030 Nicotiana tabacum HOM05D006729 ORTHO05D008502 3.6e-52 208.8 158 74.7
A09p51030 Brassica napus HOM05D006729 ORTHO05D008502 4.7e-52 208.4 157 70.1
AUR62038406 Chenopodium quinoa HOM05D006729 ORTHO05D008502 6.1e-52 208.0 158 69.6
BcaC07g40202 Brassica carinata HOM05D006729 ORTHO05D008502 7.9e-52 207.6 157 69.4
Psat0s2632g0080 Pisum sativum HOM05D006729 ORTHO05D008502 7.9e-52 207.6 159 72.3
C08p33850 Brassica napus HOM05D006729 ORTHO05D008502 1.0e-51 207.2 157 69.4
BraA09t40548Z Brassica rapa HOM05D006729 ORTHO05D008502 1.0e-51 207.2 157 69.4
AUR62036295 Chenopodium quinoa HOM05D006729 ORTHO05D008502 1.0e-51 207.2 158 69.6
Migut.L01859 Erythranthe guttata HOM05D006729 ORTHO05D008502 1.0e-51 207.2 158 71.5
PGSC0003DMG400028130 Solanum tuberosum HOM05D006729 ORTHO05D008502 1.0e-51 207.2 158 72.8
Aa31LG10G13030 Aethionema arabicum HOM05D006729 ORTHO05D008502 1.4e-51 206.8 159 68.6
Eucgr.K01887 Eucalyptus grandis HOM05D006729 ORTHO05D008502 1.4e-51 206.8 168 69.0
FAN05G4583 Fragaria x ananassa HOM05D006729 ORTHO05D008502 1.8e-51 206.5 158 70.3
Thhalv10006012m.g Eutrema salsugineum HOM05D006729 ORTHO05D008502 2.3e-51 206.1 159 69.2
FAN02G0869 Fragaria x ananassa HOM05D006729 ORTHO05D008502 2.3e-51 206.1 158 70.9
DCAR_013470 Daucus carota HOM05D006729 ORTHO05D008502 3.0e-51 205.7 158 70.9
PGR142G3090 Punica granatum HOM05D006729 ORTHO05D008502 3.0e-51 205.7 158 70.9
Medtr7g107390 Medicago truncatula HOM05D006729 ORTHO05D008502 3.9e-51 205.3 159 72.3
BcaC07g40257 Brassica carinata HOM05D006729 ORTHO05D008502 5.2e-51 204.9 157 68.8
arahy.Tifrunner.gnm1.ann1.B8V3X4 Arachis hypogaea HOM05D006729 ORTHO05D008502 6.7e-51 204.5 159 71.1
arahy.Tifrunner.gnm1.ann1.Z8UC8R Arachis hypogaea HOM05D006729 ORTHO05D008502 6.7e-51 204.5 159 71.1
Carub.0005s2520 Capsella rubella HOM05D006729 ORTHO05D008502 6.7e-51 204.5 159 67.9
Lalb_Chr25g0287741 Lupinus albus HOM05D006729 ORTHO05D008502 8.8e-51 204.1 158 70.9
Sed0008871 Sechium edule HOM05D006729 ORTHO05D008502 1.5e-50 203.4 159 69.2
ATR0697G123 Amborella trichopoda HOM05D006729 ORTHO05D008502 2.6e-50 202.6 159 68.6
MSTRG.26567 Avicennia marina HOM05D006729 ORTHO05D008502 2.6e-50 202.6 158 71.5
Peaxi162Scf00060g01414 Petunia axillaris HOM05D006729 ORTHO05D008502 5.7e-50 201.4 158 70.3
MBI05_g37660_MAGBIO Magnolia biondii HOM05D006729 ORTHO05D008502 9.7e-50 200.7 158 70.3
CsaV3_4G013460 Cucumis sativus L. HOM05D006729 ORTHO05D008502 2.2e-49 199.5 159 67.9
MELO3C008786.2 Cucumis melo HOM05D006729 ORTHO05D008502 3.7e-49 198.7 159 67.9
PSO339G2226 Papaver somniferum HOM05D006729 ORTHO05D008502 1.8e-48 196.4 159 69.8
Hund15041 Selenicereus undatus HOM05D006729 ORTHO05D008502 2.4e-48 196.1 159 68.6
Ciclev10011870m.g Citrus clementina HOM05D006729 ORTHO05D008502 4.1e-48 195.3 158 69.0
Zm00001eb052940 Zea mays HOM05D006729 ORTHO05D008502 9.1e-48 194.1 158 67.1
PSO384G1090 Papaver somniferum HOM05D006729 ORTHO05D008502 1.2e-47 193.7 159 69.8
ClCG04G005160 Citrullus lanatus HOM05D006729 ORTHO05D008502 2.2e-46 189.5 159 64.8
unitig_746.g26785 Utricularia gibba HOM05D006729 ORTHO05D008502 8.5e-46 187.6 158 62.7
vmacro08860 Vaccinium macrocarpon HOM05D006729 ORTHO05D008502 2.1e-44 183.0 132 78.0
Atru.chr8.1243 Acer truncatum HOM05D006729 ORTHO05D008502 1.4e-43 180.3 151 68.9
Hma1.2p1_0127F.1_g059610 Hydrangea macrophylla HOM05D006729 ORTHO05D008502 5.2e-43 178.3 143 69.9
SEGI_10602 Sequoiadendron giganteum HOM05D006729 ORTHO05D008502 4.4e-42 175.3 157 60.5
Os03g0651100 Oryza sativa ssp. japonica HOM05D006729 ORTHO05D008502 5.0e-38 161.8 137 64.2
SMO364G0815 Selaginella moellendorffii HOM05D006729 ORTHO05D008502 1.5e-37 160.2 157 57.3
Pp3c8_11670 Physcomitrium patens HOM05D006729 ORTHO05D008502 3.0e-35 152.5 152 55.3
CDE07G1895 Ceratophyllum demersum HOM05D006729 ORTHO05D008502 7.5e-34 147.9 113 71.7
Mapoly0022s0048 Marchantia polymorpha HOM05D006729 ORTHO05D008502 9.8e-34 147.5 157 54.1
AagrBONN_evm.TU.Sc2ySwM_228.4371 Anthoceros agrestis HOM05D006729 ORTHO05D008502 1.6e-31 140.2 157 47.1
CBR_g26284 Chara braunii HOM05D006729 ORTHO05D008502 1.3e-25 120.6 153 47.1
MCO15G048 Micromonas commoda HOM05D006729 ORTHO05D008502 1.8e-16 90.1 159 38.4
Lj2g0026947 Lotus japonicus HOM05D006729 ORTHO05D008502 2.4e-16 89.7 100 58.0
Cre01.g050350 Chlamydomonas reinhardtii HOM05D006729 ORTHO05D008502 3.9e-14 82.4 136 35.3
PRCOL_00006238 Prasinoderma coloniale HOM05D006729 ORTHO05D008502 2.0e-07 60.1 160 29.4
SEGI_40739 Sequoiadendron giganteum HOM05D005353 ORTHO05D006248 2.7e-07 59.7 136 34.6
SalBow7G1146 Salvia bowleyana HOM05D005353 ORTHO05D006248 7.8e-07 58.2 137 40.1
Ciclev10021112m.g Citrus clementina HOM05D005353 ORTHO05D006248 1.3e-06 57.4 135 38.5
Lalb_Chr12g0200451 Lupinus albus HOM05D005353 ORTHO05D006248 2.3e-06 56.6 135 38.5
PSO761G0146 Papaver somniferum HOM05D005353 ORTHO05D006248 2.3e-06 56.6 134 38.1
Solyc07g042930.3 Solanum lycopersicum HOM05D005353 ORTHO05D006248 2.3e-06 56.6 135 38.5
Carub.0003s1733 Capsella rubella HOM05D005353 ORTHO05D006248 3.0e-06 56.2 134 35.8
Peaxi162Scf01347g00135 Petunia axillaris HOM05D005353 ORTHO05D006248 3.9e-06 55.8 135 37.8
PSO210G1641 Papaver somniferum HOM05D005353 ORTHO05D006248 5.0e-06 55.5 133 35.3
Sopen07g022530 Solanum pennellii HOM05D005353 ORTHO05D006248 5.0e-06 55.5 135 37.8
CANSAT78G1361 Cannabis sativa HOM05D005353 ORTHO05D006248 6.6e-06 55.1 135 37.8
Cpa.g.sc146.5 Carica papaya HOM05D005353 ORTHO05D006248 6.6e-06 55.1 135 38.5
PGSC0003DMG401013561 Solanum tuberosum HOM05D005353 ORTHO05D006248 6.6e-06 55.1 135 37.8
GSVIVG01017718001 Vitis vinifera HOM05D005353 ORTHO05D006248 6.6e-06 55.1 134 36.6
Atru.chr4.3195 Acer truncatum HOM05D005353 ORTHO05D006248 8.6e-06 54.7 135 35.6
CARHR092930 Cardamine hirsuta HOM05D005353 ORTHO05D006248 8.6e-06 54.7 134 35.1
CBR_g40142 Chara braunii HOM05D005353 ORTHO05D006248 8.6e-06 54.7 150 35.3
Sc10g0003710 Simmondsia chinensis HOM05D005353 ORTHO05D006248 8.6e-06 54.7 136 36.8


User provided reference genes

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