Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038100 Camellia sinensis var. sinensis HOM05D003774 ORTHO05D009174 3.0e-142 508.4 249 100.0
CSS0003364 Camellia sinensis var. sinensis HOM05D003774 ORTHO05D009174 3.1e-115 418.7 244 86.1
CSS0038880 Camellia sinensis var. sinensis HOM05D003774 ORTHO05D009174 1.4e-94 350.1 201 86.6
Actinidia29410 Actinidia chinensis HOM05D003774 ORTHO05D009174 5.0e-89 331.6 222 74.8
Rhsim11G0052900 Rhododendron simsii HOM05D003774 ORTHO05D009174 6.2e-87 324.7 221 73.8
DCAR_003529 Daucus carota HOM05D003774 ORTHO05D009174 3.9e-81 305.4 226 66.4
TAR624G0812 Trochodendron aralioides HOM05D003774 ORTHO05D009174 1.1e-80 303.9 235 65.1
Cfa012969 Carpinus fangiana HOM05D003774 ORTHO05D009174 8.9e-78 294.3 203 70.0
QL02p014374 Quercus lobata HOM05D003774 ORTHO05D009174 2.0e-77 293.1 223 64.6
GSVIVG01026084001 Vitis vinifera HOM05D003774 ORTHO05D009174 2.6e-77 292.7 210 67.1
Atru.chr13.2367 Acer truncatum HOM05D003774 ORTHO05D009174 3.4e-77 292.4 219 66.2
Potri.019G079000 Populus trichocarpa HOM05D003774 ORTHO05D009174 4.4e-77 292.0 230 62.6
Ciclev10001943m.g Citrus clementina HOM05D003774 ORTHO05D009174 2.9e-76 289.3 231 64.5
CiPaw.07G235700 Carya illinoinensis HOM05D003774 ORTHO05D009174 4.9e-76 288.5 198 68.2
Manes.02G198600 Manihot esculenta HOM05D003774 ORTHO05D009174 6.4e-76 288.1 229 63.8
Thecc.08G192500 Theobroma cacao HOM05D003774 ORTHO05D009174 9.2e-75 284.3 203 68.0
FAN18G3876 Fragaria x ananassa HOM05D003402 ORTHO05D003939 4.6e-74 282.0 198 67.2
FvH4_5g31620 Fragaria vesca HOM05D003774 ORTHO05D009174 1.0e-73 280.8 214 62.6
COL.COLO4_24651 Corchorus olitorius HOM05D003774 ORTHO05D009174 1.7e-73 280.0 198 67.2
RcHm_v2.0_Chr7g0227151 Rosa chinensis HOM05D003774 ORTHO05D009174 1.7e-73 280.0 198 67.7
Prupe.1G555600 Prunus persica HOM05D003774 ORTHO05D009174 5.1e-73 278.5 198 66.2
FAN22G1282 Fragaria x ananassa HOM05D003774 ORTHO05D009174 1.1e-72 277.3 198 66.7
TWI59G1355 Tripterygium wilfordii HOM05D003774 ORTHO05D009174 7.3e-72 274.6 207 64.7
Lj3g0005610 Lotus japonicus HOM05D003774 ORTHO05D009174 6.2e-71 271.6 198 63.6
Cc10_g09600 Coffea canephora HOM05D003774 ORTHO05D009174 1.4e-70 270.4 198 66.7
Oeu013896.2 Olea europaea HOM05D003774 ORTHO05D009174 1.8e-70 270.0 203 62.6
Sabra13G0091200 Salix brachista HOM05D003774 ORTHO05D009174 2.4e-70 269.6 202 63.9
Gohir.A13G119000 Gossypium hirsutum HOM05D003774 ORTHO05D009174 9.0e-70 267.7 186 67.7
TPR.G25492 Trifolium pratense HOM05D003774 ORTHO05D009174 4.4e-69 265.4 198 62.1
MBI09_g10676_MAGBIO Magnolia biondii HOM05D003774 ORTHO05D009174 9.9e-69 264.2 223 59.2
Eucgr.F02990 Eucalyptus grandis HOM05D003774 ORTHO05D009174 3.8e-68 262.3 204 63.7
Dinv19855 Davidia involucrata HOM05D003774 ORTHO05D009174 8.4e-68 261.2 171 73.7
Gohir.D13G122800 Gossypium hirsutum HOM05D003774 ORTHO05D009174 8.4e-68 261.2 198 64.6
Gorai.013G137800 Gossypium raimondii HOM05D003774 ORTHO05D009174 8.4e-68 261.2 198 64.6
Lsat_1_v5_gn_1_25820 Lactuca sativa HOM05D003774 ORTHO05D009174 3.2e-67 259.2 237 54.0
Nitab4.5_0001463g0050 Nicotiana tabacum HOM05D003774 ORTHO05D009174 5.4e-67 258.5 216 61.6
Phvul.005G000200 Phaseolus vulgaris HOM05D003774 ORTHO05D009174 5.4e-67 258.5 198 62.1
Glyma.06G325100 Glycine max HOM05D003774 ORTHO05D009174 7.1e-67 258.1 199 62.8
CANSAT25G3020 Cannabis sativa HOM05D003774 ORTHO05D009174 9.3e-67 257.7 203 61.1
PGR042G3286 Punica granatum HOM05D003774 ORTHO05D009174 1.2e-66 257.3 204 63.2
PGSC0003DMG402025647 Solanum tuberosum HOM05D003774 ORTHO05D009174 2.7e-66 256.1 208 62.5
PSO017G5271 Papaver somniferum HOM05D003774 ORTHO05D009174 7.8e-66 254.6 202 59.4
Psat1g003280 Pisum sativum HOM05D003774 ORTHO05D009174 3.9e-65 252.3 198 60.6
Nitab4.5_0005616g0010 Nicotiana tabacum HOM05D003774 ORTHO05D009174 6.6e-65 251.5 208 61.1
Sopen11g022610 Solanum pennellii HOM05D003774 ORTHO05D009174 6.6e-65 251.5 216 60.2
PSO170G6059 Papaver somniferum HOM05D003774 ORTHO05D009174 1.1e-64 250.8 202 58.9
Nn1g08406 Nelumbo nucifera HOM05D003774 ORTHO05D009174 5.6e-64 248.4 207 58.5
Medtr3g005060 Medicago truncatula HOM05D003774 ORTHO05D009174 7.3e-64 248.1 198 58.1
Solyc11g027840.2 Solanum lycopersicum HOM05D003774 ORTHO05D009174 7.3e-64 248.1 208 60.1
ECA247G3883 Erigeron canadensis HOM05D003774 ORTHO05D009174 9.6e-64 247.7 205 59.0
MD08G1217800 Malus domestica HOM05D003774 ORTHO05D009174 9.6e-64 247.7 206 60.7
Ah.05g178580 Amaranthus hybridus HOM05D003774 ORTHO05D009174 3.6e-63 245.7 221 53.8
Aqoxy5G02648 Aquilegia oxysepala HOM05D003774 ORTHO05D009174 4.8e-63 245.4 203 57.6
MSTRG.22470 Avicennia marina HOM05D003774 ORTHO05D009174 4.8e-63 245.4 213 56.3
VMungo1080G0925 Vigna mungo HOM05D003774 ORTHO05D009174 8.1e-63 244.6 199 59.8
ATR0320G028 Amborella trichopoda HOM05D003774 ORTHO05D009174 1.8e-62 243.4 209 56.0
Haze_21313 Corylus avellana HOM05D003774 ORTHO05D009174 1.8e-62 243.4 203 61.6
EL10Ac1g00136 Beta vulgaris HOM05D003774 ORTHO05D009174 2.4e-62 243.0 194 59.8
AUR62004600 Chenopodium quinoa HOM05D003774 ORTHO05D009174 3.1e-62 242.7 195 60.5
HanXRQChr02g0036581 Helianthus annuus HOM05D003774 ORTHO05D009174 4.0e-62 242.3 194 60.8
AUR62023544 Chenopodium quinoa HOM05D003774 ORTHO05D009174 1.5e-61 240.4 218 55.5
THA.LOC104816521 Tarenaya hassleriana HOM05D003774 ORTHO05D009174 1.5e-61 240.4 204 56.9
BcaB07g33408 Brassica carinata HOM05D003774 ORTHO05D009174 5.8e-61 238.4 192 60.4
CARHR034180 Cardamine hirsuta HOM05D003774 ORTHO05D009174 7.6e-61 238.0 211 56.9
AT1G35420 Arabidopsis thaliana HOM05D003774 ORTHO05D009174 6.4e-60 235.0 192 58.3
Aa31LG6G8720 Aethionema arabicum HOM05D003774 ORTHO05D009174 1.4e-59 233.8 206 57.3
Sp1g30140 Schrenkiella parvula HOM05D003774 ORTHO05D009174 1.2e-58 230.7 192 58.3
CDE08G0174 Ceratophyllum demersum HOM05D003774 ORTHO05D009174 1.0e-57 227.6 199 56.8
SalBow6G0569 Salvia bowleyana HOM05D003774 ORTHO05D009174 1.0e-57 227.6 194 58.2
Migut.N03372 Erythranthe guttata HOM05D003774 ORTHO05D009174 5.1e-57 225.3 247 49.4
AL1G50230 Arabidopsis lyrata HOM05D003774 ORTHO05D009174 6.7e-57 224.9 193 57.0
Carub.0001s3302 Capsella rubella HOM05D003774 ORTHO05D009174 8.7e-57 224.6 206 54.4
SalBow6G5656 Salvia bowleyana HOM05D003774 ORTHO05D009174 1.1e-56 224.2 194 57.7
Thhalv10001825m.g Eutrema salsugineum HOM05D003774 ORTHO05D009174 3.3e-56 222.6 183 58.5
BraA09t38720Z Brassica rapa HOM05D003774 ORTHO05D009174 5.6e-56 221.9 192 55.7
Duzib211G0171 Durio zibethinus HOM05D003774 ORTHO05D009174 5.6e-56 221.9 161 67.1
Zm00001eb348780 Zea mays HOM05D003774 ORTHO05D009174 9.6e-56 221.1 187 56.7
C06p11130 Brassica napus HOM05D003774 ORTHO05D009174 4.8e-55 218.8 202 54.5
BcaC08g43731 Brassica carinata HOM05D003774 ORTHO05D009174 6.2e-55 218.4 202 54.5
BolC6t36236H Brassica oleracea HOM05D003774 ORTHO05D009174 6.2e-55 218.4 202 54.5
HPP92_011955 Vanilla planifolia HOM05D003774 ORTHO05D009174 8.1e-55 218.0 201 54.7
A09p31810 Brassica napus HOM05D003774 ORTHO05D009174 1.4e-54 217.2 193 55.4
HPP92_011935 Vanilla planifolia HOM05D003774 ORTHO05D009174 1.8e-54 216.9 201 54.2
ClCG08G000170 Citrullus lanatus HOM05D003774 ORTHO05D009174 1.7e-52 210.3 190 55.8
Glyma.04G256500 Glycine max HOM05D003774 ORTHO05D009174 1.2e-50 204.1 207 50.7
BcaNung06721 Brassica carinata HOM05D003774 ORTHO05D009174 1.0e-49 201.1 193 54.9
CsaV3_5G040550 Cucumis sativus L. HOM05D003774 ORTHO05D009174 6.7e-49 198.4 191 54.5
MELO3C022228.2 Cucumis melo HOM05D003774 ORTHO05D009174 8.2e-47 191.4 208 51.4
Sc09g0006790 Simmondsia chinensis HOM05D003774 ORTHO05D009174 8.2e-47 191.4 159 59.1
CDE02G0175 Ceratophyllum demersum HOM05D003774 ORTHO05D009174 9.0e-46 188.0 227 45.8
SGA_v2.0_scaffold25G11034 Striga asiatica HOM05D003774 ORTHO05D009174 1.3e-41 174.1 234 46.6
Mapoly0002s0135 Marchantia polymorpha HOM05D003774 ORTHO05D009174 3.0e-41 172.9 186 45.7
AagrBONN_evm.TU.Sc2ySwM_228.1693 Anthoceros agrestis HOM05D003774 ORTHO05D009174 2.8e-39 166.4 194 44.3
SEGI_39255 Sequoiadendron giganteum HOM05D003774 ORTHO05D009174 1.4e-33 147.5 121 54.5
PGSC0003DMG401025647 Solanum tuberosum HOM05D003774 ORTHO05D009174 1.9e-32 143.7 115 57.4
Cpa.g.sc66.2 Carica papaya HOM05D003774 ORTHO05D009174 2.6e-29 133.3 96 63.5
CDE08G1139 Ceratophyllum demersum HOM05D003774 ORTHO05D009174 7.2e-27 125.2 96 62.5
Pp3c10_21530 Physcomitrium patens HOM05D003774 ORTHO05D009174 3.9e-25 119.4 228 36.0
Medtr1g052490 Medicago truncatula HOM05D003774 ORTHO05D009174 1.1e-22 111.3 105 45.7
Potri.013G105634 Populus trichocarpa HOM05D003774 ORTHO05D009174 1.5e-21 107.5 151 43.7
FAN04G1660 Fragaria x ananassa HOM05D003774 ORTHO05D009174 4.2e-19 99.4 77 63.6
SEGI_30677 Sequoiadendron giganteum HOM05D003774 ORTHO05D009174 1.4e-17 94.4 81 54.3
SEGI_34335 Sequoiadendron giganteum HOM05D003774 ORTHO05D009174 1.4e-17 94.4 81 54.3
CBR_g29932 Chara braunii HOM05D003774 ORTHO05D009174 2.2e-15 87.0 174 32.8
Pp3c17_9260 Physcomitrium patens HOM05D003774 ORTHO05D009174 7.2e-11 72.0 73 42.5
Pp3c14_5820 Physcomitrium patens HOM05D003774 ORTHO05D009174 1.4e-09 67.8 66 43.9
Os05g0429500 Oryza sativa ssp. japonica HOM05D003774 ORTHO05D009174 2.3e-09 67.0 43 69.8
ATR0626G380 Amborella trichopoda HOM05D001214 ORTHO05D001029 3.0e-09 66.6 184 28.8
Migut.N00145 Erythranthe guttata HOM05D001214 ORTHO05D001029 2.6e-08 63.5 96 37.5
Sopen09g026380 Solanum pennellii HOM05D001214 ORTHO05D001029 7.5e-08 62.0 131 30.5
DCAR_012171 Daucus carota HOM05D001214 ORTHO05D001029 9.7e-08 61.6 148 28.4
Solyc09g064720.3 Solanum lycopersicum HOM05D001214 ORTHO05D001029 9.7e-08 61.6 131 30.5
Migut.N00144 Erythranthe guttata HOM05D001214 ORTHO05D001029 1.3e-07 61.2 100 35.0
HanXRQChr10g0310281 Helianthus annuus HOM05D001214 ORTHO05D001029 1.3e-07 61.2 133 33.8
CSS0004711 Camellia sinensis var. sinensis HOM05D001214 ORTHO05D001029 2.8e-07 60.1 136 27.2
HanXRQChr12g0359431 Helianthus annuus HOM05D001214 ORTHO05D001029 2.8e-07 60.1 143 32.9
Ca_21586_v3 Cicer arietinum L. HOM05D001214 ORTHO05D001029 3.7e-07 59.7 140 29.3
vmacro08266 Vaccinium macrocarpon HOM05D001214 ORTHO05D001029 4.8e-07 59.3 94 34.0
ECA234G2901 Erigeron canadensis HOM05D001214 ORTHO05D001029 6.3e-07 58.9 159 28.9
HanXRQChr10g0310251 Helianthus annuus HOM05D001214 ORTHO05D001029 6.3e-07 58.9 129 34.9
Lj3C760G9 Lonicera japonica HOM05D001214 ORTHO05D001029 8.2e-07 58.5 209 26.3
arahy.Tifrunner.gnm1.ann1.CECC7V Arachis hypogaea HOM05D001214 ORTHO05D001029 1.1e-06 58.2 99 29.3
arahy.Tifrunner.gnm1.ann1.EGQH3V Arachis hypogaea HOM05D001214 ORTHO05D001029 1.1e-06 58.2 99 29.3
Cpa.g.sc16.40 Carica papaya HOM05D001214 ORTHO05D001029 1.1e-06 58.2 94 34.0
Eucgr.B01155 Eucalyptus grandis HOM05D001214 ORTHO05D001029 1.1e-06 58.2 105 31.4
Manes.03G186000 Manihot esculenta HOM05D001214 ORTHO05D001029 1.1e-06 58.2 182 26.4
RcHm_v2.0_Chr4g0418561 Rosa chinensis HOM05D001214 ORTHO05D001029 1.4e-06 57.8 168 27.4
CAN.G109.3 Capsicum annuum HOM05D001214 ORTHO05D001029 1.8e-06 57.4 93 32.3
Gohir.D10G171200 Gossypium hirsutum HOM05D001214 ORTHO05D001029 1.8e-06 57.4 123 29.3
Oeu029300.1 Olea europaea HOM05D001214 ORTHO05D001029 1.8e-06 57.4 134 29.1
CSS0013531 Camellia sinensis var. sinensis HOM05D001214 ORTHO05D001029 2.4e-06 57.0 93 31.2
Phvul.003G095100 Phaseolus vulgaris HOM05D001214 ORTHO05D001029 2.4e-06 57.0 104 26.9
Solyc09g072900.4 Solanum lycopersicum HOM05D001214 ORTHO05D001029 2.4e-06 57.0 136 27.9
Eucgr.B01154 Eucalyptus grandis HOM05D001214 ORTHO05D001029 3.1e-06 56.6 133 30.8
Glyma.07G255900 Glycine max HOM05D001214 ORTHO05D001029 3.1e-06 56.6 122 28.7
Gorai.011G191300 Gossypium raimondii HOM05D001214 ORTHO05D001029 3.1e-06 56.6 123 29.3
RcHm_v2.0_Chr4g0418571 Rosa chinensis HOM05D001214 ORTHO05D001029 3.1e-06 56.6 144 27.1
PGSC0003DMG400003793 Solanum tuberosum HOM05D001214 ORTHO05D001029 3.1e-06 56.6 136 28.7
MSTRG.3984 Avicennia marina HOM05D001214 ORTHO05D001029 4.1e-06 56.2 124 31.5
Hma1.2p1_0511F.1_g169130 Hydrangea macrophylla HOM05D001214 ORTHO05D001029 4.1e-06 56.2 131 27.5
Psat4g030800 Pisum sativum HOM05D001214 ORTHO05D001029 4.1e-06 56.2 131 26.0
Rhsim04G0208300 Rhododendron simsii HOM05D001214 ORTHO05D001029 4.1e-06 56.2 132 25.8
Sc13g0003870 Simmondsia chinensis HOM05D001214 ORTHO05D001029 4.1e-06 56.2 132 25.8
Sopen09g028730 Solanum pennellii HOM05D001214 ORTHO05D001029 4.1e-06 56.2 136 27.9
Duzib212G0920 Durio zibethinus HOM05D001214 ORTHO05D001029 5.3e-06 55.8 168 25.0
Eucgr.K03402 Eucalyptus grandis HOM05D001214 ORTHO05D001029 5.3e-06 55.8 99 29.3
HanXRQChr10g0310351 Helianthus annuus HOM05D001214 ORTHO05D001029 5.3e-06 55.8 129 31.8
Potri.008G201400 Populus trichocarpa HOM05D001214 ORTHO05D001029 5.3e-06 55.8 125 28.0
Actinidia23467 Actinidia chinensis HOM05D001214 ORTHO05D001029 7.0e-06 55.5 99 28.3
AUR62002637 Chenopodium quinoa HOM05D001214 ORTHO05D001029 7.0e-06 55.5 150 28.7
Eucgr.B01152 Eucalyptus grandis HOM05D001214 ORTHO05D001029 7.0e-06 55.5 182 26.9
Peaxi162Scf00095g00921 Petunia axillaris HOM05D001214 ORTHO05D001029 7.0e-06 55.5 191 26.7
TWI12G0478 Tripterygium wilfordii HOM05D001214 ORTHO05D001029 7.0e-06 55.5 136 25.7
CSS0047107 Camellia sinensis var. sinensis HOM05D001214 ORTHO05D001029 9.1e-06 55.1 172 25.0
Cpa.g.sc16.38 Carica papaya HOM05D001214 ORTHO05D001029 9.1e-06 55.1 136 30.1
Sopen01g032000 Solanum pennellii HOM05D001214 ORTHO05D001029 9.1e-06 55.1 94 34.0
TPR.G20120 Trifolium pratense HOM05D001214 ORTHO05D001029 9.1e-06 55.1 103 35.9


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