Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038071 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 5.2e-83 311.2 185 100.0
CSS0002487 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.1e-53 213.8 185 75.1
CSS0012893 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.1e-53 213.8 185 75.1
CSS0020953 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.1e-53 213.8 185 75.1
CSS0042621 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 3.7e-52 208.8 187 73.8
CSS0048721 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.8e-51 206.5 185 73.5
CSS0007177 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.5e-50 203.4 185 72.4
CSS0032614 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 5.9e-50 201.4 185 73.0
CSS0035704 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 3.6e-23 112.5 106 57.5
CSS0030618 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.0e-22 110.9 66 80.3
CSS0040728 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.8e-22 110.2 107 57.9
CSS0007280 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.6e-21 106.3 66 78.8
CSS0013618 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 3.7e-20 102.4 145 40.7
CSS0042015 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.8e-19 100.1 149 39.6
CSS0005185 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 5.3e-19 98.6 149 39.6
CSS0040160 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 5.3e-19 98.6 149 39.6
CSS0007522 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 7.0e-19 98.2 151 38.4
CSS0046119 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 7.0e-19 98.2 150 39.3
CSS0016088 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 9.1e-19 97.8 151 39.1
CSS0008214 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.2e-18 97.4 151 39.1
CSS0004182 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.0e-18 96.7 144 41.0
CSS0045334 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.7e-18 96.3 155 38.1
CSS0037011 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 3.5e-18 95.9 156 37.8
CSS0010423 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 4.5e-18 95.5 144 41.0
CSS0018539 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 4.5e-18 95.5 149 38.3
CSS0001339 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 7.7e-18 94.7 150 38.0
CSS0033025 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 7.7e-18 94.7 149 39.6
CSS0033950 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 7.7e-18 94.7 149 39.6
CSS0041437 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 7.7e-18 94.7 149 39.6
CSS0044969 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 7.7e-18 94.7 151 37.7
CSS0000891 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.7e-17 93.6 149 39.6
CSS0001231 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.7e-17 93.6 149 39.6
CSS0003542 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.7e-17 93.6 149 39.6
CSS0027060 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.7e-17 93.6 149 39.6
CSS0041327 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.7e-17 93.6 149 39.6
Rhsim01G0079900 Rhododendron simsii HOM05D005012 ORTHO05D005886 1.7e-17 93.6 155 36.1
CSS0028601 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.2e-17 93.2 149 39.6
Rhsim01G0158900 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.5e-16 90.5 154 35.7
Rhsim01G0079300 Rhododendron simsii HOM05D005012 ORTHO05D005886 1.6e-15 87.0 155 34.2
Rhsim07G0133200 Rhododendron simsii HOM05D005012 ORTHO05D005886 4.8e-12 75.5 120 35.8
Rhsim09G0006300 Rhododendron simsii HOM05D005012 ORTHO05D005886 4.1e-11 72.4 119 34.5
TWI79G1319 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 1.2e-10 70.9 143 32.9
FAN04G2098 Fragaria x ananassa HOM05D005012 ORTHO05D005886 1.6e-10 70.5 156 32.1
FAN04G2537 Fragaria x ananassa HOM05D005012 ORTHO05D005886 1.6e-10 70.5 156 32.1
FAN04G2636 Fragaria x ananassa HOM05D005012 ORTHO05D005886 1.6e-10 70.5 156 32.1
FAN15G1881 Fragaria x ananassa HOM05D005012 ORTHO05D005886 1.6e-10 70.5 156 32.1
FAN25G0106 Fragaria x ananassa HOM05D005012 ORTHO05D005886 1.6e-10 70.5 156 32.1
FvH4_3g22860 Fragaria vesca HOM05D005012 ORTHO05D005886 2.0e-10 70.1 132 35.6
FAN11G2763 Fragaria x ananassa HOM05D005012 ORTHO05D008319 2.0e-10 70.1 132 35.6
CSS0009064 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 3.5e-10 69.3 130 37.7
FvH4_6g37930 Fragaria vesca HOM05D005012 ORTHO05D005886 7.7e-10 68.2 126 34.9
FAN04G0818 Fragaria x ananassa HOM05D005012 ORTHO05D005886 1.0e-09 67.8 155 31.6
FAN17G1574 Fragaria x ananassa HOM05D005012 ORTHO05D005886 1.0e-09 67.8 126 36.5
TWI77G0909 Tripterygium wilfordii HOM05D005012 ORTHO05D005886 2.3e-09 66.6 137 32.8
FAN13G1160 Fragaria x ananassa HOM05D005012 ORTHO05D005886 5.0e-09 65.5 156 31.4
FAN16G2537 Fragaria x ananassa HOM05D005012 ORTHO05D005886 5.0e-09 65.5 128 32.8
FAN10G0147 Fragaria x ananassa HOM05D000539 ORTHO05D000592 6.5e-09 65.1 128 32.8
FAN26G2139 Fragaria x ananassa HOM05D005012 ORTHO05D005886 6.5e-09 65.1 128 32.8
RcHm_v2.0_Chr6g0273901 Rosa chinensis HOM05D005012 ORTHO05D005886 6.5e-09 65.1 126 31.7
FAN19G1173 Fragaria x ananassa HOM05D005012 ORTHO05D005886 8.6e-09 64.7 156 31.4
FAN04G2305 Fragaria x ananassa HOM05D005012 ORTHO05D005886 1.1e-08 64.3 128 31.2
FAN20G1519 Fragaria x ananassa HOM05D005012 ORTHO05D005886 1.1e-08 64.3 128 32.0
FAN15G1928 Fragaria x ananassa HOM05D005012 ORTHO05D005886 1.9e-08 63.5 124 32.3
FvH4_1g29802 Fragaria vesca HOM05D005012 ORTHO05D005886 4.2e-08 62.4 128 32.0
FAN07G2178 Fragaria x ananassa HOM05D005012 ORTHO05D005886 3.6e-07 59.3 123 31.7
vmacro03774 Vaccinium macrocarpon HOM05D005012 ORTHO05D005886 8.0e-07 58.2 125 32.0
RcHm_v2.0_Chr7g0222641 Rosa chinensis HOM05D005012 ORTHO05D005886 1.0e-06 57.8 147 27.9
CSS0012868 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 3.0e-06 56.2 54 48.1
CSS0019574 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 5.2e-06 55.5 54 48.1
CSS0022677 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 5.2e-06 55.5 50 50.0
CSS0038015 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 5.2e-06 55.5 50 50.0


User provided reference genes

Program Settings