Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038042 Camellia sinensis var. sinensis HOM05D034440 ORTHO05D033860 1.4e-31 139.0 74 100.0
CSS0048379 Camellia sinensis var. sinensis HOM05D034440 ORTHO05D033860 5.1e-29 130.6 74 93.2
CSS0002904 Camellia sinensis var. sinensis HOM05D034440 ORTHO05D033860 4.9e-24 114.0 75 84.0
Rhsim07G0077900 Rhododendron simsii HOM05D000183 ORTHO05D000100 1.3e-13 79.3 69 62.3
vmacro13850 Vaccinium macrocarpon HOM05D000183 ORTHO05D000100 1.5e-12 75.9 73 58.9
Peaxi162Scf00074g00025 Petunia axillaris HOM05D000183 ORTHO05D000100 1.1e-07 59.7 58 58.6
Cc08_g16780 Coffea canephora HOM05D000183 ORTHO05D000100 3.2e-07 58.2 62 51.6
Actinidia22208 Actinidia chinensis HOM05D000183 ORTHO05D000100 9.3e-07 56.6 70 51.4
Duzib205G0556 Durio zibethinus HOM05D000183 ORTHO05D000100 1.6e-06 55.8 63 49.2
Gohir.A12G240300 Gossypium hirsutum HOM05D000183 ORTHO05D000100 1.6e-06 55.8 76 48.7
Gohir.D12G241600 Gossypium hirsutum HOM05D000183 ORTHO05D000100 1.6e-06 55.8 76 50.0
Gorai.008G258900 Gossypium raimondii HOM05D000183 ORTHO05D000100 1.6e-06 55.8 76 50.0
Nitab4.5_0004251g0010 Nicotiana tabacum HOM05D000183 ORTHO05D000100 1.6e-06 55.8 65 50.8
Nitab4.5_0007001g0020 Nicotiana tabacum HOM05D000183 ORTHO05D000100 1.6e-06 55.8 65 50.8
Sabra01G0060600 Salix brachista HOM05D000183 ORTHO05D000100 2.7e-06 55.1 47 63.8
QL12p036927 Quercus lobata HOM05D000183 ORTHO05D000100 4.6e-06 54.3 40 67.5
CiPaw.11G111900 Carya illinoinensis HOM05D000183 ORTHO05D000100 7.9e-06 53.5 38 73.7
COL.COLO4_10800 Corchorus olitorius HOM05D000183 ORTHO05D000100 7.9e-06 53.5 63 49.2


User provided reference genes

Program Settings