Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038040 Camellia sinensis var. sinensis HOM05D002027 ORTHO05D024703 8.4e-55 216.9 115 100.0
CSS0032324 Camellia sinensis var. sinensis HOM05D002027 ORTHO05D004229 1.4e-46 189.5 99 100.0
Dinv33435 Davidia involucrata HOM05D002027 ORTHO05D004229 2.0e-24 115.9 137 55.5
GSVIVG01032392001 Vitis vinifera HOM05D002027 ORTHO05D004229 1.0e-23 113.6 110 60.9
CSS0010446 Camellia sinensis var. sinensis HOM05D002027 ORTHO05D024703 9.3e-22 107.1 125 52.8
Hma1.2p1_1747F.1_g300460 Hydrangea macrophylla HOM05D002027 ORTHO05D004229 1.3e-18 96.7 133 47.4
Hma1.2p1_2550F.1_g324240 Hydrangea macrophylla HOM05D002027 ORTHO05D004229 1.3e-18 96.7 133 47.4
COL.COLO4_29156 Corchorus olitorius HOM05D002027 ORTHO05D004229 2.8e-18 95.5 100 53.0
Cc07_g01580 Coffea canephora HOM05D002027 ORTHO05D004229 1.8e-17 92.8 119 50.4
Lju41A42G102 Lonicera japonica HOM05D002027 ORTHO05D004229 1.8e-17 92.8 134 44.8
Nitab4.5_0001860g0060 Nicotiana tabacum HOM05D002027 ORTHO05D004229 1.8e-17 92.8 103 51.5
Solyc02g067870.3 Solanum lycopersicum HOM05D002027 ORTHO05D004229 1.8e-17 92.8 109 51.4
Sopen02g016990 Solanum pennellii HOM05D002027 ORTHO05D004229 1.8e-17 92.8 109 49.5
PSO541G4480 Papaver somniferum HOM05D002027 ORTHO05D004229 3.1e-17 92.0 124 44.4
vmacro05869 Vaccinium macrocarpon HOM05D002027 ORTHO05D004229 3.1e-17 92.0 116 47.4
TAR374G0231 Trochodendron aralioides HOM05D002027 ORTHO05D004229 1.2e-16 90.1 118 47.5
Nitab4.5_0003318g0090 Nicotiana tabacum HOM05D002027 ORTHO05D004229 1.5e-16 89.7 99 49.5
Rhsim10G0015500 Rhododendron simsii HOM05D002027 ORTHO05D004229 2.6e-16 89.0 123 48.0
Rhsim10G0016600 Rhododendron simsii HOM05D002027 ORTHO05D004229 2.6e-16 89.0 124 48.4
PSO541G4249 Papaver somniferum HOM05D002027 ORTHO05D004229 7.7e-16 87.4 82 53.7
Migut.H00065 Erythranthe guttata HOM05D002027 ORTHO05D004229 1.7e-15 86.3 124 50.8
Nitab4.5_0001550g0100 Nicotiana tabacum HOM05D002027 ORTHO05D004229 1.7e-15 86.3 129 43.4
TAR625G0926 Trochodendron aralioides HOM05D002027 ORTHO05D004229 1.7e-15 86.3 97 49.5
Oeu018142.1 Olea europaea HOM05D002027 ORTHO05D004229 2.2e-15 85.9 112 52.7
CAN.G1057.9 Capsicum annuum HOM05D002027 ORTHO05D004229 2.9e-15 85.5 114 45.6
Ciclev10017779m.g Citrus clementina HOM05D002027 ORTHO05D004229 3.8e-15 85.1 48 81.2
Rhsim10G0015400 Rhododendron simsii HOM05D002027 ORTHO05D024703 5.0e-15 84.7 61 67.2
Prupe.3G292900 Prunus persica HOM05D002027 ORTHO05D004229 6.5e-15 84.3 54 75.9
PSO754G0009 Papaver somniferum HOM05D002027 ORTHO05D004229 1.4e-14 83.2 96 46.9
Peaxi162Scf00080g01317 Petunia axillaris HOM05D002027 ORTHO05D004229 1.4e-14 83.2 122 42.6
Nitab4.5_0002529g0060 Nicotiana tabacum HOM05D002027 ORTHO05D004229 2.5e-14 82.4 126 41.3
PSO111G0085 Papaver somniferum HOM05D002027 ORTHO05D004229 3.2e-14 82.0 74 54.1
SGA_v2.0_scaffold18G08275 Striga asiatica HOM05D002027 ORTHO05D004229 4.2e-14 81.6 123 42.3
Cpa.g.c26638.2 Carica papaya HOM05D002027 ORTHO05D004229 5.5e-14 81.3 51 70.6
Oeu054624.1 Olea europaea HOM05D002027 ORTHO05D004229 1.2e-13 80.1 107 51.4
DCAR_021726 Daucus carota HOM05D002027 ORTHO05D004229 1.6e-13 79.7 108 43.5
vmacro05870 Vaccinium macrocarpon HOM05D002027 ORTHO05D024703 1.6e-13 79.7 69 59.4
Eucgr.I01736 Eucalyptus grandis HOM05D002027 ORTHO05D004229 2.1e-13 79.3 73 53.4
Manes.15G150400 Manihot esculenta HOM05D002027 ORTHO05D004229 2.7e-13 79.0 125 44.0
Nn3g16699 Nelumbo nucifera HOM05D002027 ORTHO05D004229 4.6e-13 78.2 99 45.5
MBI06_g16063_MAGBIO Magnolia biondii HOM05D002027 ORTHO05D004229 7.9e-13 77.4 103 44.7
Rhsim10G0016500 Rhododendron simsii HOM05D000047 ORTHO05D000044 1.4e-12 76.6 46 76.1
Gohir.A07G223800 Gossypium hirsutum HOM05D002027 ORTHO05D004229 1.1e-11 73.6 67 56.7
PSO832G3286 Papaver somniferum HOM05D002027 ORTHO05D004229 1.1e-11 73.6 49 71.4
TWI56G0726 Tripterygium wilfordii HOM05D002027 ORTHO05D004229 1.1e-11 73.6 59 59.3
CDE08G0066 Ceratophyllum demersum HOM05D002027 ORTHO05D004229 1.5e-11 73.2 64 56.2
PGR142G2457 Punica granatum HOM05D002027 ORTHO05D004229 1.5e-11 73.2 76 53.9
Gorai.001G266000 Gossypium raimondii HOM05D002027 ORTHO05D004229 2.0e-11 72.8 67 55.2
Lsat_1_v5_gn_4_184180 Lactuca sativa HOM05D002027 ORTHO05D004229 3.3e-11 72.0 56 60.7
PSO111G0070 Papaver somniferum HOM05D002027 ORTHO05D004229 3.3e-11 72.0 40 85.0
PSO063G1117 Papaver somniferum HOM05D002027 ORTHO05D004229 7.4e-11 70.9 49 69.4
Aqoxy5G03756 Aquilegia oxysepala HOM05D002027 ORTHO05D004229 1.3e-10 70.1 124 37.9
Gohir.D07G230900 Gossypium hirsutum HOM05D002027 ORTHO05D004229 1.3e-10 70.1 67 53.7
PGR142G3625 Punica granatum HOM05D002027 ORTHO05D004229 1.3e-10 70.1 79 48.1
Dinv25731 Davidia involucrata HOM05D000001 ORTHO05D000003 2.8e-10 68.9 100 49.0
ECA232G2124 Erigeron canadensis HOM05D002027 ORTHO05D004229 2.8e-10 68.9 86 47.7
HanXRQChr09g0255251 Helianthus annuus HOM05D002027 ORTHO05D004229 8.2e-10 67.4 48 62.5
CANSAT64G1847 Cannabis sativa HOM05D002027 ORTHO05D004229 6.9e-09 64.3 66 48.5
Actinidia36120 Actinidia chinensis HOM05D002027 ORTHO05D004229 1.5e-08 63.2 35 82.9
Cfa007350 Carpinus fangiana HOM05D002027 ORTHO05D004229 3.4e-08 62.0 70 48.6
Cfa007348 Carpinus fangiana HOM05D002027 ORTHO05D004229 7.7e-08 60.8 63 49.2
Cfa007345 Carpinus fangiana HOM05D002027 ORTHO05D004229 1.7e-07 59.7 63 49.2
Peaxi162Scf00129g01654 Petunia axillaris HOM05D002027 ORTHO05D004229 1.7e-07 59.7 108 37.0
ATR0824G228 Amborella trichopoda HOM05D002027 ORTHO05D004229 6.5e-07 57.8 45 68.9
Aqoxy5G03754 Aquilegia oxysepala HOM05D002027 ORTHO05D004229 6.5e-07 57.8 61 55.7
CDE01G0735 Ceratophyllum demersum HOM05D002027 ORTHO05D024703 1.1e-06 57.0 58 44.8
PSO754G0050 Papaver somniferum HOM05D002027 ORTHO05D004229 3.2e-06 55.5 33 81.8
ATR0751G184 Amborella trichopoda HOM05D002027 ORTHO05D004229 5.5e-06 54.7 48 56.2


User provided reference genes

Program Settings