Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038027 Camellia sinensis var. sinensis HOM05D007059 ORTHO05D009155 7.7e-129 463.8 226 100.0
Rhsim04G0168700 Rhododendron simsii HOM05D007059 ORTHO05D009155 1.5e-100 369.8 226 83.6
Actinidia38411 Actinidia chinensis HOM05D007059 ORTHO05D009155 3.7e-99 365.2 226 80.5
vmacro08590 Vaccinium macrocarpon HOM05D007059 ORTHO05D009155 1.5e-95 353.2 226 79.2
Lj3A851T65 Lonicera japonica HOM05D007059 ORTHO05D009155 1.3e-83 313.5 245 69.0
TAR629G1440 Trochodendron aralioides HOM05D007059 ORTHO05D009155 1.7e-83 313.2 227 72.2
Thecc.02G295400 Theobroma cacao HOM05D007059 ORTHO05D009155 1.9e-82 309.7 235 72.8
Atru.chr11.1222 Acer truncatum HOM05D007059 ORTHO05D009155 2.4e-82 309.3 228 69.7
Cfa008725 Carpinus fangiana HOM05D004663 ORTHO05D006325 3.5e-81 305.4 228 70.2
GSVIVG01010187001 Vitis vinifera HOM05D007059 ORTHO05D009155 1.3e-80 303.5 225 70.2
Potri.010G169700 Populus trichocarpa HOM05D007059 ORTHO05D009155 1.1e-79 300.4 235 71.5
Prupe.1G344600 Prunus persica HOM05D007059 ORTHO05D009155 3.3e-79 298.9 234 70.5
Sabra10G0129500 Salix brachista HOM05D007059 ORTHO05D009155 4.3e-79 298.5 235 70.6
CiPaw.05G167400 Carya illinoinensis HOM05D007059 ORTHO05D009155 2.8e-78 295.8 228 68.4
Eucgr.G02016 Eucalyptus grandis HOM05D007059 ORTHO05D009155 6.2e-78 294.7 226 66.4
COL.COLO4_16620 Corchorus olitorius HOM05D007059 ORTHO05D009155 1.4e-77 293.5 233 68.7
Nn4g24915 Nelumbo nucifera HOM05D007059 ORTHO05D009155 2.4e-77 292.7 226 67.3
Lalb_Chr01g0001591 Lupinus albus HOM05D007059 ORTHO05D009155 4.0e-77 292.0 226 66.4
Psat7g174240 Pisum sativum HOM05D007059 ORTHO05D009155 1.2e-76 290.4 226 65.5
PSO782G1004 Papaver somniferum HOM05D007059 ORTHO05D009155 2.6e-76 289.3 229 67.7
ECA234G4546 Erigeron canadensis HOM05D007059 ORTHO05D009155 4.4e-76 288.5 226 68.6
Ca_03042_v3 Cicer arietinum L. HOM05D007059 ORTHO05D009155 5.8e-76 288.1 225 64.9
PSO063G1277 Papaver somniferum HOM05D007059 ORTHO05D009155 5.8e-76 288.1 229 67.2
Peaxi162Scf01172g00004 Petunia axillaris HOM05D007059 ORTHO05D009155 7.6e-76 287.7 226 67.3
Ciclev10033522m.g Citrus clementina HOM05D007059 ORTHO05D009155 9.9e-76 287.3 232 67.7
Manes.16G044801 Manihot esculenta HOM05D007059 ORTHO05D009155 3.8e-75 285.4 231 67.1
MD16G1006000 Malus domestica HOM05D007059 ORTHO05D009155 4.9e-75 285.0 234 69.7
TPR.G21564 Trifolium pratense HOM05D007059 ORTHO05D009155 6.4e-75 284.6 226 64.6
CAN.G624.23 Capsicum annuum HOM05D007059 ORTHO05D009155 8.4e-75 284.3 227 69.6
HanXRQChr01g0028541 Helianthus annuus HOM05D007059 ORTHO05D009155 1.4e-74 283.5 227 67.4
Nitab4.5_0002113g0150 Nicotiana tabacum HOM05D007059 ORTHO05D009155 1.9e-74 283.1 226 67.7
Gohir.D01G138500 Gossypium hirsutum HOM05D007059 ORTHO05D009155 2.4e-74 282.7 234 67.1
FvH4_4g36660 Fragaria vesca HOM05D007059 ORTHO05D009155 3.2e-74 282.3 230 65.2
FAN12G0665 Fragaria x ananassa HOM05D007059 ORTHO05D009155 3.2e-74 282.3 230 65.2
Nitab4.5_0007261g0020 Nicotiana tabacum HOM05D007059 ORTHO05D009155 3.2e-74 282.3 227 67.8
Lj3g0001367 Lotus japonicus HOM05D007059 ORTHO05D009155 5.4e-74 281.6 226 65.0
Sopen04g004490 Solanum pennellii HOM05D007059 ORTHO05D009155 7.1e-74 281.2 228 68.4
FAN07G2854 Fragaria x ananassa HOM05D007059 ORTHO05D009155 1.2e-73 280.4 230 65.2
Glyma.11G104100 Glycine max HOM05D007059 ORTHO05D009155 1.2e-73 280.4 225 64.0
PGSC0003DMG400032539 Solanum tuberosum HOM05D007059 ORTHO05D009155 1.2e-73 280.4 227 68.3
Gorai.002G167400 Gossypium raimondii HOM05D007059 ORTHO05D009155 1.6e-73 280.0 234 66.7
MBI06_g22349_MAGBIO Magnolia biondii HOM05D007059 ORTHO05D009155 2.7e-73 279.3 226 65.0
VMungo1127G1389 Vigna mungo HOM05D007059 ORTHO05D009155 2.7e-73 279.3 225 65.3
Solyc04g009370.4 Solanum lycopersicum HOM05D007059 ORTHO05D009155 3.5e-73 278.9 228 68.0
Medtr4g074210 Medicago truncatula HOM05D007059 ORTHO05D009155 4.6e-73 278.5 229 62.4
Glyma.12G029100 Glycine max HOM05D007059 ORTHO05D009155 1.0e-72 277.3 225 62.7
Gohir.A01G145900 Gossypium hirsutum HOM05D007059 ORTHO05D009155 1.3e-72 276.9 232 65.9
RcHm_v2.0_Chr4g0446371 Rosa chinensis HOM05D007059 ORTHO05D009155 8.7e-72 274.2 230 64.8
Phvul.011G032300 Phaseolus vulgaris HOM05D007059 ORTHO05D009155 1.5e-71 273.5 225 64.4
Cc11_g00200 Coffea canephora HOM05D007059 ORTHO05D009155 4.3e-71 271.9 228 64.5
Lsat_1_v5_gn_4_26421 Lactuca sativa HOM05D007059 ORTHO05D009155 5.6e-71 271.6 228 65.4
ClCG11G001160 Citrullus lanatus HOM05D007059 ORTHO05D009155 3.6e-70 268.9 231 61.0
MSTRG.2053 Avicennia marina HOM05D007059 ORTHO05D009155 1.4e-69 266.9 231 64.9
Sc10g0008670 Simmondsia chinensis HOM05D007059 ORTHO05D009155 1.8e-69 266.5 229 62.4
Migut.E00704 Erythranthe guttata HOM05D007059 ORTHO05D009155 4.0e-69 265.4 230 61.7
TWI77G0260 Tripterygium wilfordii HOM05D007059 ORTHO05D009155 4.0e-69 265.4 203 68.5
Aqoxy3G04246 Aquilegia oxysepala HOM05D007059 ORTHO05D009155 9.0e-69 264.2 231 64.5
Haze_11738 Corylus avellana HOM05D007059 ORTHO05D009155 1.5e-68 263.5 207 67.1
MELO3C020030.2 Cucumis melo HOM05D007059 ORTHO05D009155 1.5e-68 263.5 228 61.4
Duzib251G0490 Durio zibethinus HOM05D007059 ORTHO05D009155 1.7e-67 260.0 230 64.3
arahy.Tifrunner.gnm1.ann1.NRJ0Q8 Arachis hypogaea HOM05D007059 ORTHO05D009155 1.6e-65 253.4 221 63.3
arahy.Tifrunner.gnm1.ann1.PC0HA4 Arachis hypogaea HOM05D007059 ORTHO05D009155 1.6e-65 253.4 221 63.3
AL3G33460 Arabidopsis lyrata HOM05D007059 ORTHO05D009155 2.7e-65 252.7 226 60.6
CARHR095430 Cardamine hirsuta HOM05D007059 ORTHO05D009155 1.0e-64 250.8 226 60.6
BcaC09g48947 Brassica carinata HOM05D007059 ORTHO05D009155 1.3e-64 250.4 237 60.8
C01p44250 Brassica napus HOM05D007059 ORTHO05D009155 1.3e-64 250.4 237 60.8
BolC1t04385H Brassica oleracea HOM05D007059 ORTHO05D009155 1.3e-64 250.4 237 60.8
Sed0015909 Sechium edule HOM05D007059 ORTHO05D009155 1.8e-64 250.0 231 60.6
Sp3g17910 Schrenkiella parvula HOM05D007059 ORTHO05D009155 8.7e-64 247.7 226 60.6
Carub.0003s1980 Capsella rubella HOM05D007059 ORTHO05D009155 1.9e-63 246.5 230 60.0
Thhalv10021482m.g Eutrema salsugineum HOM05D007059 ORTHO05D009155 1.9e-63 246.5 226 59.7
unitig_27.g25281 Utricularia gibba HOM05D007059 ORTHO05D009155 9.6e-63 244.2 234 58.5
CANSAT35G1437 Cannabis sativa HOM05D007059 ORTHO05D009155 1.6e-62 243.4 141 83.7
EL10Ac9g22903 Beta vulgaris HOM05D007059 ORTHO05D009155 2.8e-62 242.7 226 58.8
HPP92_002491 Vanilla planifolia HOM05D007059 ORTHO05D009155 3.7e-62 242.3 156 75.0
HPP92_002544 Vanilla planifolia HOM05D007059 ORTHO05D009155 3.7e-62 242.3 156 75.0
AUR62017646 Chenopodium quinoa HOM05D007059 ORTHO05D009155 8.1e-62 241.1 229 59.4
AUR62012864 Chenopodium quinoa HOM05D007059 ORTHO05D009155 3.1e-61 239.2 226 57.5
A01p34850 Brassica napus HOM05D007059 ORTHO05D009155 4.0e-61 238.8 237 59.9
BraA01t03568Z Brassica rapa HOM05D007059 ORTHO05D009155 4.0e-61 238.8 237 59.9
Dinv01917 Davidia involucrata HOM05D007059 ORTHO05D009155 1.2e-60 237.3 226 59.7
Aa31LG8G6740 Aethionema arabicum HOM05D007059 ORTHO05D009155 1.5e-60 236.9 128 88.3
Cpa.g.sc298.2 Carica papaya HOM05D007059 ORTHO05D009155 5.8e-60 235.0 219 58.4
ATR0124G031 Amborella trichopoda HOM05D007059 ORTHO05D009155 1.7e-59 233.4 138 79.7
Migut.E00613 Erythranthe guttata HOM05D007059 ORTHO05D009155 1.2e-57 227.3 213 57.7
Oeu027905.1 Olea europaea HOM05D007059 ORTHO05D009155 1.0e-56 224.2 154 77.3
Zm00001eb259420 Zea mays HOM05D007059 ORTHO05D009155 3.9e-56 222.2 126 83.3
Hund08500 Selenicereus undatus HOM05D007059 ORTHO05D009155 2.8e-54 216.1 210 56.2
Pp3c2_14430 Physcomitrium patens HOM05D007059 ORTHO05D009155 4.8e-54 215.3 166 65.7
AagrBONN_evm.TU.Sc2ySwM_344.1288 Anthoceros agrestis HOM05D007059 ORTHO05D009155 3.4e-52 209.1 168 63.1
THA.LOC104801903 Tarenaya hassleriana HOM05D007059 ORTHO05D009155 3.8e-51 205.7 205 57.1
Actinidia13703 Actinidia chinensis HOM05D007059 ORTHO05D009155 8.4e-51 204.5 167 67.7
DCAR_023442 Daucus carota HOM05D007059 ORTHO05D008600 8.4e-51 204.5 140 74.3
SMO114G0039 Selaginella moellendorffii HOM05D007059 ORTHO05D009155 2.5e-50 203.0 125 78.4
Pp3c10_16080 Physcomitrium patens HOM05D007059 ORTHO05D009155 1.2e-49 200.7 151 65.6
SGA_v2.0_scaffold88G27235 Striga asiatica HOM05D007059 ORTHO05D009155 2.1e-49 199.9 128 77.3
PGR031G0357 Punica granatum HOM05D007059 ORTHO05D009155 1.3e-48 197.2 227 51.1
Mapoly0055s0010 Marchantia polymorpha HOM05D007059 ORTHO05D009155 1.5e-47 193.7 147 64.6
CDE04G0067 Ceratophyllum demersum HOM05D007059 ORTHO05D009155 2.0e-36 156.8 131 65.6
CBR_g48375 Chara braunii HOM05D007059 ORTHO05D009155 8.5e-35 151.4 122 57.4
CsaV3_5G013210 Cucumis sativus L. HOM05D007059 ORTHO05D009155 2.7e-33 146.4 177 48.6
AT3G19900 Arabidopsis thaliana HOM05D007059 ORTHO05D009155 2.5e-26 123.2 159 47.8
Actinidia14379 Actinidia chinensis HOM05D007059 ORTHO05D009155 7.2e-26 121.7 164 47.6
BolC5t33201H Brassica oleracea HOM05D007059 ORTHO05D009155 4.8e-22 109.0 84 69.0
SEGI_27177 Sequoiadendron giganteum HOM05D007059 ORTHO05D009155 3.8e-19 99.4 61 75.4
Cre01.g007050 Chlamydomonas reinhardtii HOM05D007059 ORTHO05D009155 5.5e-18 95.5 142 38.7
SMO364G0884 Selaginella moellendorffii HOM05D007059 ORTHO05D009155 1.0e-16 91.3 67 68.7
Cre03.g197850 Chlamydomonas reinhardtii HOM05D007059 ORTHO05D034487 1.8e-13 80.5 165 30.9
BraA05t21808Z Brassica rapa HOM05D007059 ORTHO05D040342 1.0e-11 74.7 45 82.2
Hma1.2p1_0232F.1_g097690 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 1.7e-11 73.9 106 43.4
A05p29230 Brassica napus HOM05D007059 ORTHO05D040342 8.5e-11 71.6 45 80.0
MCO14G049 Micromonas commoda HOM05D007059 ORTHO05D009155 4.7e-09 65.9 101 34.7


User provided reference genes

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