Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038019 Camellia sinensis var. sinensis HOM05D016091 ORTHO05D001529 3.9e-73 278.1 146 100.0
CSS0020260 Camellia sinensis var. sinensis HOM05D001589 ORTHO05D001529 4.0e-46 188.3 101 98.0
Actinidia12612 Actinidia chinensis HOM05D001589 ORTHO05D001529 4.8e-31 138.3 102 75.5
Dinv13350 Davidia involucrata HOM05D001589 ORTHO05D001529 4.5e-29 131.7 105 75.2
Hma1.2p1_0713F.1_g207820 Hydrangea macrophylla HOM05D001589 ORTHO05D001529 6.7e-25 117.9 105 63.8
TAR626G1952 Trochodendron aralioides HOM05D001589 ORTHO05D001529 3.1e-22 109.0 101 65.3
Lj8A144T70 Lonicera japonica HOM05D001589 ORTHO05D001529 3.4e-21 105.5 94 61.7
Sc16g0007800 Simmondsia chinensis HOM05D001589 ORTHO05D001529 3.8e-20 102.1 105 61.0
Ciclev10022321m.g Citrus clementina HOM05D001589 ORTHO05D001529 1.2e-18 97.1 103 58.3
Nitab4.5_0003618g0050 Nicotiana tabacum HOM05D001589 ORTHO05D001529 1.2e-18 97.1 97 59.8
CiPaw.11G154500 Carya illinoinensis HOM05D001589 ORTHO05D001529 2.3e-17 92.8 105 56.2
Hund10393 Selenicereus undatus HOM05D001589 ORTHO05D001529 5.2e-17 91.7 103 54.4
vmacro11985 Vaccinium macrocarpon HOM05D001589 ORTHO05D001529 5.2e-17 91.7 143 46.2
CARHR043960 Cardamine hirsuta HOM05D001589 ORTHO05D001529 8.8e-17 90.9 99 55.6
Haze_08451 Corylus avellana HOM05D001589 ORTHO05D001529 2.0e-16 89.7 101 56.4
Sopen07g030320 Solanum pennellii HOM05D001589 ORTHO05D001529 2.0e-16 89.7 99 55.6
PGR083G1294 Punica granatum HOM05D001589 ORTHO05D001529 3.3e-16 89.0 65 72.3
AL1G62340 Arabidopsis lyrata HOM05D001589 ORTHO05D001529 5.7e-16 88.2 99 55.6
Eucgr.F01375 Eucalyptus grandis HOM05D001589 ORTHO05D001529 5.7e-16 88.2 89 59.6
Manes.03G090600 Manihot esculenta HOM05D001589 ORTHO05D001529 5.7e-16 88.2 65 70.8
Nn3g20898 Nelumbo nucifera HOM05D001589 ORTHO05D001529 5.7e-16 88.2 104 57.7
AT1G53670 Arabidopsis thaliana HOM05D001589 ORTHO05D001529 9.7e-16 87.4 90 56.7
Thecc.07G148600 Theobroma cacao HOM05D001589 ORTHO05D001529 9.7e-16 87.4 99 55.6
Oeu050684.1 Olea europaea HOM05D001589 ORTHO05D001529 3.7e-15 85.5 87 56.3
Nitab4.5_0001140g0130 Nicotiana tabacum HOM05D001589 ORTHO05D001529 4.8e-15 85.1 93 55.9
Aa31LG10G1590 Aethionema arabicum HOM05D001589 ORTHO05D001529 6.3e-15 84.7 102 52.9
Solyc07g062060.3 Solanum lycopersicum HOM05D001589 ORTHO05D001529 8.2e-15 84.3 109 52.3
MSTRG.14991 Avicennia marina HOM05D001589 ORTHO05D001529 1.8e-14 83.2 110 49.1
AUR62019677 Chenopodium quinoa HOM05D001589 ORTHO05D001529 1.8e-14 83.2 105 48.6
AUR62013936 Chenopodium quinoa HOM05D001589 ORTHO05D001529 2.4e-14 82.8 104 50.0
QL08p023026 Quercus lobata HOM05D001589 ORTHO05D001529 2.4e-14 82.8 55 78.2
Sp1g40200 Schrenkiella parvula HOM05D001589 ORTHO05D001529 2.4e-14 82.8 91 57.1
TWI77G0954 Tripterygium wilfordii HOM05D001589 ORTHO05D001529 2.4e-14 82.8 97 54.6
CsaV3_4G032740 Cucumis sativus L. HOM05D001589 ORTHO05D001529 3.1e-14 82.4 112 52.7
Gohir.A08G233400 Gossypium hirsutum HOM05D001589 ORTHO05D001529 3.1e-14 82.4 103 53.4
Carub.0001s4294 Capsella rubella HOM05D001589 ORTHO05D001529 4.1e-14 82.0 100 54.0
MBI07_g07815_MAGBIO Magnolia biondii HOM05D001589 ORTHO05D001529 4.1e-14 82.0 76 65.8
CSS0037799 Camellia sinensis var. sinensis HOM05D016091 ORTHO05D109682 5.3e-14 81.6 48 79.2
Peaxi162Scf00111g01226 Petunia axillaris HOM05D001589 ORTHO05D001529 5.3e-14 81.6 89 52.8
CANSAT56G0134 Cannabis sativa HOM05D001589 ORTHO05D001529 7.0e-14 81.3 105 53.3
THA.LOC104810406 Tarenaya hassleriana HOM05D001589 ORTHO05D001529 9.1e-14 80.9 100 52.0
Cpa.g.sc77.105 Carica papaya HOM05D001589 ORTHO05D001529 1.2e-13 80.5 55 74.5
RhsimUnG0077000 Rhododendron simsii HOM05D001589 ORTHO05D001529 1.6e-13 80.1 55 76.4
GSVIVG01014075001 Vitis vinifera HOM05D001589 ORTHO05D001529 1.6e-13 80.1 56 80.4
Prupe.4G154300 Prunus persica HOM05D001589 ORTHO05D001529 2.6e-13 79.3 91 60.4
Atru.chr2.1823 Acer truncatum HOM05D001589 ORTHO05D001529 3.5e-13 79.0 94 54.3
A06p00880 Brassica napus HOM05D001589 ORTHO05D001529 3.5e-13 79.0 91 60.4
BraSC324t45964Z Brassica rapa HOM05D001589 ORTHO05D001529 3.5e-13 79.0 91 60.4
Rhsim06G0212900 Rhododendron simsii HOM05D001589 ORTHO05D001529 3.5e-13 79.0 55 72.7
Sabra11G0100400 Salix brachista HOM05D001589 ORTHO05D001529 3.5e-13 79.0 89 55.1
C06p09450 Brassica napus HOM05D001589 ORTHO05D001529 4.5e-13 78.6 102 55.9
BolC6t36016H Brassica oleracea HOM05D001589 ORTHO05D001529 4.5e-13 78.6 102 55.9
CSS0024889 Camellia sinensis var. sinensis HOM05D016091 ORTHO05D111677 4.5e-13 78.6 48 77.1
HanXRQChr15g0495351 Helianthus annuus HOM05D001589 ORTHO05D001529 1.0e-12 77.4 109 49.5
BcaC08g43548 Brassica carinata HOM05D001589 ORTHO05D001529 1.3e-12 77.0 92 57.6
Gohir.D08G253600 Gossypium hirsutum HOM05D001589 ORTHO05D001529 1.3e-12 77.0 111 47.7
Gorai.004G270500 Gossypium raimondii HOM05D001589 ORTHO05D001529 1.3e-12 77.0 111 47.7
FAN16G1305 Fragaria x ananassa HOM05D001589 ORTHO05D001529 2.2e-12 76.3 88 60.2
BcaB07g33310 Brassica carinata HOM05D001589 ORTHO05D001529 2.9e-12 75.9 91 56.0
CSS0039423 Camellia sinensis var. sinensis HOM05D016091 ORTHO05D113454 5.0e-12 75.1 48 75.0
CSS0020558 Camellia sinensis var. sinensis HOM05D016091 ORTHO05D111807 6.5e-12 74.7 45 75.6
Thhalv10012040m.g Eutrema salsugineum HOM05D001589 ORTHO05D001529 6.5e-12 74.7 63 65.1
FAN25G2003 Fragaria x ananassa HOM05D001589 ORTHO05D001529 6.5e-12 74.7 86 54.7
Lsat_1_v5_gn_7_100320 Lactuca sativa HOM05D001589 ORTHO05D001529 6.5e-12 74.7 110 49.1
SalBow8G0973 Salvia bowleyana HOM05D001589 ORTHO05D001529 6.5e-12 74.7 94 50.0
COL.COLO4_17392 Corchorus olitorius HOM05D001589 ORTHO05D001529 8.5e-12 74.3 58 67.2
Duzib187G0820 Durio zibethinus HOM05D001589 ORTHO05D001529 1.1e-11 73.9 94 53.2
Phvul.011G173000 Phaseolus vulgaris HOM05D001589 ORTHO05D001529 1.1e-11 73.9 72 66.7
SGA_v2.0_scaffold73G24376 Striga asiatica HOM05D001589 ORTHO05D001529 1.1e-11 73.9 110 44.5
VMungo1127G0572 Vigna mungo HOM05D001589 ORTHO05D001529 1.1e-11 73.9 72 68.1
Lalb_Chr03g0031391 Lupinus albus HOM05D001589 ORTHO05D001529 1.5e-11 73.6 109 50.5
RcHm_v2.0_Chr5g0051791 Rosa chinensis HOM05D001589 ORTHO05D001529 1.5e-11 73.6 87 56.3
Glyma.08G236000 Glycine max HOM05D001589 ORTHO05D001529 1.9e-11 73.2 74 63.5
HPP92_003910 Vanilla planifolia HOM05D001589 ORTHO05D001529 1.9e-11 73.2 57 66.7
PGSC0003DMG400007084 Solanum tuberosum HOM05D001589 ORTHO05D001529 2.5e-11 72.8 55 69.1
Ca_12746_v3 Cicer arietinum L. HOM05D001589 ORTHO05D001529 3.2e-11 72.4 71 59.2
Potri.011G114300 Populus trichocarpa HOM05D001589 ORTHO05D001529 3.2e-11 72.4 89 53.9
Aqoxy4G00142 Aquilegia oxysepala HOM05D001589 ORTHO05D001529 4.2e-11 72.0 90 51.1
FvH4_3g28950 Fragaria vesca HOM05D001589 ORTHO05D001529 4.2e-11 72.0 98 51.0
Sed0016813 Sechium edule HOM05D001589 ORTHO05D001529 4.2e-11 72.0 97 48.5
CDE02G1502 Ceratophyllum demersum HOM05D001589 ORTHO05D001529 9.4e-11 70.9 79 58.2
ECA236G3041 Erigeron canadensis HOM05D001589 ORTHO05D001529 1.6e-10 70.1 105 43.8
CSS0005712 Camellia sinensis var. sinensis HOM05D016091 ORTHO05D113381 2.1e-10 69.7 45 73.3
MD03G1251900 Malus domestica HOM05D001589 ORTHO05D001529 2.7e-10 69.3 93 51.6
CAN.G375.60 Capsicum annuum HOM05D001589 ORTHO05D001529 3.6e-10 68.9 55 67.3
Lj3g0024436 Lotus japonicus HOM05D001589 ORTHO05D001529 4.7e-10 68.6 67 62.7
arahy.Tifrunner.gnm1.ann1.X54UNA Arachis hypogaea HOM05D001589 ORTHO05D001529 8.0e-10 67.8 103 47.6
arahy.Tifrunner.gnm1.ann1.EFB7JN Arachis hypogaea HOM05D001589 ORTHO05D001529 1.4e-09 67.0 100 48.0
DCAR_017585 Daucus carota HOM05D001589 ORTHO05D001529 1.4e-09 67.0 113 46.0
PSO675G7432 Papaver somniferum HOM05D001589 ORTHO05D001529 3.0e-09 65.9 57 66.7
TPR.G722 Trifolium pratense HOM05D001589 ORTHO05D001529 4.0e-09 65.5 72 56.9
Cc05_g10560 Coffea canephora HOM05D001589 ORTHO05D001529 6.7e-09 64.7 55 63.6
PSO541G3834 Papaver somniferum HOM05D001589 ORTHO05D001529 6.7e-09 64.7 104 44.2
Medtr8g461030 Medicago truncatula HOM05D001589 ORTHO05D001529 7.5e-08 61.2 111 46.8
MELO3C016676.2 Cucumis melo HOM05D001589 ORTHO05D001529 1.3e-07 60.5 41 75.6
Zm00001eb280080 Zea mays HOM05D001589 ORTHO05D001529 1.3e-07 60.5 94 45.7
Psat4g135160 Pisum sativum HOM05D001589 ORTHO05D001529 2.8e-07 59.3 67 55.2
CSS0030974 Camellia sinensis var. sinensis HOM05D016091 ORTHO05D109840 4.8e-07 58.5 34 82.4
CDE02G3407 Ceratophyllum demersum HOM05D001589 ORTHO05D001529 8.2e-07 57.8 34 82.4
FAN11G0595 Fragaria x ananassa HOM05D001589 ORTHO05D001529 1.4e-06 57.0 80 47.5
Duzib213G0279 Durio zibethinus HOM05D001589 ORTHO05D001529 2.4e-06 56.2 33 78.8
Os06g0472000 Oryza sativa ssp. japonica HOM05D001589 ORTHO05D001529 4.1e-06 55.5 33 75.8
CSS0022014 Camellia sinensis var. sinensis HOM05D016091 ORTHO05D109961 9.1e-06 54.3 90 44.4


User provided reference genes

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