Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001831 Camellia sinensis var. sinensis HOM05D003337 ORTHO05D003808 5.8e-39 163.7 79 100.0
CSS0038017 Camellia sinensis var. sinensis HOM05D003337 ORTHO05D003808 5.8e-39 163.7 79 100.0
CSS0019032 Camellia sinensis var. sinensis HOM05D003337 ORTHO05D003808 1.6e-36 155.6 85 91.8
CSS0009940 Camellia sinensis var. sinensis HOM05D003337 ORTHO05D003808 3.4e-15 84.7 56 76.8
Lalb_Chr23g0268451 Lupinus albus HOM05D003337 ORTHO05D003808 1.9e-10 68.9 57 57.9
Migut.A00028 Erythranthe guttata HOM05D003337 ORTHO05D003808 5.6e-10 67.4 59 55.9
Oeu053108.1 Olea europaea HOM05D003337 ORTHO05D003808 7.4e-10 67.0 59 55.9
AUR62012417 Chenopodium quinoa HOM05D003337 ORTHO05D003808 9.6e-10 66.6 59 55.9
Manes.03G013300 Manihot esculenta HOM05D003337 ORTHO05D003808 9.6e-10 66.6 57 54.4
VMungo1309G0140 Vigna mungo HOM05D003337 ORTHO05D003808 9.6e-10 66.6 57 56.1
AUR62031541 Chenopodium quinoa HOM05D003337 ORTHO05D003808 1.3e-09 66.2 59 54.2
Lj7C724G9 Lonicera japonica HOM05D003337 ORTHO05D003808 1.3e-09 66.2 59 55.9
Phvul.009G091900 Phaseolus vulgaris HOM05D003337 ORTHO05D003808 1.3e-09 66.2 57 56.1
GSVIVG01035878001 Vitis vinifera HOM05D003337 ORTHO05D003808 2.8e-09 65.1 57 54.4
EL10Ac2g04195 Beta vulgaris HOM05D003337 ORTHO05D003808 3.7e-09 64.7 59 54.2
Cc08_g00460 Coffea canephora HOM05D003337 ORTHO05D003808 3.7e-09 64.7 58 55.2
arahy.Tifrunner.gnm1.ann1.C340QI Arachis hypogaea HOM05D003337 ORTHO05D003808 4.8e-09 64.3 57 52.6
arahy.Tifrunner.gnm1.ann1.EV8XFE Arachis hypogaea HOM05D003337 ORTHO05D003808 4.8e-09 64.3 57 52.6
MSTRG.26016 Avicennia marina HOM05D003337 ORTHO05D003808 4.8e-09 64.3 57 56.1
Medtr3g106700 Medicago truncatula HOM05D003337 ORTHO05D003808 4.8e-09 64.3 57 54.4
CiPaw.07G224800 Carya illinoinensis HOM05D003337 ORTHO05D003808 6.2e-09 63.9 57 56.1
COL.COLO4_18879 Corchorus olitorius HOM05D003337 ORTHO05D003808 6.2e-09 63.9 57 54.4
Lalb_Chr08g0244191 Lupinus albus HOM05D003337 ORTHO05D003808 6.2e-09 63.9 57 54.4
SalBow4G0163 Salvia bowleyana HOM05D003337 ORTHO05D003808 6.2e-09 63.9 59 54.2
unitig_748.g8275 Utricularia gibba HOM05D003337 ORTHO05D003808 8.1e-09 63.5 59 54.2
Aqoxy7G02409 Aquilegia oxysepala HOM05D003337 ORTHO05D003808 1.1e-08 63.2 57 52.6
Ciclev10007238m.g Citrus clementina HOM05D003337 ORTHO05D003808 1.1e-08 63.2 57 52.6
Lj1g0009523 Lotus japonicus HOM05D003337 ORTHO05D003808 1.1e-08 63.2 57 52.6
MBI14_g37827_MAGBIO Magnolia biondii HOM05D003337 ORTHO05D003808 1.1e-08 63.2 57 54.4
Manes.16G123500 Manihot esculenta HOM05D003337 ORTHO05D003808 1.1e-08 63.2 57 52.6
Nn8g39563 Nelumbo nucifera HOM05D003337 ORTHO05D003808 1.1e-08 63.2 58 55.2
ClCG05G016760 Citrullus lanatus HOM05D003337 ORTHO05D003808 1.4e-08 62.8 57 54.4
Potri.018G025600 Populus trichocarpa HOM05D003337 ORTHO05D003808 1.4e-08 62.8 57 54.4
Hund25887 Selenicereus undatus HOM05D003337 ORTHO05D003808 1.4e-08 62.8 59 55.9
SGA_v2.0_scaffold64G21955 Striga asiatica HOM05D003337 ORTHO05D003808 1.4e-08 62.8 59 52.5
TAR636G2033 Trochodendron aralioides HOM05D003337 ORTHO05D003808 1.4e-08 62.8 59 54.2
Psat5g029560 Pisum sativum HOM05D003337 ORTHO05D003808 1.8e-08 62.4 57 52.6
TAR625G0257 Trochodendron aralioides HOM05D003337 ORTHO05D003808 1.8e-08 62.4 58 53.4
vmacro11183 Vaccinium macrocarpon HOM05D003337 ORTHO05D003808 1.8e-08 62.4 57 54.4
Cpa.g.sc217.15 Carica papaya HOM05D003337 ORTHO05D003808 2.4e-08 62.0 56 53.6
DCAR_001543 Daucus carota HOM05D003337 ORTHO05D003808 2.4e-08 62.0 59 52.5
Duzib168G1956 Durio zibethinus HOM05D003337 ORTHO05D003808 2.4e-08 62.0 57 52.6
Glyma.04G065500 Glycine max HOM05D003337 ORTHO05D003808 2.4e-08 62.0 57 50.9
Nn2g12124 Nelumbo nucifera HOM05D003337 ORTHO05D003808 2.4e-08 62.0 58 53.4
Nitab4.5_0002042g0010 Nicotiana tabacum HOM05D003337 ORTHO05D003808 2.4e-08 62.0 56 51.8
Nitab4.5_0004664g0060 Nicotiana tabacum HOM05D003337 ORTHO05D003808 2.4e-08 62.0 56 50.0
Peaxi162Scf00136g02012 Petunia axillaris HOM05D003337 ORTHO05D003808 2.4e-08 62.0 56 51.8
TPR.G3117 Trifolium pratense HOM05D003337 ORTHO05D003808 2.4e-08 62.0 57 52.6
Ah.16g104580 Amaranthus hybridus HOM05D003337 ORTHO05D003808 3.1e-08 61.6 59 50.8
Haze_21497 Corylus avellana HOM05D003337 ORTHO05D003808 3.1e-08 61.6 57 54.4
Dinv18205 Davidia involucrata HOM05D003337 ORTHO05D003808 3.1e-08 61.6 59 52.5
Dinv41471 Davidia involucrata HOM05D003337 ORTHO05D003808 3.1e-08 61.6 58 58.6
Duzib187G1394 Durio zibethinus HOM05D003337 ORTHO05D003808 3.1e-08 61.6 57 54.4
Glyma.06G066900 Glycine max HOM05D003337 ORTHO05D003808 3.1e-08 61.6 57 50.9
Rhsim02G0202500 Rhododendron simsii HOM05D003337 ORTHO05D003808 3.1e-08 61.6 57 52.6
Sed0015158 Sechium edule HOM05D003337 ORTHO05D003808 3.1e-08 61.6 57 52.6
MELO3C003713.2 Cucumis melo HOM05D003337 ORTHO05D003808 4.0e-08 61.2 57 50.9
CsaV3_3G046270 Cucumis sativus L. HOM05D003337 ORTHO05D003808 4.0e-08 61.2 57 50.9
Dinv05003 Davidia involucrata HOM05D003337 ORTHO05D003808 4.0e-08 61.2 59 52.5
HanXRQChr05g0134851 Helianthus annuus HOM05D003337 ORTHO05D003808 4.0e-08 61.2 54 51.9
Lalb_Chr11g0063671 Lupinus albus HOM05D003337 ORTHO05D003808 4.0e-08 61.2 56 51.8
QL02p021300 Quercus lobata HOM05D003337 ORTHO05D003808 4.0e-08 61.2 57 52.6
TWI34G0528 Tripterygium wilfordii HOM05D003337 ORTHO05D003808 4.0e-08 61.2 59 50.8
FAN24G1139 Fragaria x ananassa HOM05D003337 ORTHO05D003808 5.3e-08 60.8 57 52.6
Gohir.A05G055900 Gossypium hirsutum HOM05D003337 ORTHO05D003808 5.3e-08 60.8 57 52.6
Gorai.009G059100 Gossypium raimondii HOM05D003337 ORTHO05D003808 5.3e-08 60.8 57 52.6
Potri.006G256400 Populus trichocarpa HOM05D003337 ORTHO05D003808 5.3e-08 60.8 60 50.0
FAN20G0291 Fragaria x ananassa HOM05D003337 ORTHO05D003808 6.9e-08 60.5 57 52.6
Hma1.2p1_2800F.1_g328770 Hydrangea macrophylla HOM05D003337 ORTHO05D003808 6.9e-08 60.5 58 51.7
Lsat_1_v5_gn_5_30121 Lactuca sativa HOM05D003337 ORTHO05D003808 6.9e-08 60.5 54 53.7
Sc09g0010250 Simmondsia chinensis HOM05D003337 ORTHO05D003808 6.9e-08 60.5 59 54.2
HPP92_010004 Vanilla planifolia HOM05D003337 ORTHO05D003808 6.9e-08 60.5 56 50.0
CiPaw.08G010200 Carya illinoinensis HOM05D003337 ORTHO05D003808 9.0e-08 60.1 57 50.9
FvH4_2g28850 Fragaria vesca HOM05D003337 ORTHO05D003808 9.0e-08 60.1 57 52.6
FAN27G2849 Fragaria x ananassa HOM05D003337 ORTHO05D003808 9.0e-08 60.1 57 52.6
Gohir.A05G055800 Gossypium hirsutum HOM05D003337 ORTHO05D003808 9.0e-08 60.1 57 52.6
Gohir.D05G057900 Gossypium hirsutum HOM05D003337 ORTHO05D003808 9.0e-08 60.1 57 52.6
Gorai.009G059000 Gossypium raimondii HOM05D003337 ORTHO05D003808 9.0e-08 60.1 57 52.6
Prupe.1G482800 Prunus persica HOM05D003337 ORTHO05D003808 9.0e-08 60.1 57 52.6
RcHm_v2.0_Chr6g0297611 Rosa chinensis HOM05D003337 ORTHO05D003808 9.0e-08 60.1 57 52.6
Thecc.09G022400 Theobroma cacao HOM05D003337 ORTHO05D003808 9.0e-08 60.1 57 52.6
Gohir.D05G058000 Gossypium hirsutum HOM05D003337 ORTHO05D003808 1.2e-07 59.7 57 50.9
Sabra18G0028200 Salix brachista HOM05D003337 ORTHO05D003808 1.2e-07 59.7 57 50.9
TAR383G0794 Trochodendron aralioides HOM05D003337 ORTHO05D003808 1.2e-07 59.7 58 50.0
CAN.G130.8 Capsicum annuum HOM05D003337 ORTHO05D003808 1.5e-07 59.3 56 51.8
Hma1.2p1_0243F.1_g101010 Hydrangea macrophylla HOM05D003337 ORTHO05D003808 1.5e-07 59.3 56 51.8
ATR0739G172 Amborella trichopoda HOM05D003337 ORTHO05D003808 2.0e-07 58.9 58 51.7
ECA246G2127 Erigeron canadensis HOM05D003337 ORTHO05D003808 2.0e-07 58.9 54 48.1
MD15G1127100 Malus domestica HOM05D003337 ORTHO05D003808 2.6e-07 58.5 57 50.9
FAN15G2120 Fragaria x ananassa HOM05D003337 ORTHO05D003808 3.4e-07 58.2 57 50.9
Sp4g04460 Schrenkiella parvula HOM05D003337 ORTHO05D003808 3.4e-07 58.2 57 45.6
TWI32G1054 Tripterygium wilfordii HOM05D003337 ORTHO05D003808 3.4e-07 58.2 57 49.1
CSS0014408 Camellia sinensis var. sinensis HOM05D003337 ORTHO05D003808 5.8e-07 57.4 57 47.4
CSS0019364 Camellia sinensis var. sinensis HOM05D003337 ORTHO05D003808 5.8e-07 57.4 57 47.4
MD08G1156500 Malus domestica HOM05D003337 ORTHO05D003808 7.6e-07 57.0 57 50.9
Sopen06g008090 Solanum pennellii HOM05D003337 ORTHO05D003808 7.6e-07 57.0 56 50.0
Atru.chr7.2458 Acer truncatum HOM05D003337 ORTHO05D003808 9.9e-07 56.6 57 49.1
Carub.0004s0499 Capsella rubella HOM05D003337 ORTHO05D003808 9.9e-07 56.6 55 49.1
Nitab4.5_0000165g0080 Nicotiana tabacum HOM05D003337 ORTHO05D003808 9.9e-07 56.6 56 50.0
Nitab4.5_0001294g0060 Nicotiana tabacum HOM05D003337 ORTHO05D003808 9.9e-07 56.6 56 50.0
AL4G16700 Arabidopsis lyrata HOM05D003337 ORTHO05D003808 1.3e-06 56.2 55 47.3
SEGI_23839 Sequoiadendron giganteum HOM05D003337 ORTHO05D003808 1.3e-06 56.2 58 46.6
SEGI_27956 Sequoiadendron giganteum HOM05D003337 ORTHO05D003808 1.3e-06 56.2 58 46.6
PSO170G2416 Papaver somniferum HOM05D003337 ORTHO05D003808 1.7e-06 55.8 56 50.0
BcaB08g35177 Brassica carinata HOM05D003337 ORTHO05D003808 2.9e-06 55.1 57 43.9
A09p55690 Brassica napus HOM05D003337 ORTHO05D003808 3.8e-06 54.7 57 43.9
BraA09t40970Z Brassica rapa HOM05D003337 ORTHO05D003808 3.8e-06 54.7 57 43.9
A04p19680 Brassica napus HOM05D003337 ORTHO05D003808 4.9e-06 54.3 57 42.1
BraA04t17558Z Brassica rapa HOM05D003337 ORTHO05D003808 4.9e-06 54.3 57 42.1
BcaC07g40870 Brassica carinata HOM05D003337 ORTHO05D003808 6.4e-06 53.9 57 43.9
C08p38690 Brassica napus HOM05D003337 ORTHO05D003808 6.4e-06 53.9 57 43.9
BolC8t51439H Brassica oleracea HOM05D003337 ORTHO05D003808 6.4e-06 53.9 57 43.9
CARHR116200 Cardamine hirsuta HOM05D003337 ORTHO05D003808 6.4e-06 53.9 57 45.6
AT2G25320 Arabidopsis thaliana HOM05D003337 ORTHO05D003808 8.4e-06 53.5 55 45.5
BcaB06g28056 Brassica carinata HOM05D003337 ORTHO05D003808 8.4e-06 53.5 57 40.4
PSO017G4016 Papaver somniferum HOM05D003337 ORTHO05D003808 8.4e-06 53.5 56 48.2
Sabra06G0200600 Salix brachista HOM05D003337 ORTHO05D003808 8.4e-06 53.5 57 47.4


User provided reference genes

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