Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038008 Camellia sinensis var. sinensis HOM05D000874 ORTHO05D017380 3.1e-131 471.9 243 100.0
vmacro18143 Vaccinium macrocarpon HOM05D000874 ORTHO05D001049 5.7e-45 185.3 293 45.4
Rhsim08G0075500 Rhododendron simsii HOM05D000874 ORTHO05D001049 5.5e-40 168.7 293 42.0
Actinidia17590 Actinidia chinensis HOM05D000874 ORTHO05D001049 4.7e-39 165.6 110 74.5
Dinv34933 Davidia involucrata HOM05D000874 ORTHO05D001049 8.3e-28 128.3 231 38.1
Ciclev10013325m.g Citrus clementina HOM05D000874 ORTHO05D001049 3.4e-13 79.7 71 54.9
Cfa007680 Carpinus fangiana HOM05D000874 ORTHO05D001049 1.4e-11 74.3 65 55.4
TAR629G3315 Trochodendron aralioides HOM05D000874 ORTHO05D017380 2.0e-10 70.5 104 46.2
CiPaw.03G087800 Carya illinoinensis HOM05D000874 ORTHO05D001049 7.8e-10 68.6 56 58.9
CANSAT64G0133 Cannabis sativa HOM05D000874 ORTHO05D001049 1.0e-09 68.2 57 57.9
DCAR_025440 Daucus carota HOM05D000874 ORTHO05D001049 1.0e-09 68.2 100 38.0
Sed0009455 Sechium edule HOM05D000874 ORTHO05D001049 1.0e-09 68.2 64 50.0
Atru.chr8.481 Acer truncatum HOM05D000874 ORTHO05D001049 1.3e-09 67.8 53 62.3
AUR62030089 Chenopodium quinoa HOM05D000874 ORTHO05D001049 3.0e-09 66.6 145 32.4
Lalb_Chr02g0158871 Lupinus albus HOM05D000874 ORTHO05D001049 3.0e-09 66.6 101 37.6
Cc07_g04330 Coffea canephora HOM05D000874 ORTHO05D001049 5.0e-09 65.9 58 62.1
MELO3C032452.2 Cucumis melo HOM05D000874 ORTHO05D001049 6.6e-09 65.5 70 42.9
Oeu025533.1 Olea europaea HOM05D000874 ORTHO05D001049 6.6e-09 65.5 78 46.2
Hund30250 Selenicereus undatus HOM05D000874 ORTHO05D001049 6.6e-09 65.5 102 37.3
Hund30251 Selenicereus undatus HOM05D000874 ORTHO05D001049 6.6e-09 65.5 102 37.3
TWI32G0665 Tripterygium wilfordii HOM05D000874 ORTHO05D001049 6.6e-09 65.5 74 44.6
ClCG07G016520 Citrullus lanatus HOM05D000874 ORTHO05D001049 8.6e-09 65.1 67 47.8
Eucgr.J01384 Eucalyptus grandis HOM05D000874 ORTHO05D001049 8.6e-09 65.1 48 68.8
MD09G1068500 Malus domestica HOM05D000874 ORTHO05D001049 8.6e-09 65.1 84 42.9
PGR042G1772 Punica granatum HOM05D000874 ORTHO05D001049 8.6e-09 65.1 44 70.5
Hund30138 Selenicereus undatus HOM05D000874 ORTHO05D001049 8.6e-09 65.1 102 37.3
Hund30139 Selenicereus undatus HOM05D000874 ORTHO05D001049 8.6e-09 65.1 102 37.3
AUR62038217 Chenopodium quinoa HOM05D000874 ORTHO05D001049 1.5e-08 64.3 144 31.2
QL02p067387 Quercus lobata HOM05D000874 ORTHO05D001049 1.5e-08 64.3 255 28.6
ECA246G4580 Erigeron canadensis HOM05D000874 ORTHO05D001049 1.9e-08 63.9 58 50.0
Glyma.19G031600 Glycine max HOM05D000874 ORTHO05D001049 1.9e-08 63.9 85 40.0
Sc14g0006370 Simmondsia chinensis HOM05D000874 ORTHO05D001049 1.9e-08 63.9 125 35.2
Glyma.13G055600 Glycine max HOM05D000874 ORTHO05D001049 4.3e-08 62.8 85 38.8
Lj1g0025553 Lotus japonicus HOM05D000874 ORTHO05D001049 1.2e-07 61.2 54 51.9
Solyc02g065790.3 Solanum lycopersicum HOM05D000874 ORTHO05D001049 1.6e-07 60.8 35 80.0
Oeu025532.3 Olea europaea HOM05D000874 ORTHO05D001049 2.1e-07 60.5 75 44.0
Peaxi162Scf00991g00113 Petunia axillaris HOM05D000874 ORTHO05D001049 2.8e-07 60.1 36 77.8
Phvul.004G037900 Phaseolus vulgaris HOM05D000874 ORTHO05D001049 2.8e-07 60.1 84 36.9
Prupe.3G252300 Prunus persica HOM05D000874 ORTHO05D001049 2.8e-07 60.1 64 46.9
Sopen02g016030 Solanum pennellii HOM05D000874 ORTHO05D001049 3.6e-07 59.7 35 77.1
EL10Ac3g06049 Beta vulgaris HOM05D000874 ORTHO05D001049 4.7e-07 59.3 140 27.1
Lju41C2T8 Lonicera japonica HOM05D000874 ORTHO05D001049 4.7e-07 59.3 34 76.5
BcaC04g23833 Brassica carinata HOM05D000874 ORTHO05D001049 6.2e-07 58.9 96 42.7
Lsat_1_v5_gn_3_96140 Lactuca sativa HOM05D000874 ORTHO05D001049 8.0e-07 58.5 38 73.7
PGSC0003DMG400026552 Solanum tuberosum HOM05D000874 ORTHO05D001049 8.0e-07 58.5 35 74.3
MSTRG.23878 Avicennia marina HOM05D000874 ORTHO05D001049 1.1e-06 58.2 71 36.6
FAN13G1125 Fragaria x ananassa HOM05D000874 ORTHO05D001049 1.1e-06 58.2 63 47.6
Peaxi162Scf00991g00016 Petunia axillaris HOM05D000874 ORTHO05D001049 1.4e-06 57.8 35 77.1
Psat0s4383g0040 Pisum sativum HOM05D000874 ORTHO05D001049 1.4e-06 57.8 38 65.8
arahy.Tifrunner.gnm1.ann1.87W1E2 Arachis hypogaea HOM05D000874 ORTHO05D001049 1.8e-06 57.4 38 65.8
FvH4_5g13671 Fragaria vesca HOM05D000874 ORTHO05D001049 1.8e-06 57.4 63 47.6
FAN18G0264 Fragaria x ananassa HOM05D000874 ORTHO05D001267 1.8e-06 57.4 63 47.6
Medtr7g015180 Medicago truncatula HOM05D000874 ORTHO05D001049 1.8e-06 57.4 45 55.6
Ah.13g073700 Amaranthus hybridus HOM05D000874 ORTHO05D001049 2.3e-06 57.0 144 29.2
arahy.Tifrunner.gnm1.ann1.D19DHE Arachis hypogaea HOM05D000874 ORTHO05D001049 2.3e-06 57.0 38 65.8
Hma1.2p1_0060F.1_g032970 Hydrangea macrophylla HOM05D000874 ORTHO05D001049 2.3e-06 57.0 92 43.5
Lj2g0001379 Lotus japonicus HOM05D000874 ORTHO05D001049 2.3e-06 57.0 85 41.2
Nitab4.5_0000212g0290 Nicotiana tabacum HOM05D000874 ORTHO05D001049 2.3e-06 57.0 35 74.3
MD17G1061400 Malus domestica HOM05D000874 ORTHO05D001049 3.1e-06 56.6 140 32.1
CAN.G93.56 Capsicum annuum HOM05D000874 ORTHO05D001049 4.0e-06 56.2 35 74.3
FAN08G0155 Fragaria x ananassa HOM05D000874 ORTHO05D001267 4.0e-06 56.2 58 51.7
Oeu062169.2 Olea europaea HOM05D000874 ORTHO05D001049 4.0e-06 56.2 222 29.3
TAR371G0757 Trochodendron aralioides HOM05D000874 ORTHO05D001049 4.0e-06 56.2 158 31.6
Dinv22768 Davidia involucrata HOM05D000874 ORTHO05D001049 6.8e-06 55.5 58 48.3
VMungo0695G0001 Vigna mungo HOM05D000874 ORTHO05D001049 6.8e-06 55.5 39 59.0
BcaB04g19518 Brassica carinata HOM05D000874 ORTHO05D001049 8.9e-06 55.1 121 38.8
Nn4g23457 Nelumbo nucifera HOM05D000874 ORTHO05D001049 8.9e-06 55.1 240 27.1
QL10p019915 Quercus lobata HOM05D000874 ORTHO05D001049 8.9e-06 55.1 61 45.9
VMungo0464G1171 Vigna mungo HOM05D000874 ORTHO05D001049 8.9e-06 55.1 53 49.1


User provided reference genes

Program Settings