Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038002 Camellia sinensis var. sinensis HOM05D007415 ORTHO05D009324 7.0e-150 533.9 260 100.0
CSS0018954 Camellia sinensis var. sinensis HOM05D007415 ORTHO05D009324 7.5e-120 434.1 268 83.2
Dinv02951 Davidia involucrata HOM05D007415 ORTHO05D009324 3.8e-111 405.2 260 73.5
Actinidia23816 Actinidia chinensis HOM05D007415 ORTHO05D009324 2.8e-106 389.0 264 72.3
vmacro14670 Vaccinium macrocarpon HOM05D007415 ORTHO05D009324 3.5e-101 372.1 263 71.9
Rhsim01G0246200 Rhododendron simsii HOM05D007415 ORTHO05D009324 3.3e-99 365.5 259 71.0
Manes.12G058800 Manihot esculenta HOM05D007415 ORTHO05D009324 1.3e-95 353.6 251 69.3
Oeu058216.1 Olea europaea HOM05D007415 ORTHO05D009324 1.2e-93 347.1 261 65.9
Cfa006296 Carpinus fangiana HOM05D007415 ORTHO05D009324 3.0e-92 342.4 261 64.4
Thecc.01G204000 Theobroma cacao HOM05D007415 ORTHO05D009324 3.9e-92 342.0 250 67.6
Lsat_1_v5_gn_9_15740 Lactuca sativa HOM05D007415 ORTHO05D009324 7.4e-91 337.8 259 60.2
CiPaw.07G119000 Carya illinoinensis HOM05D007415 ORTHO05D009324 2.1e-90 336.3 257 64.2
Ciclev10016323m.g Citrus clementina HOM05D007415 ORTHO05D009324 2.6e-88 329.3 254 63.4
Gohir.D07G201100 Gossypium hirsutum HOM05D007415 ORTHO05D009324 4.5e-88 328.6 252 63.5
Gorai.001G225800 Gossypium raimondii HOM05D007415 ORTHO05D009324 4.5e-88 328.6 252 63.5
Atru.chr6.3473 Acer truncatum HOM05D007415 ORTHO05D009324 1.7e-87 326.6 264 63.6
Cc01_g15740 Coffea canephora HOM05D007415 ORTHO05D009324 2.4e-86 322.8 263 60.5
Sopen09g012680 Solanum pennellii HOM05D007415 ORTHO05D009324 7.1e-86 321.2 260 61.2
Solyc09g018950.3 Solanum lycopersicum HOM05D007415 ORTHO05D009324 2.7e-85 319.3 260 61.2
COL.COLO4_19724 Corchorus olitorius HOM05D007415 ORTHO05D009324 4.6e-85 318.5 250 62.0
MSTRG.21289 Avicennia marina HOM05D007415 ORTHO05D009324 6.0e-85 318.2 261 60.2
Migut.D00758 Erythranthe guttata HOM05D007415 ORTHO05D009324 1.0e-84 317.4 261 60.2
Prupe.8G267300 Prunus persica HOM05D007415 ORTHO05D009324 1.8e-84 316.6 261 60.9
Potri.014G197700 Populus trichocarpa HOM05D007415 ORTHO05D009324 3.0e-84 315.8 262 61.5
MD03G1298900 Malus domestica HOM05D007415 ORTHO05D009324 8.7e-84 314.3 252 61.5
Eucgr.K02344 Eucalyptus grandis HOM05D007415 ORTHO05D009324 7.4e-83 311.2 250 59.2
Nitab4.5_0011643g0030 Nicotiana tabacum HOM05D007415 ORTHO05D009324 7.4e-83 311.2 260 60.0
MD11G1318200 Malus domestica HOM05D007415 ORTHO05D009324 9.6e-83 310.8 252 61.1
CsaV3_1G007790 Cucumis sativus L. HOM05D007415 ORTHO05D009324 3.7e-82 308.9 255 60.0
PGR044G2664 Punica granatum HOM05D007415 ORTHO05D009324 4.8e-82 308.5 264 59.5
MELO3C002194.2 Cucumis melo HOM05D007415 ORTHO05D009324 8.2e-82 307.8 253 60.1
Sc05g0001580 Simmondsia chinensis HOM05D007415 ORTHO05D009324 1.4e-81 307.0 259 61.4
CAN.G15.19 Capsicum annuum HOM05D007415 ORTHO05D009324 2.4e-81 306.2 260 60.0
TAR636G2599 Trochodendron aralioides HOM05D007415 ORTHO05D009324 2.4e-81 306.2 256 59.8
HanXRQChr08g0230811 Helianthus annuus HOM05D007415 ORTHO05D009324 4.0e-81 305.4 258 56.2
CANSAT11G1932 Cannabis sativa HOM05D007415 ORTHO05D009324 1.7e-79 300.1 251 57.8
Sed0017664 Sechium edule HOM05D007415 ORTHO05D009324 1.7e-79 300.1 256 59.0
PSO675G4429 Papaver somniferum HOM05D007415 ORTHO05D009324 2.7e-77 292.7 269 55.8
ClCG01G014510 Citrullus lanatus HOM05D007415 ORTHO05D009324 1.0e-76 290.8 270 56.7
Nitab4.5_0010771g0010 Nicotiana tabacum HOM05D007415 ORTHO05D009324 7.4e-75 284.6 260 57.3
QL03p044140 Quercus lobata HOM05D007415 ORTHO05D009324 4.8e-74 282.0 374 43.6
Cpa.g.sc8.12 Carica papaya HOM05D007415 ORTHO05D009324 3.1e-73 279.3 194 68.0
arahy.Tifrunner.gnm1.ann1.HL0ERI Arachis hypogaea HOM05D007415 ORTHO05D009324 3.8e-71 272.3 252 56.3
Nn4g24568 Nelumbo nucifera HOM05D007415 ORTHO05D009324 3.8e-71 272.3 258 54.3
TWI36G0361 Tripterygium wilfordii HOM05D007415 ORTHO05D009324 3.8e-71 272.3 257 55.6
Lj1g0001063 Lotus japonicus HOM05D007415 ORTHO05D009324 6.5e-71 271.6 268 52.6
arahy.Tifrunner.gnm1.ann1.YL0UD8 Arachis hypogaea HOM05D007415 ORTHO05D009324 1.1e-70 270.8 253 56.1
SalBow6G5534 Salvia bowleyana HOM05D007415 ORTHO05D009324 2.5e-70 269.6 322 46.0
Gohir.A07G194700 Gossypium hirsutum HOM05D007415 ORTHO05D009324 4.2e-70 268.9 211 62.6
Peaxi162Scf00424g00066 Petunia axillaris HOM05D007415 ORTHO05D009324 1.1e-67 260.8 229 58.5
THA.LOC104808823 Tarenaya hassleriana HOM05D007415 ORTHO05D009324 2.5e-67 259.6 271 53.1
unitig_61.g26009 Utricularia gibba HOM05D007415 ORTHO05D009324 5.7e-67 258.5 257 53.7
Aa31sc565G30 Aethionema arabicum HOM05D007415 ORTHO05D009324 9.7e-67 257.7 255 51.8
ECA247G1801 Erigeron canadensis HOM05D007415 ORTHO05D009324 2.8e-66 256.1 249 53.0
AL9U11890 Arabidopsis lyrata HOM05D007415 ORTHO05D009324 3.7e-66 255.8 253 52.6
Psat5g001880 Pisum sativum HOM05D007415 ORTHO05D009324 6.3e-66 255.0 251 52.6
Carub.0007s3006 Capsella rubella HOM05D007415 ORTHO05D009324 8.2e-66 254.6 253 52.6
Sp7g09150 Schrenkiella parvula HOM05D007415 ORTHO05D009324 1.1e-65 254.2 256 53.5
CARHR218100 Cardamine hirsuta HOM05D007415 ORTHO05D009324 1.4e-65 253.8 253 52.6
DCAR_012712 Daucus carota HOM05D006570 ORTHO05D008193 2.4e-65 253.1 261 51.7
Duzib133G1418 Durio zibethinus HOM05D007415 ORTHO05D009324 2.4e-65 253.1 257 52.9
Thhalv10026014m.g Eutrema salsugineum HOM05D007415 ORTHO05D009324 2.4e-65 253.1 252 52.0
Glyma.04G002800 Glycine max HOM05D007415 ORTHO05D009324 4.1e-65 252.3 251 51.8
SHI10204 Sapria himalayana HOM05D007415 ORTHO05D009324 5.3e-65 251.9 266 49.2
VMungo1309G2266 Vigna mungo HOM05D007415 ORTHO05D009324 3.4e-64 249.2 251 53.0
Lj1C108T7 Lonicera japonica HOM05D007415 ORTHO05D009324 7.7e-64 248.1 177 67.2
AT4G12760 Arabidopsis thaliana HOM05D007415 ORTHO05D009324 1.3e-63 247.3 253 51.0
Medtr3g118090 Medicago truncatula HOM05D007415 ORTHO05D009324 4.2e-62 242.3 258 49.2
BcaB04g17744 Brassica carinata HOM05D007415 ORTHO05D009324 7.2e-62 241.5 253 49.4
Sabra14G0132700 Salix brachista HOM05D007415 ORTHO05D009324 4.6e-61 238.8 331 45.9
Hund02818 Selenicereus undatus HOM05D007415 ORTHO05D009324 6.1e-61 238.4 201 62.7
BcaC07g37433 Brassica carinata HOM05D007415 ORTHO05D009324 2.3e-60 236.5 252 49.2
C08p09070 Brassica napus HOM05D007415 ORTHO05D009324 2.3e-60 236.5 252 49.2
BolC8t47754H Brassica oleracea HOM05D007415 ORTHO05D009324 2.3e-60 236.5 252 49.2
Aqoxy4G00006 Aquilegia oxysepala HOM05D007415 ORTHO05D009324 3.9e-60 235.7 254 47.6
EL10Ac5g10567 Beta vulgaris HOM05D007415 ORTHO05D009324 1.1e-59 234.2 202 62.4
GSVIVG01038257001 Vitis vinifera HOM05D007415 ORTHO05D009324 5.7e-59 231.9 235 48.1
BraA08t32753Z Brassica rapa HOM05D007415 ORTHO05D009324 9.7e-59 231.1 253 48.6
MBI10_g35389_MAGBIO Magnolia biondii HOM05D007415 ORTHO05D009324 8.2e-58 228.0 242 50.8
A08p07370 Brassica napus HOM05D007415 ORTHO05D009324 2.6e-56 223.0 278 45.7
CDE04G2941 Ceratophyllum demersum HOM05D007415 ORTHO05D009324 3.4e-56 222.6 239 50.6
Lalb_Chr11g0061191 Lupinus albus HOM05D007415 ORTHO05D009324 5.0e-55 218.8 178 58.4
PSO732G0601 Papaver somniferum HOM05D007415 ORTHO05D009324 3.2e-54 216.1 272 46.7
AUR62008047 Chenopodium quinoa HOM05D007415 ORTHO05D009324 1.0e-52 211.1 262 47.7
Duzib138G0016 Durio zibethinus HOM05D007415 ORTHO05D009324 2.6e-51 206.5 250 47.2
AUR62028622 Chenopodium quinoa HOM05D007415 ORTHO05D009324 4.4e-51 205.7 262 46.6
Os05g0417300 Oryza sativa ssp. japonica HOM05D007415 ORTHO05D009324 4.4e-51 205.7 246 43.5
PGSC0003DMG400020290 Solanum tuberosum HOM05D007415 ORTHO05D009324 1.6e-48 197.2 141 66.7
Phvul.009G118400 Phaseolus vulgaris HOM05D007415 ORTHO05D009324 1.1e-46 191.0 256 45.3
Glyma.06G002800 Glycine max HOM05D007415 ORTHO05D009324 3.6e-45 186.0 204 48.5
ATR0743G053 Amborella trichopoda HOM05D007415 ORTHO05D009324 1.2e-43 181.0 236 41.9
Haze_04514 Corylus avellana HOM05D007415 ORTHO05D009324 7.2e-38 161.8 146 56.8
Ca_15292_v3 Cicer arietinum L. HOM05D007415 ORTHO05D009324 2.0e-32 143.7 160 50.0
TPR.G38565 Trifolium pratense HOM05D007415 ORTHO05D009324 2.1e-29 133.7 251 35.9
Ah.11g050670 Amaranthus hybridus HOM05D007415 ORTHO05D009324 1.2e-27 127.9 222 40.5
HPP92_001921 Vanilla planifolia HOM05D007415 ORTHO05D009324 4.4e-27 125.9 159 44.7
Mapoly0134s0003 Marchantia polymorpha HOM05D007415 ORTHO05D009324 1.6e-24 117.5 244 34.8
Pp3c1_28310 Physcomitrium patens HOM05D007415 ORTHO05D009324 1.9e-22 110.5 215 32.1
DCAR_017283 Daucus carota HOM05D007415 ORTHO05D009324 6.8e-20 102.1 135 43.0
SalBow2G2324 Salvia bowleyana HOM05D007415 ORTHO05D009324 8.9e-20 101.7 270 31.1
AagrBONN_evm.TU.Sc2ySwM_362.2902 Anthoceros agrestis HOM05D007415 ORTHO05D009324 4.4e-19 99.4 168 38.1
PGSC0003DMG400007530 Solanum tuberosum HOM05D007415 ORTHO05D009324 1.6e-16 90.9 83 51.8
SMO356G0522 Selaginella moellendorffii HOM05D007415 ORTHO05D009324 7.8e-16 88.6 246 28.5
Zm00001eb288240 Zea mays HOM05D007415 ORTHO05D009324 6.2e-13 79.0 116 37.9


User provided reference genes

Program Settings