Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0037944 Camellia sinensis var. sinensis HOM05D006672 ORTHO05D007769 2.4e-60 235.3 123 100.0
CSS0000508 Camellia sinensis var. sinensis HOM05D006672 ORTHO05D007769 1.8e-42 176.0 121 80.2
Actinidia24746 Actinidia chinensis HOM05D006672 ORTHO05D007769 4.6e-19 98.2 137 50.4
Dinv30493 Davidia involucrata HOM05D006672 ORTHO05D007769 5.7e-17 91.3 161 46.0
Hma1.2p1_2022F.1_g311340 Hydrangea macrophylla HOM05D006672 ORTHO05D007769 1.3e-13 80.1 137 43.1
Rhsim12G0199700 Rhododendron simsii HOM05D006672 ORTHO05D007769 5.0e-13 78.2 158 43.7
Gohir.D05G130600 Gossypium hirsutum HOM05D006672 ORTHO05D007769 1.4e-12 76.6 127 44.1
Gorai.009G134300 Gossypium raimondii HOM05D006672 ORTHO05D007769 1.4e-12 76.6 127 44.1
Actinidia08988 Actinidia chinensis HOM05D000726 ORTHO05D007769 1.9e-12 76.3 134 44.0
Ciclev10026595m.g Citrus clementina HOM05D006672 ORTHO05D007769 2.5e-12 75.9 102 49.0
Glyma.08G205200 Glycine max HOM05D006672 ORTHO05D007769 5.5e-12 74.7 135 41.5
Potri.003G053500 Populus trichocarpa HOM05D006672 ORTHO05D007769 5.5e-12 74.7 160 40.0
ECA234G2073 Erigeron canadensis HOM05D006672 ORTHO05D007769 7.2e-12 74.3 152 40.1
DCAR_022631 Daucus carota HOM05D006672 ORTHO05D007769 9.4e-12 73.9 150 38.0
Cc04_g03140 Coffea canephora HOM05D006672 ORTHO05D007769 1.2e-11 73.6 124 43.5
DCAR_026329 Daucus carota HOM05D006672 ORTHO05D007769 1.2e-11 73.6 149 38.9
TWI75G0771 Tripterygium wilfordii HOM05D006672 ORTHO05D007769 1.2e-11 73.6 163 38.7
MBI04_g22016_MAGBIO Magnolia biondii HOM05D006672 ORTHO05D007769 2.1e-11 72.8 162 40.7
SalBow1G8254 Salvia bowleyana HOM05D000380 ORTHO05D000561 2.7e-11 72.4 157 38.2
FAN05G5736 Fragaria x ananassa HOM05D006672 ORTHO05D007769 3.6e-11 72.0 153 41.8
TWI12G1441 Tripterygium wilfordii HOM05D006672 ORTHO05D007769 4.7e-11 71.6 168 35.7
Manes.04G128475 Manihot esculenta HOM05D006672 ORTHO05D007769 6.1e-11 71.2 169 39.1
AUR62011637 Chenopodium quinoa HOM05D006672 ORTHO05D007769 7.9e-11 70.9 119 43.7
Oeu040367.1 Olea europaea HOM05D006672 ORTHO05D007769 7.9e-11 70.9 100 52.0
arahy.Tifrunner.gnm1.ann1.HW7XL7 Arachis hypogaea HOM05D006672 ORTHO05D007769 1.0e-10 70.5 131 42.7
HanXRQChr10g0313401 Helianthus annuus HOM05D006672 ORTHO05D007769 1.0e-10 70.5 97 49.5
Nitab4.5_0001315g0240 Nicotiana tabacum HOM05D006672 ORTHO05D007769 1.4e-10 70.1 127 44.1
MSTRG.22671 Avicennia marina HOM05D006672 ORTHO05D007769 1.8e-10 69.7 147 41.5
arahy.Tifrunner.gnm1.ann1.C7681Z Arachis hypogaea HOM05D006672 ORTHO05D007769 2.3e-10 69.3 133 42.1
Migut.D01021 Erythranthe guttata HOM05D006672 ORTHO05D007769 2.3e-10 69.3 119 45.4
Atru.chr1.3318 Acer truncatum HOM05D006672 ORTHO05D007769 3.0e-10 68.9 133 40.6
COL.COLO4_30405 Corchorus olitorius HOM05D006672 ORTHO05D007769 3.0e-10 68.9 164 40.2
CiPaw.02G149600 Carya illinoinensis HOM05D006672 ORTHO05D007769 3.9e-10 68.6 59 62.7
FAN14G5379 Fragaria x ananassa HOM05D006672 ORTHO05D007769 3.9e-10 68.6 142 41.5
Ah.01g021520 Amaranthus hybridus HOM05D006672 ORTHO05D007769 5.1e-10 68.2 157 40.1
AUR62016468 Chenopodium quinoa HOM05D006672 ORTHO05D007769 5.1e-10 68.2 119 42.9
FvH4_6g31600 Fragaria vesca HOM05D006672 ORTHO05D007769 5.1e-10 68.2 151 39.7
QL05p022164 Quercus lobata HOM05D006672 ORTHO05D007769 5.1e-10 68.2 59 61.0
vmacro16964 Vaccinium macrocarpon HOM05D006672 ORTHO05D007769 5.1e-10 68.2 174 37.9
Gohir.A05G131200 Gossypium hirsutum HOM05D006672 ORTHO05D007769 6.7e-10 67.8 127 40.9
SGA_v2.0_scaffold4G02004 Striga asiatica HOM05D006672 ORTHO05D007769 6.7e-10 67.8 162 38.9
Ca_20375_v3 Cicer arietinum L. HOM05D006672 ORTHO05D007769 8.8e-10 67.4 125 44.0
FAN09G1670 Fragaria x ananassa HOM05D006672 ORTHO05D007769 1.1e-09 67.0 151 37.7
TPR.G17666 Trifolium pratense HOM05D006672 ORTHO05D007769 1.5e-09 66.6 121 43.8
ClCG07G013120 Citrullus lanatus HOM05D006672 ORTHO05D007769 2.0e-09 66.2 132 42.4
Lsat_1_v5_gn_5_130661 Lactuca sativa HOM05D006672 ORTHO05D007769 2.0e-09 66.2 129 41.1
VMungo0331G0342 Vigna mungo HOM05D006672 ORTHO05D007769 2.0e-09 66.2 107 44.9
arahy.Tifrunner.gnm1.ann1.ZTP7X5 Arachis hypogaea HOM05D006672 ORTHO05D007769 3.3e-09 65.5 118 42.4
RcHm_v2.0_Chr2g0138661 Rosa chinensis HOM05D006672 ORTHO05D007769 3.3e-09 65.5 145 39.3
TAR636G2852 Trochodendron aralioides HOM05D006672 ORTHO05D007769 3.3e-09 65.5 124 40.3
Sabra03G0029900 Salix brachista HOM05D006672 ORTHO05D007769 4.4e-09 65.1 150 40.7
CsaV3_3G025030 Cucumis sativus L. HOM05D006672 ORTHO05D007769 5.7e-09 64.7 122 44.3
Sp1g13550 Schrenkiella parvula HOM05D006672 ORTHO05D007769 5.7e-09 64.7 161 37.3
arahy.Tifrunner.gnm1.ann1.N61AC9 Arachis hypogaea HOM05D006672 ORTHO05D007769 7.4e-09 64.3 126 41.3
Lsat_1_v5_gn_5_130760 Lactuca sativa HOM05D006672 ORTHO05D007769 7.4e-09 64.3 114 43.9
Lj3g0012066 Lotus japonicus HOM05D006672 ORTHO05D007769 7.4e-09 64.3 121 42.1
Peaxi162Scf00015g00013 Petunia axillaris HOM05D006672 ORTHO05D007769 7.4e-09 64.3 89 50.6
AL1G27320 Arabidopsis lyrata HOM05D006672 ORTHO05D007769 9.7e-09 63.9 150 38.7
Phvul.010G149100 Phaseolus vulgaris HOM05D006672 ORTHO05D007769 9.7e-09 63.9 163 39.3
Prupe.3G068600 Prunus persica HOM05D006672 ORTHO05D007769 9.7e-09 63.9 59 59.3
Nitab4.5_0008314g0010 Nicotiana tabacum HOM05D006672 ORTHO05D007769 1.3e-08 63.5 126 40.5
arahy.Tifrunner.gnm1.ann1.QF27IC Arachis hypogaea HOM05D006672 ORTHO05D007769 1.7e-08 63.2 133 39.8
Cfa009362 Carpinus fangiana HOM05D006672 ORTHO05D007769 1.7e-08 63.2 128 39.1
Psat7g250280 Pisum sativum HOM05D006672 ORTHO05D007769 1.7e-08 63.2 113 44.2
AT1G15230 Arabidopsis thaliana HOM05D006672 ORTHO05D007769 2.2e-08 62.8 149 39.6
arahy.Tifrunner.gnm1.ann1.HQ5KA8 Arachis hypogaea HOM05D006672 ORTHO05D007769 2.2e-08 62.8 98 42.9
EL10Ac9g22019 Beta vulgaris HOM05D000202 ORTHO05D000117 2.2e-08 62.8 149 37.6
Medtr4g012950 Medicago truncatula HOM05D006672 ORTHO05D007769 2.2e-08 62.8 122 41.0
CANSAT56G0062 Cannabis sativa HOM05D006672 ORTHO05D007769 2.8e-08 62.4 148 35.8
Medtr0206s0010 Medicago truncatula HOM05D006672 ORTHO05D007769 2.8e-08 62.4 122 41.8
Haze_12408 Corylus avellana HOM05D006672 ORTHO05D007769 3.7e-08 62.0 164 39.0
MELO3C012968.2 Cucumis melo HOM05D006672 ORTHO05D007769 3.7e-08 62.0 132 41.7
Carub.0001s1499 Capsella rubella HOM05D006672 ORTHO05D007769 4.8e-08 61.6 141 39.0
Duzib235G0275 Durio zibethinus HOM05D006672 ORTHO05D007769 8.2e-08 60.8 50 64.0
BraA06t24303Z Brassica rapa HOM05D006672 ORTHO05D007769 1.8e-07 59.7 149 38.3
CARHR015760 Cardamine hirsuta HOM05D006672 ORTHO05D007769 1.8e-07 59.7 144 38.9
BolC5t30073H Brassica oleracea HOM05D006672 ORTHO05D007769 3.1e-07 58.9 88 50.0
Thhalv10008936m.g Eutrema salsugineum HOM05D006672 ORTHO05D007769 3.1e-07 58.9 88 47.7
Lsat_1_v5_gn_2_34400 Lactuca sativa HOM05D008424 ORTHO05D007769 4.1e-07 58.5 154 37.0
BcaC05g25452 Brassica carinata HOM05D006672 ORTHO05D007769 5.3e-07 58.2 88 50.0
C05p13360 Brassica napus HOM05D006672 ORTHO05D007769 5.3e-07 58.2 88 50.0
Duzib160G0370 Durio zibethinus HOM05D000726 ORTHO05D007769 5.3e-07 58.2 157 36.9
arahy.Tifrunner.gnm1.ann1.K72DJ3 Arachis hypogaea HOM05D006672 ORTHO05D007769 9.1e-07 57.4 59 57.6
BcaB03g13070 Brassica carinata HOM05D005761 ORTHO05D007286 1.5e-06 56.6 123 40.7
Solyc03g120740.1 Solanum lycopersicum HOM05D006672 ORTHO05D007769 2.0e-06 56.2 134 38.1
A06p11230 Brassica napus HOM05D006672 ORTHO05D007769 2.6e-06 55.8 144 37.5
PGSC0003DMG400040414 Solanum tuberosum HOM05D006672 ORTHO05D007769 2.6e-06 55.8 116 39.7
arahy.Tifrunner.gnm1.ann1.MVJ1PZ Arachis hypogaea HOM05D006672 ORTHO05D007769 3.4e-06 55.5 132 38.6
BcaC05g25462 Brassica carinata HOM05D006672 ORTHO05D007769 3.4e-06 55.5 125 42.4
Aa31LG7G40 Aethionema arabicum HOM05D006672 ORTHO05D007769 4.5e-06 55.1 123 43.1
Sed0005168 Sechium edule HOM05D006672 ORTHO05D007769 4.5e-06 55.1 123 41.5
THA.LOC104800426 Tarenaya hassleriana HOM05D006672 ORTHO05D007769 4.5e-06 55.1 138 36.2
arahy.Tifrunner.gnm1.ann1.07RGV5 Arachis hypogaea HOM05D006672 ORTHO05D007769 5.9e-06 54.7 163 36.2
Thecc.06G091100 Theobroma cacao HOM05D006672 ORTHO05D007769 5.9e-06 54.7 168 35.1
Lalb_Chr25g0279941 Lupinus albus HOM05D006672 ORTHO05D007769 7.7e-06 54.3 112 41.1
Sopen03g039560 Solanum pennellii HOM05D006672 ORTHO05D007769 7.7e-06 54.3 136 37.5


User provided reference genes

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