Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0021046 Camellia sinensis var. sinensis HOM05D002474 ORTHO05D006727 1.8e-201 705.7 354 100.0
CSS0037906 Camellia sinensis var. sinensis HOM05D002474 ORTHO05D006727 1.8e-201 705.7 354 100.0
Dinv33713 Davidia involucrata HOM05D002474 ORTHO05D006727 5.9e-168 594.3 352 82.7
Nn4g23008 Nelumbo nucifera HOM05D002474 ORTHO05D006727 2.9e-162 575.5 352 79.5
GSVIVG01032597001 Vitis vinifera HOM05D002474 ORTHO05D006727 1.4e-161 573.2 351 80.3
QL02p080225 Quercus lobata HOM05D002474 ORTHO05D006727 5.9e-160 567.8 351 78.9
Hma1.2p1_0449F.1_g154950 Hydrangea macrophylla HOM05D002474 ORTHO05D006727 3.9e-159 565.1 350 78.9
PSO478G4089 Papaver somniferum HOM05D002474 ORTHO05D006727 1.9e-158 562.8 353 77.6
Atru.chr8.2476 Acer truncatum HOM05D002474 ORTHO05D006727 5.6e-158 561.2 349 78.5
CiPaw.04G020500 Carya illinoinensis HOM05D002474 ORTHO05D006727 1.2e-155 553.5 351 78.1
Eucgr.J02138 Eucalyptus grandis HOM05D002474 ORTHO05D006727 2.2e-154 549.3 345 77.1
ECA246G0556 Erigeron canadensis HOM05D002474 ORTHO05D006727 3.7e-154 548.5 346 75.7
RhsimUnG0054500 Rhododendron simsii HOM05D002474 ORTHO05D006727 1.9e-153 546.2 369 76.4
Aqoxy3G00804 Aquilegia oxysepala HOM05D002474 ORTHO05D006727 2.4e-153 545.8 344 75.6
PSO161G0033 Papaver somniferum HOM05D002474 ORTHO05D006727 3.2e-153 545.4 353 75.6
Thecc.09G254500 Theobroma cacao HOM05D002474 ORTHO05D006727 5.4e-153 544.7 347 76.4
Duzib168G1861 Durio zibethinus HOM05D002474 ORTHO05D006727 7.0e-153 544.3 347 78.1
Migut.K01338 Erythranthe guttata HOM05D002474 ORTHO05D006727 7.0e-153 544.3 351 74.4
Solyc02g067480.3 Solanum lycopersicum HOM05D002474 ORTHO05D006727 2.7e-152 542.3 347 75.5
HanXRQChr17g0547501 Helianthus annuus HOM05D002474 ORTHO05D006727 6.0e-152 541.2 350 75.1
PGR083G0251 Punica granatum HOM05D002474 ORTHO05D006727 6.0e-152 541.2 342 76.6
Gohir.A13G220300 Gossypium hirsutum HOM05D002474 ORTHO05D006727 7.8e-152 540.8 342 77.2
Gorai.013G255100 Gossypium raimondii HOM05D002474 ORTHO05D006727 1.0e-151 540.4 342 77.5
CAN.G1128.5 Capsicum annuum HOM05D002474 ORTHO05D006727 3.9e-151 538.5 348 75.3
Sopen02g016630 Solanum pennellii HOM05D002474 ORTHO05D006727 3.9e-151 538.5 347 74.6
Ciclev10011620m.g Citrus clementina HOM05D002474 ORTHO05D006727 1.9e-150 536.2 348 77.3
CsaV3_5G037800 Cucumis sativus L. HOM05D002474 ORTHO05D006727 1.9e-150 536.2 351 73.8
FvH4_6g49390 Fragaria vesca HOM05D002474 ORTHO05D006727 9.5e-150 533.9 348 75.0
RcHm_v2.0_Chr2g0169251 Rosa chinensis HOM05D002474 ORTHO05D006727 9.5e-150 533.9 348 75.3
MELO3C021965.2 Cucumis melo HOM05D002474 ORTHO05D006727 2.1e-149 532.7 342 75.1
Oeu033341.3 Olea europaea HOM05D002474 ORTHO05D006727 3.6e-149 531.9 382 70.7
PGSC0003DMG400006940 Solanum tuberosum HOM05D002474 ORTHO05D006727 4.7e-149 531.6 342 75.1
Potri.004G130000 Populus trichocarpa HOM05D002474 ORTHO05D006727 8.9e-148 527.3 352 73.3
Nitab4.5_0006062g0010 Nicotiana tabacum HOM05D002474 ORTHO05D006727 1.5e-147 526.6 342 75.1
Lsat_1_v5_gn_3_102300 Lactuca sativa HOM05D002474 ORTHO05D006727 5.8e-147 524.6 345 74.2
Nitab4.5_0002699g0040 Nicotiana tabacum HOM05D002474 ORTHO05D006727 5.8e-147 524.6 334 76.0
Rhsim10G0032000 Rhododendron simsii HOM05D002474 ORTHO05D006727 7.5e-147 524.2 349 77.1
TAR629G1594 Trochodendron aralioides HOM05D002474 ORTHO05D006727 4.1e-145 518.5 313 81.2
Lalb_Chr06g0175531 Lupinus albus HOM05D002474 ORTHO05D006727 2.7e-144 515.8 343 70.8
Phvul.004G025500 Phaseolus vulgaris HOM05D002474 ORTHO05D006727 4.6e-144 515.0 347 70.9
Gohir.D13G224300 Gossypium hirsutum HOM05D002474 ORTHO05D006727 8.6e-143 510.8 351 73.5
Psat1g077640 Pisum sativum HOM05D002474 ORTHO05D006727 1.9e-142 509.6 345 70.1
arahy.Tifrunner.gnm1.ann1.B2F8E8 Arachis hypogaea HOM05D002474 ORTHO05D006727 5.6e-142 508.1 361 69.0
Sc11g0006920 Simmondsia chinensis HOM05D002474 ORTHO05D006727 7.3e-142 507.7 342 72.8
COL.COLO4_24935 Corchorus olitorius HOM05D002474 ORTHO05D006727 2.8e-141 505.8 347 72.9
Ca_04259_v3 Cicer arietinum L. HOM05D002474 ORTHO05D006727 3.6e-141 505.4 344 69.2
ATR0609G116 Amborella trichopoda HOM05D002474 ORTHO05D006727 4.0e-140 501.9 351 68.9
Os12g0638800 Oryza sativa ssp. japonica HOM05D002474 ORTHO05D006727 2.0e-139 499.6 341 70.4
Lj2g0026556 Lotus japonicus HOM05D002474 ORTHO05D006727 2.6e-139 499.2 344 68.6
Medtr6g011270 Medicago truncatula HOM05D002474 ORTHO05D006727 3.4e-139 498.8 345 68.4
THA.LOC104805441 Tarenaya hassleriana HOM05D002474 ORTHO05D006727 1.7e-138 496.5 346 69.1
unitig_748.g8621 Utricularia gibba HOM05D002474 ORTHO05D006727 1.7e-138 496.5 346 67.9
TPR.G4252 Trifolium pratense HOM05D002474 ORTHO05D006727 3.8e-138 495.4 343 69.1
Cfa007503 Carpinus fangiana HOM05D002474 ORTHO05D006727 4.9e-138 495.0 383 66.8
Nitab4.5_0023901g0010 Nicotiana tabacum HOM05D002474 ORTHO05D006727 1.4e-137 493.4 325 74.2
HanXRQChr16g0519921 Helianthus annuus HOM05D002474 ORTHO05D006727 3.5e-136 488.8 324 74.4
Zm00001eb033100 Zea mays HOM05D002474 ORTHO05D006727 5.1e-135 485.0 381 62.2
Carub.0007s3579 Capsella rubella HOM05D002474 ORTHO05D006727 1.5e-134 483.4 345 68.4
BraA04t16928Z Brassica rapa HOM05D002474 ORTHO05D006727 1.9e-134 483.0 341 69.5
SGA_v2.0_scaffold224G42953 Striga asiatica HOM05D002474 ORTHO05D006727 1.9e-134 483.0 361 67.0
CDE08G1502 Ceratophyllum demersum HOM05D002474 ORTHO05D006727 9.6e-134 480.7 342 68.1
Haze_14590 Corylus avellana HOM05D002474 ORTHO05D006727 1.4e-132 476.9 356 68.8
Peaxi162Scf00059g00319 Petunia axillaris HOM05D002474 ORTHO05D006727 3.1e-132 475.7 324 72.5
CARHR262240 Cardamine hirsuta HOM05D002474 ORTHO05D006727 4.0e-132 475.3 341 68.3
AL7G50200 Arabidopsis lyrata HOM05D002474 ORTHO05D006727 4.4e-131 471.9 341 68.0
FAN02G0112 Fragaria x ananassa HOM05D002474 ORTHO05D006727 7.6e-131 471.1 348 68.7
Hund13252 Selenicereus undatus HOM05D002474 ORTHO05D006727 9.9e-131 470.7 410 61.7
Sabra04G0087600 Salix brachista HOM05D002474 ORTHO05D006727 1.3e-130 470.3 397 62.2
AT5G39940 Arabidopsis thaliana HOM05D002474 ORTHO05D006727 2.2e-130 469.5 349 66.5
Aa31LG9G1670 Aethionema arabicum HOM05D002474 ORTHO05D006727 1.1e-129 467.2 342 67.8
TWI60G0106 Tripterygium wilfordii HOM05D002474 ORTHO05D006727 3.2e-129 465.7 348 68.7
Cpa.g.sc14.49 Carica papaya HOM05D002474 ORTHO05D006727 7.1e-129 464.5 366 66.1
Ah.12g065360 Amaranthus hybridus HOM05D002474 ORTHO05D006727 7.8e-128 461.1 342 67.0
arahy.Tifrunner.gnm1.ann1.DRNA5E Arachis hypogaea HOM05D002474 ORTHO05D006727 1.7e-127 459.9 361 63.4
EL10Ac2g02929 Beta vulgaris HOM05D002474 ORTHO05D006727 5.1e-127 458.4 342 67.0
Thhalv10028129m.g Eutrema salsugineum HOM05D002474 ORTHO05D006727 6.6e-127 458.0 341 68.0
FAN14G2185 Fragaria x ananassa HOM05D002474 ORTHO05D006727 4.3e-126 455.3 380 63.4
VMungo0464G0136 Vigna mungo HOM05D002474 ORTHO05D006727 4.3e-126 455.3 402 59.2
Glyma.19G019000 Glycine max HOM05D002474 ORTHO05D006727 1.1e-124 450.7 349 63.0
CANSAT64G2711 Cannabis sativa HOM05D002474 ORTHO05D006727 3.8e-122 442.2 347 66.3
DCAR_011168 Daucus carota HOM05D002474 ORTHO05D006727 1.6e-120 436.8 274 77.4
Sed0010242 Sechium edule HOM05D002474 ORTHO05D006727 4.6e-120 435.3 293 71.7
ClCG09G018440 Citrullus lanatus HOM05D002474 ORTHO05D006727 8.7e-119 431.0 483 49.7
FAN05G2709 Fragaria x ananassa HOM05D002474 ORTHO05D006727 1.3e-117 427.2 348 64.1
FAN09G4837 Fragaria x ananassa HOM05D002474 ORTHO05D006727 8.1e-117 424.5 380 60.8
AUR62031654 Chenopodium quinoa HOM05D002474 ORTHO05D006727 4.0e-116 422.2 352 60.8
BcaB06g27397 Brassica carinata HOM05D002474 ORTHO05D006727 1.2e-115 420.6 334 64.4
vmacro05750 Vaccinium macrocarpon HOM05D002474 ORTHO05D006727 2.9e-114 416.0 360 63.9
SalBow1G0883 Salvia bowleyana HOM05D002474 ORTHO05D006727 1.6e-112 410.2 333 62.8
A04p12710 Brassica napus HOM05D002474 ORTHO05D006727 5.1e-111 405.2 300 66.3
C04p46420 Brassica napus HOM05D002474 ORTHO05D006727 5.1e-111 405.2 300 66.7
AagrBONN_evm.TU.Sc2ySwM_369.199 Anthoceros agrestis HOM05D002474 ORTHO05D006727 1.1e-108 397.5 347 54.5
Pp3c23_2270 Physcomitrium patens HOM05D002474 ORTHO05D006727 2.1e-104 383.3 341 55.1
Mapoly0035s0063 Marchantia polymorpha HOM05D002474 ORTHO05D006727 7.9e-104 381.3 339 54.6
Prupe.3G272800 Prunus persica HOM05D002474 ORTHO05D006727 9.7e-94 347.8 244 70.9
AUR62018296 Chenopodium quinoa HOM05D002474 ORTHO05D006727 2.7e-88 329.7 346 52.0
SMO137G0254 Selaginella moellendorffii HOM05D002474 ORTHO05D006727 7.9e-88 328.2 384 44.8
QL02p080121 Quercus lobata HOM05D002474 ORTHO05D006727 1.3e-85 320.9 194 79.9
Hma1.2p1_0449F.1_g154940 Hydrangea macrophylla HOM05D002474 ORTHO05D006727 4.8e-85 318.9 242 67.8
HPP92_014139 Vanilla planifolia HOM05D002474 ORTHO05D006727 3.1e-84 316.2 211 69.2
CBR_g50657 Chara braunii HOM05D002474 ORTHO05D006727 2.6e-78 296.6 263 56.7
Cc07_g02930 Coffea canephora HOM05D002474 ORTHO05D006727 2.8e-77 293.1 184 76.1
Lj7A402G46 Lonicera japonica HOM05D002474 ORTHO05D006727 1.6e-75 287.3 300 57.0
Manes.S095220 Manihot esculenta HOM05D002474 ORTHO05D006727 6.3e-69 265.4 176 75.0
Cc07_g02920 Coffea canephora HOM05D002474 ORTHO05D006727 9.8e-62 241.5 155 76.1
QL02p080117 Quercus lobata HOM05D002474 ORTHO05D006727 2.0e-54 217.2 137 76.6
Rhsim10G0031600 Rhododendron simsii HOM05D002474 ORTHO05D006727 9.8e-54 214.9 159 70.4
Lsat_1_v5_gn_6_77521 Lactuca sativa HOM05D002474 ORTHO05D006727 2.7e-51 206.8 260 45.4
HanXRQChr09g0265421 Helianthus annuus HOM05D002474 ORTHO05D006727 1.4e-44 184.5 121 71.9
SEGI_13584 Sequoiadendron giganteum HOM05D002474 ORTHO05D006727 6.2e-40 169.1 146 57.5
Lsat_1_v5_gn_2_107941 Lactuca sativa HOM05D002474 ORTHO05D005260 4.7e-32 142.9 236 38.1
Hund13251 Selenicereus undatus HOM05D002474 ORTHO05D006727 4.9e-29 132.9 98 69.4
C09p60950 Brassica napus HOM05D002474 ORTHO05D006727 1.3e-26 124.8 111 56.8
Actinidia35021 Actinidia chinensis HOM05D002474 ORTHO05D006727 2.0e-22 110.9 178 43.8
BolC4t26228H Brassica oleracea HOM05D002474 ORTHO05D006727 2.0e-22 110.9 87 65.5
BolC9t56457H Brassica oleracea HOM05D002474 ORTHO05D006727 2.0e-22 110.9 103 55.3
MCO07G529 Micromonas commoda HOM05D002474 ORTHO05D006727 1.2e-19 101.7 360 27.8
C09p36190 Brassica napus HOM05D002474 ORTHO05D006727 6.0e-19 99.4 96 54.2
MBI04_g20673_MAGBIO Magnolia biondii HOM05D002474 ORTHO05D006727 9.6e-17 92.0 77 58.4
FAN10G3970 Fragaria x ananassa HOM05D002474 ORTHO05D006727 1.2e-16 91.7 52 82.7
MBI04_g20672_MAGBIO Magnolia biondii HOM05D002474 ORTHO05D006727 9.0e-15 85.5 102 48.0
BcaC04g18910 Brassica carinata HOM05D002474 ORTHO05D006727 3.4e-14 83.6 128 41.4
FAN10G3068 Fragaria x ananassa HOM05D002474 ORTHO05D006727 5.8e-14 82.8 47 80.9
Peaxi162Scf00036g01918 Petunia axillaris HOM05D002474 ORTHO05D006727 7.6e-14 82.4 66 56.1
Cre09.g389400 Chlamydomonas reinhardtii HOM05D002474 ORTHO05D006727 8.4e-13 79.0 269 26.0
SEGI_37465 Sequoiadendron giganteum HOM05D002474 ORTHO05D006727 1.4e-12 78.2 51 64.7
Peaxi162Scf00781g00210 Petunia axillaris HOM05D002474 ORTHO05D006727 2.4e-12 77.4 57 57.9
vmacro05749 Vaccinium macrocarpon HOM05D002474 ORTHO05D006727 4.6e-11 73.2 40 85.0
PRCOL_00006911 Prasinoderma coloniale HOM05D002474 ORTHO05D006727 1.3e-10 71.6 406 22.7
CBR_g59258 Chara braunii HOM05D002474 ORTHO05D006727 1.7e-10 71.2 43 69.8
vmacro03926 Vaccinium macrocarpon HOM05D002474 ORTHO05D006727 6.6e-10 69.3 40 80.0
Glyma.13G065601 Glycine max HOM05D002474 ORTHO05D006727 4.3e-09 66.6 79 49.4
Rhsim10G0031800 Rhododendron simsii HOM05D002474 ORTHO05D006727 1.5e-06 58.2 27 88.9


User provided reference genes

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