Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0037884 Camellia sinensis var. sinensis HOM05D065712 ORTHO05D110178 5.1e-44 181.0 116 100.0
CSS0000138 Camellia sinensis var. sinensis HOM05D065712 ORTHO05D112211 1.3e-42 176.4 116 76.7
Hma1.2p1_2149F.1_g315170 Hydrangea macrophylla HOM05D001490 ORTHO05D001450 2.3e-12 75.9 121 43.0
Rhsim12G0144000 Rhododendron simsii HOM05D003846 ORTHO05D004726 1.4e-09 66.6 114 43.9
Actinidia18938 Actinidia chinensis HOM05D001490 ORTHO05D001450 7.0e-09 64.3 97 41.2
AUR62024317 Chenopodium quinoa HOM05D001490 ORTHO05D001450 1.5e-06 56.6 84 38.1
GSVIVG01008257001 Vitis vinifera HOM05D001490 ORTHO05D001450 1.5e-06 56.6 84 40.5
Duzib084G0037 Durio zibethinus HOM05D001490 ORTHO05D001450 1.9e-06 56.2 58 51.7
Duzib084G0311 Durio zibethinus HOM05D001490 ORTHO05D001450 1.9e-06 56.2 58 51.7
TAR374G1258 Trochodendron aralioides HOM05D001490 ORTHO05D001450 1.9e-06 56.2 36 66.7
Gohir.A12G265900 Gossypium hirsutum HOM05D001490 ORTHO05D001450 2.5e-06 55.8 56 50.0
Gohir.D12G266100 Gossypium hirsutum HOM05D001490 ORTHO05D001450 2.5e-06 55.8 56 50.0
Gorai.008G285800 Gossypium raimondii HOM05D001490 ORTHO05D001450 2.5e-06 55.8 56 50.0
Ah.10g029220 Amaranthus hybridus HOM05D001490 ORTHO05D001450 3.3e-06 55.5 36 63.9
Ciclev10021677m.g Citrus clementina HOM05D001490 ORTHO05D001450 3.3e-06 55.5 41 63.4
QL10p023806 Quercus lobata HOM05D001490 ORTHO05D001450 3.3e-06 55.5 38 65.8
CANSAT25G0332 Cannabis sativa HOM05D001490 ORTHO05D001450 4.2e-06 55.1 37 64.9
MD14G1223800 Malus domestica HOM05D001490 ORTHO05D001450 4.2e-06 55.1 38 65.8
Prupe.5G218900 Prunus persica HOM05D001490 ORTHO05D001450 4.2e-06 55.1 38 65.8
THA.LOC104798713 Tarenaya hassleriana HOM05D001490 ORTHO05D001450 4.2e-06 55.1 29 75.9
AUR62012051 Chenopodium quinoa HOM05D001490 ORTHO05D001450 5.5e-06 54.7 37 62.2
vmacro16452 Vaccinium macrocarpon HOM05D001490 ORTHO05D001450 5.5e-06 54.7 115 57.4
AUR62009012 Chenopodium quinoa HOM05D001490 ORTHO05D001450 7.2e-06 54.3 60 46.7
AUR62023289 Chenopodium quinoa HOM05D001490 ORTHO05D001450 7.2e-06 54.3 60 46.7
AUR62043982 Chenopodium quinoa HOM05D001490 ORTHO05D001450 7.2e-06 54.3 60 46.7
COL.COLO4_16256 Corchorus olitorius HOM05D001490 ORTHO05D001450 7.2e-06 54.3 33 69.7
MD06G1212500 Malus domestica HOM05D001490 ORTHO05D001450 7.2e-06 54.3 45 64.4
EL10Ac2g04554 Beta vulgaris HOM05D001490 ORTHO05D001450 9.5e-06 53.9 38 63.2


User provided reference genes

Program Settings