Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0037801 Camellia sinensis var. sinensis HOM05D005169 ORTHO05D006436 3.3e-86 321.6 157 100.0
vmacro05837 Vaccinium macrocarpon HOM05D005169 ORTHO05D006436 2.7e-48 195.7 178 61.8
Dinv33480 Davidia involucrata HOM05D005169 ORTHO05D006436 7.4e-46 187.6 182 60.4
Actinidia36094 Actinidia chinensis HOM05D005169 ORTHO05D006436 9.7e-46 187.2 166 65.1
Dinv35078 Davidia involucrata HOM05D005169 ORTHO05D006436 2.6e-43 179.1 185 59.5
Cfa007415 Carpinus fangiana HOM05D005169 ORTHO05D006436 2.1e-40 169.5 184 53.3
Rhsim10G0020400 Rhododendron simsii HOM05D005169 ORTHO05D006256 3.6e-40 168.7 176 55.7
CiPaw.03G039400 Carya illinoinensis HOM05D005169 ORTHO05D006436 3.9e-39 165.2 181 53.6
Haze_14687 Corylus avellana HOM05D005169 ORTHO05D006436 3.9e-39 165.2 179 53.6
Hma1.2p1_0858F.1_g229310 Hydrangea macrophylla HOM05D005169 ORTHO05D006436 4.1e-36 155.2 187 48.7
QL02p075994 Quercus lobata HOM05D005169 ORTHO05D006436 4.1e-36 155.2 195 51.3
TAR629G1679 Trochodendron aralioides HOM05D005169 ORTHO05D006436 3.8e-34 148.7 178 50.6
Cc07_g02080 Coffea canephora HOM05D005169 ORTHO05D006436 1.9e-33 146.4 194 46.4
Lju41C36T6 Lonicera japonica HOM05D005169 ORTHO05D006436 2.5e-33 146.0 182 47.8
TAR622G1423 Trochodendron aralioides HOM05D005169 ORTHO05D006436 9.4e-33 144.1 175 49.7
Potri.001G349700 Populus trichocarpa HOM05D005169 ORTHO05D006436 1.6e-32 143.3 182 48.4
MELO3C021551.2 Cucumis melo HOM05D005169 ORTHO05D006436 3.6e-32 142.1 152 54.6
MD17G1033200 Malus domestica HOM05D005169 ORTHO05D006436 3.6e-32 142.1 171 48.0
Nitab4.5_0002306g0060 Nicotiana tabacum HOM05D005169 ORTHO05D006436 4.7e-32 141.7 181 49.7
ClCG09G019030 Citrullus lanatus HOM05D005169 ORTHO05D006436 1.4e-31 140.2 153 54.2
CsaV3_5G027330 Cucumis sativus L. HOM05D005169 ORTHO05D005030 1.4e-31 140.2 167 49.7
Nitab4.5_0002416g0060 Nicotiana tabacum HOM05D005169 ORTHO05D006436 1.8e-31 139.8 182 47.3
Prupe.3G286300 Prunus persica HOM05D005169 ORTHO05D006436 4.0e-31 138.7 177 48.0
Gorai.006G030600 Gossypium raimondii HOM05D005169 ORTHO05D006436 1.5e-30 136.7 167 50.9
Sabra16G0229100 Salix brachista HOM05D005169 ORTHO05D006436 4.4e-30 135.2 181 43.1
Gohir.D09G026600 Gossypium hirsutum HOM05D005169 ORTHO05D006436 1.3e-29 133.7 167 49.1
COL.COLO4_28998 Corchorus olitorius HOM05D005169 ORTHO05D006436 2.2e-29 132.9 196 43.4
Medtr6g406210 Medicago truncatula HOM05D005169 ORTHO05D006436 2.2e-29 132.9 165 46.1
Peaxi162Scf00700g00522 Petunia axillaris HOM05D005169 ORTHO05D006436 2.2e-29 132.9 161 48.4
Psat1g056600 Pisum sativum HOM05D005169 ORTHO05D006436 4.8e-29 131.7 149 47.7
Gohir.D11G070900 Gossypium hirsutum HOM05D005169 ORTHO05D006436 6.3e-29 131.3 162 48.1
Gorai.007G076200 Gossypium raimondii HOM05D005169 ORTHO05D006436 6.3e-29 131.3 162 48.1
Gohir.A09G026900 Gossypium hirsutum HOM05D005169 ORTHO05D006436 8.2e-29 131.0 168 49.4
C09p62450 Brassica napus HOM05D005169 ORTHO05D006436 1.1e-28 130.6 186 43.5
BraA10t44462Z Brassica rapa HOM05D005169 ORTHO05D006436 1.4e-28 130.2 204 41.2
Gohir.A11G067000 Gossypium hirsutum HOM05D005169 ORTHO05D006436 1.4e-28 130.2 163 46.6
Oeu014861.1 Olea europaea HOM05D005169 ORTHO05D006436 1.4e-28 130.2 140 50.7
HanXRQChr09g0266101 Helianthus annuus HOM05D005169 ORTHO05D006436 1.8e-28 129.8 143 51.0
Atru.chr6.2317 Acer truncatum HOM05D005169 ORTHO05D006256 2.4e-28 129.4 156 50.6
Lsat_1_v5_gn_2_91781 Lactuca sativa HOM05D005169 ORTHO05D006436 2.4e-28 129.4 150 51.3
Peaxi162Scf00129g00124 Petunia axillaris HOM05D005169 ORTHO05D006436 4.1e-28 128.6 165 47.3
Thecc.04G011300 Theobroma cacao HOM05D005169 ORTHO05D006436 4.1e-28 128.6 174 46.0
A10p23980 Brassica napus HOM05D005169 ORTHO05D006436 5.3e-28 128.3 204 40.7
Manes.15G165700 Manihot esculenta HOM05D005169 ORTHO05D006436 5.3e-28 128.3 168 44.6
Psat1g056720 Pisum sativum HOM05D005169 ORTHO05D006436 2.0e-27 126.3 175 42.3
Sed0004184 Sechium edule HOM05D005169 ORTHO05D006436 2.0e-27 126.3 153 47.1
BolC9t59083H Brassica oleracea HOM05D005169 ORTHO05D006436 3.5e-27 125.6 205 40.0
Oeu062928.1 Olea europaea HOM05D005169 ORTHO05D006436 3.5e-27 125.6 176 47.7
THA.LOC104821080 Tarenaya hassleriana HOM05D005169 ORTHO05D006436 3.5e-27 125.6 185 43.2
Lsat_1_v5_gn_4_182740 Lactuca sativa HOM05D005169 ORTHO05D006436 5.9e-27 124.8 147 51.0
HanXRQChr07g0198841 Helianthus annuus HOM05D005169 ORTHO05D006436 2.2e-26 122.9 144 48.6
PGSC0003DMG400000520 Solanum tuberosum HOM05D005169 ORTHO05D006436 2.2e-26 122.9 181 41.4
ECA232G1653 Erigeron canadensis HOM05D005169 ORTHO05D006436 2.9e-26 122.5 120 53.3
Ciclev10016934m.g Citrus clementina HOM05D005169 ORTHO05D006436 3.8e-26 122.1 176 45.5
Nn3g16854 Nelumbo nucifera HOM05D005169 ORTHO05D006436 3.8e-26 122.1 182 41.2
Migut.K01374 Erythranthe guttata HOM05D005169 ORTHO05D006436 8.5e-26 120.9 140 47.1
CANSAT64G1588 Cannabis sativa HOM05D005169 ORTHO05D006436 1.5e-25 120.2 160 46.9
FAN05G4915 Fragaria x ananassa HOM05D005169 ORTHO05D006436 1.5e-25 120.2 145 44.8
FAN09G4345 Fragaria x ananassa HOM05D005169 ORTHO05D006436 1.5e-25 120.2 153 44.4
MBI16_g27097_MAGBIO Magnolia biondii HOM05D005169 ORTHO05D006436 3.2e-25 119.0 159 45.9
Solyc02g086760.1 Solanum lycopersicum HOM05D005169 ORTHO05D006436 3.2e-25 119.0 182 40.1
Sopen02g031520 Solanum pennellii HOM05D005169 ORTHO05D006436 5.5e-25 118.2 183 39.9
Oeu043043.1 Olea europaea HOM05D005169 ORTHO05D006436 7.2e-25 117.9 176 44.3
Solyc12g062840.1 Solanum lycopersicum HOM05D005169 ORTHO05D006436 7.2e-25 117.9 145 47.6
DCAR_015051 Daucus carota HOM05D005169 ORTHO05D006436 1.6e-24 116.7 140 50.0
FAN14G0546 Fragaria x ananassa HOM05D005169 ORTHO05D006436 1.6e-24 116.7 158 43.0
RcHm_v2.0_Chr2g0172251 Rosa chinensis HOM05D005169 ORTHO05D006436 1.6e-24 116.7 159 43.4
TWI56G0416 Tripterygium wilfordii HOM05D005169 ORTHO05D006436 1.6e-24 116.7 144 47.2
SGA_v2.0_scaffold135G34886 Striga asiatica HOM05D005169 ORTHO05D006436 2.1e-24 116.3 150 44.0
Aa31LG5G10650 Aethionema arabicum HOM05D005169 ORTHO05D006436 2.7e-24 115.9 144 49.3
PSO017G2305 Papaver somniferum HOM05D005169 ORTHO05D006436 2.7e-24 115.9 216 38.0
AUR62023410 Chenopodium quinoa HOM05D005169 ORTHO05D006436 8.0e-24 114.4 167 44.3
AUR62013741 Chenopodium quinoa HOM05D005169 ORTHO05D006436 1.0e-23 114.0 167 44.3
PGR142G3938 Punica granatum HOM05D005169 ORTHO05D006436 1.0e-23 114.0 146 47.9
CARHR075420 Cardamine hirsuta HOM05D005169 ORTHO05D006436 1.8e-23 113.2 160 42.5
FvH4_6g50860 Fragaria vesca HOM05D005169 ORTHO05D006436 2.3e-23 112.8 207 39.6
Lalb_Chr06g0175951 Lupinus albus HOM05D005169 ORTHO05D006436 2.3e-23 112.8 150 47.3
PSO478G0492 Papaver somniferum HOM05D005169 ORTHO05D006436 2.3e-23 112.8 220 36.4
EL10Ac1g00764 Beta vulgaris HOM05D005169 ORTHO05D006436 3.0e-23 112.5 163 44.8
MSTRG.3296 Avicennia marina HOM05D005169 ORTHO05D006436 4.0e-23 112.1 143 44.8
FAN05G3636 Fragaria x ananassa HOM05D005169 ORTHO05D006436 5.2e-23 111.7 149 43.0
Sc16g0007930 Simmondsia chinensis HOM05D005169 ORTHO05D006436 6.8e-23 111.3 130 48.5
BcaC03g13455 Brassica carinata HOM05D005169 ORTHO05D006436 8.8e-23 110.9 177 42.4
SGA_v2.0_scaffold30G12455 Striga asiatica HOM05D005169 ORTHO05D006436 8.8e-23 110.9 169 44.4
Lalb_Chr21g0319501 Lupinus albus HOM05D005169 ORTHO05D006436 1.5e-22 110.2 153 45.1
Nitab4.5_0014517g0010 Nicotiana tabacum HOM05D005169 ORTHO05D006436 1.5e-22 110.2 201 36.8
BcaC05g30410 Brassica carinata HOM05D005169 ORTHO05D006436 2.6e-22 109.4 169 43.8
Migut.H00106 Erythranthe guttata HOM05D005169 ORTHO05D006436 7.5e-22 107.8 146 45.2
Thhalv10021959m.g Eutrema salsugineum HOM05D005169 ORTHO05D006436 7.5e-22 107.8 159 42.8
AT3G01516 Arabidopsis thaliana HOM05D005169 ORTHO05D006436 9.8e-22 107.5 154 42.9
Carub.0003s0056 Capsella rubella HOM05D005169 ORTHO05D006436 9.8e-22 107.5 174 39.7
Cpa.g.sc3104.1 Carica papaya HOM05D005169 ORTHO05D006436 9.8e-22 107.5 113 55.8
SalBow7G2461 Salvia bowleyana HOM05D005169 ORTHO05D006436 9.8e-22 107.5 141 48.9
TPR.G10806 Trifolium pratense HOM05D005169 ORTHO05D006436 9.8e-22 107.5 98 57.1
C09p75080 Brassica napus HOM05D005169 ORTHO05D006436 1.3e-21 107.1 169 43.2
BolC5t35156H Brassica oleracea HOM05D005169 ORTHO05D006436 1.3e-21 107.1 169 43.2
SHI27192 Sapria himalayana HOM05D005169 ORTHO05D006436 2.8e-21 105.9 147 40.8
Sp3g00540 Schrenkiella parvula HOM05D005169 ORTHO05D006436 2.8e-21 105.9 181 38.7
A05p44490 Brassica napus HOM05D005169 ORTHO05D006436 3.7e-21 105.5 169 42.6
BraA05t23207Z Brassica rapa HOM05D005169 ORTHO05D006436 3.7e-21 105.5 169 42.6
Sp6g29350 Schrenkiella parvula HOM05D005169 ORTHO05D006436 3.7e-21 105.5 221 33.9
Glyma.05G006400 Glycine max HOM05D005169 ORTHO05D006436 8.3e-21 104.4 129 45.7
TPR.G35382 Trifolium pratense HOM05D005169 ORTHO05D006436 1.1e-20 104.0 112 50.9
Ah.05g173110 Amaranthus hybridus HOM05D005169 ORTHO05D006436 2.4e-20 102.8 173 40.5
CARHR198620 Cardamine hirsuta HOM05D005169 ORTHO05D006436 5.4e-20 101.7 217 34.1
AL6G25460 Arabidopsis lyrata HOM05D005169 ORTHO05D006436 1.6e-19 100.1 218 34.4
AL3G10640 Arabidopsis lyrata HOM05D005169 ORTHO05D006436 3.5e-19 99.0 196 36.2
DCAR_021693 Daucus carota HOM05D005169 ORTHO05D006436 5.9e-19 98.2 131 48.1
BcaC05g30449 Brassica carinata HOM05D005169 ORTHO05D006436 1.0e-18 97.4 170 39.4
Glyma.19G006800 Glycine max HOM05D005169 ORTHO05D006436 1.3e-18 97.1 149 43.6
Sopen12g026520 Solanum pennellii HOM05D005169 ORTHO05D006436 1.3e-18 97.1 87 58.6
PSO170G4554 Papaver somniferum HOM05D005169 ORTHO05D006436 8.6e-18 94.4 187 38.5
ATR0730G202 Amborella trichopoda HOM05D005169 ORTHO05D006436 1.1e-17 94.0 120 44.2
BraA02t05235Z Brassica rapa HOM05D005169 ORTHO05D006436 1.1e-17 94.0 214 35.5
Carub.0006s1286 Capsella rubella HOM05D005169 ORTHO05D006436 1.1e-17 94.0 231 33.3
AT5G14690 Arabidopsis thaliana HOM05D005169 ORTHO05D006436 1.5e-17 93.6 226 31.0
BcaNung03104 Brassica carinata HOM05D005169 ORTHO05D006436 5.5e-17 91.7 216 35.2
Thhalv10014646m.g Eutrema salsugineum HOM05D005169 ORTHO05D006436 2.8e-16 89.4 219 32.4
PSO144G0121 Papaver somniferum HOM05D005169 ORTHO05D006436 3.6e-16 89.0 194 37.1
Aa31LG11G14770 Aethionema arabicum HOM05D005169 ORTHO05D006436 5.2e-15 85.1 243 30.5
Ah.03g141220 Amaranthus hybridus HOM05D005169 ORTHO05D006436 4.4e-14 82.0 92 48.9
C02p07220 Brassica napus HOM05D005169 ORTHO05D006436 1.7e-13 80.1 104 45.2
BolC2t06654H Brassica oleracea HOM05D005169 ORTHO05D006436 1.7e-13 80.1 104 45.2
Os01g0638800 Oryza sativa ssp. japonica HOM05D005169 ORTHO05D006436 1.1e-12 77.4 143 37.1
unitig_899.g15487 Utricularia gibba HOM05D005169 ORTHO05D006436 1.1e-12 77.4 118 40.7
CDE07G0703 Ceratophyllum demersum HOM05D005169 ORTHO05D006436 1.2e-11 73.9 79 50.6
HPP92_024720 Vanilla planifolia HOM05D005169 ORTHO05D006436 1.6e-11 73.6 119 35.3
SEGI_21704 Sequoiadendron giganteum HOM05D005169 ORTHO05D006436 3.5e-11 72.4 144 33.3
HPP92_008039 Vanilla planifolia HOM05D005169 ORTHO05D006436 7.8e-11 71.2 148 33.1
MD09G1031300 Malus domestica HOM05D005169 ORTHO05D006436 1.3e-10 70.5 96 47.9
Duzib147G0144 Durio zibethinus HOM05D005169 ORTHO05D006436 1.5e-09 67.0 122 40.2
Zm00001eb157680 Zea mays HOM05D005169 ORTHO05D006436 5.6e-09 65.1 159 33.3
Zm00001eb296260 Zea mays HOM05D005169 ORTHO05D006436 9.5e-09 64.3 134 40.3
SEGI_19138 Sequoiadendron giganteum HOM05D005169 ORTHO05D006436 6.8e-07 58.2 120 29.2
Phvul.004G012300 Phaseolus vulgaris HOM05D005169 ORTHO05D006436 1.2e-06 57.4 147 31.3
VMungo0464G1178 Vigna mungo HOM05D005169 ORTHO05D006436 4.4e-06 55.5 132 32.6
CDE06G1771 Ceratophyllum demersum HOM05D000110 ORTHO05D000024 9.8e-06 54.3 46 47.8


User provided reference genes

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