Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0037767 Camellia sinensis var. sinensis HOM05D006014 ORTHO05D007608 4.7e-92 341.3 183 100.0
Dinv14938 Davidia involucrata HOM05D006014 ORTHO05D007608 6.4e-65 251.1 187 74.9
Hma1.2p1_1411F.1_g281760 Hydrangea macrophylla HOM05D006014 ORTHO05D007608 1.0e-62 243.8 188 73.9
Nitab4.5_0003033g0060 Nicotiana tabacum HOM05D006014 ORTHO05D007608 1.3e-62 243.4 173 76.9
Ciclev10009636m.g Citrus clementina HOM05D006014 ORTHO05D007608 2.3e-62 242.7 175 76.6
DCAR_019570 Daucus carota HOM05D006014 ORTHO05D007608 1.2e-60 236.9 189 71.4
Manes.15G089600 Manihot esculenta HOM05D006014 ORTHO05D007608 1.6e-60 236.5 180 74.4
Cc05_g11740 Coffea canephora HOM05D006014 ORTHO05D007608 4.7e-60 235.0 180 71.1
MD03G1232600 Malus domestica HOM05D006014 ORTHO05D007608 2.0e-58 229.6 178 73.0
GSVIVG01014290001 Vitis vinifera HOM05D006014 ORTHO05D007608 2.6e-58 229.2 180 71.7
ClCG11G017820 Citrullus lanatus HOM05D006014 ORTHO05D007608 1.7e-57 226.5 180 71.1
Nitab4.5_0013317g0010 Nicotiana tabacum HOM05D006014 ORTHO05D007608 1.7e-57 226.5 172 72.7
CiPaw.11G167800 Carya illinoinensis HOM05D006014 ORTHO05D007608 2.2e-57 226.1 152 80.3
Haze_09409 Corylus avellana HOM05D005607 ORTHO05D008142 2.9e-57 225.7 145 82.8
Thecc.07G096300 Theobroma cacao HOM05D006014 ORTHO05D007608 4.9e-57 224.9 177 71.8
Prupe.4G176000 Prunus persica HOM05D006014 ORTHO05D007608 6.4e-57 224.6 179 71.5
MD11G1253300 Malus domestica HOM05D006014 ORTHO05D007608 8.3e-57 224.2 171 74.3
QL08p024005 Quercus lobata HOM05D006014 ORTHO05D007608 1.1e-56 223.8 180 69.4
Sed0004006 Sechium edule HOM05D006014 ORTHO05D007608 1.4e-56 223.4 182 69.2
Solyc07g062870.3 Solanum lycopersicum HOM05D006014 ORTHO05D007608 4.1e-56 221.9 173 69.9
Sopen07g031070 Solanum pennellii HOM05D006014 ORTHO05D007608 4.1e-56 221.9 173 69.9
MELO3C025609.2 Cucumis melo HOM05D006014 ORTHO05D007608 5.4e-56 221.5 180 72.2
FvH4_3g19430 Fragaria vesca HOM05D006014 ORTHO05D007608 5.4e-56 221.5 171 72.5
FAN11G2300 Fragaria x ananassa HOM05D006014 ORTHO05D007608 5.4e-56 221.5 171 72.5
FAN21G0470 Fragaria x ananassa HOM05D006014 ORTHO05D007608 7.1e-56 221.1 171 71.9
Nn1g04203 Nelumbo nucifera HOM05D006014 ORTHO05D007608 7.1e-56 221.1 180 70.6
TAR626G1430 Trochodendron aralioides HOM05D006014 ORTHO05D007608 2.1e-55 219.5 187 71.1
CsaV3_4G033460 Cucumis sativus L. HOM05D006014 ORTHO05D007608 3.5e-55 218.8 180 71.1
FAN25G0078 Fragaria x ananassa HOM05D006014 ORTHO05D007608 4.6e-55 218.4 171 71.3
RcHm_v2.0_Chr5g0032711 Rosa chinensis HOM05D006014 ORTHO05D007608 7.8e-55 217.6 171 71.9
TWI38G2086 Tripterygium wilfordii HOM05D006014 ORTHO05D007608 1.0e-54 217.2 176 69.3
Peaxi162Scf00069g01737 Petunia axillaris HOM05D006014 ORTHO05D007608 1.3e-54 216.9 172 69.8
Duzib170G0605 Durio zibethinus HOM05D006014 ORTHO05D007608 1.7e-54 216.5 183 68.3
Sabra16G0259700 Salix brachista HOM05D006014 ORTHO05D007608 1.7e-54 216.5 174 70.7
CANSAT35G1465 Cannabis sativa HOM05D006014 ORTHO05D007608 2.3e-54 216.1 177 70.6
Migut.H01957 Erythranthe guttata HOM05D006014 ORTHO05D007608 2.3e-54 216.1 184 70.1
Oeu051088.1 Olea europaea HOM05D006014 ORTHO05D007608 3.9e-54 215.3 168 73.2
Potri.001G396600 Populus trichocarpa HOM05D006014 ORTHO05D007608 1.9e-53 213.0 174 70.7
Nitab4.5_0000332g0180 Nicotiana tabacum HOM05D006014 ORTHO05D007608 5.6e-53 211.5 174 69.0
PGR083G0398 Punica granatum HOM05D006014 ORTHO05D007608 5.6e-53 211.5 181 68.5
Rhsim04G0022600 Rhododendron simsii HOM05D006014 ORTHO05D007608 5.6e-53 211.5 181 66.3
PGSC0003DMG400012405 Solanum tuberosum HOM05D006014 ORTHO05D007608 5.6e-53 211.5 173 68.2
TAR624G0768 Trochodendron aralioides HOM05D006014 ORTHO05D007608 9.5e-53 210.7 152 75.0
Lsat_1_v5_gn_5_128220 Lactuca sativa HOM05D006014 ORTHO05D007608 1.2e-52 210.3 180 68.3
Gohir.D05G347800 Gossypium hirsutum HOM05D006014 ORTHO05D007608 1.6e-52 209.9 178 67.4
Gorai.009G375600 Gossypium raimondii HOM05D006014 ORTHO05D007608 1.6e-52 209.9 178 67.4
Oeu037371.1 Olea europaea HOM05D006014 ORTHO05D007608 3.6e-52 208.8 165 70.9
Gohir.A04G035600 Gossypium hirsutum HOM05D006014 ORTHO05D007608 4.7e-52 208.4 178 68.0
MSTRG.12894 Avicennia marina HOM05D006014 ORTHO05D007608 1.8e-51 206.5 179 67.6
Eucgr.F01167 Eucalyptus grandis HOM05D006014 ORTHO05D007608 2.4e-51 206.1 175 69.7
COL.COLO4_03477 Corchorus olitorius HOM05D006014 ORTHO05D007608 3.1e-51 205.7 180 67.8
BolC1t04895H Brassica oleracea HOM05D006014 ORTHO05D007608 8.9e-51 204.1 191 64.9
Glyma.12G162300 Glycine max HOM05D006014 ORTHO05D007608 1.5e-50 203.4 181 69.1
PSO675G1148 Papaver somniferum HOM05D006014 ORTHO05D007608 1.5e-50 203.4 156 70.5
C01p49380 Brassica napus HOM05D006014 ORTHO05D007608 2.6e-50 202.6 194 63.9
Nitab4.5_0002330g0100 Nicotiana tabacum HOM05D006014 ORTHO05D007608 3.4e-50 202.2 188 63.3
PSO541G1420 Papaver somniferum HOM05D006014 ORTHO05D007608 4.4e-50 201.8 168 67.3
Lj3g0022855 Lotus japonicus HOM05D006014 ORTHO05D007608 5.8e-50 201.4 177 67.2
Glyma.06G236200 Glycine max HOM05D006014 ORTHO05D007608 9.9e-50 200.7 181 69.1
THA.LOC104815561 Tarenaya hassleriana HOM05D006014 ORTHO05D007608 1.3e-49 200.3 192 64.6
Sp3g13400 Schrenkiella parvula HOM05D006014 ORTHO05D007608 1.7e-49 199.9 200 62.5
Sc03g0010200 Simmondsia chinensis HOM05D006014 ORTHO05D007608 4.9e-49 198.4 174 65.5
TPR.G28172 Trifolium pratense HOM05D006014 ORTHO05D007608 4.9e-49 198.4 175 68.0
HanXRQChr10g0302621 Helianthus annuus HOM05D006014 ORTHO05D007608 6.4e-49 198.0 181 64.6
A01p38830 Brassica napus HOM05D006014 ORTHO05D007608 4.1e-48 195.3 189 63.0
BraA01t03929Z Brassica rapa HOM05D006014 ORTHO05D007608 4.1e-48 195.3 189 63.0
SalBow8G3070 Salvia bowleyana HOM05D006014 ORTHO05D007608 7.1e-48 194.5 181 63.0
BcaB04g20944 Brassica carinata HOM05D006014 ORTHO05D007608 9.2e-48 194.1 184 63.6
Cfa020606 Carpinus fangiana HOM05D006014 ORTHO05D007608 9.2e-48 194.1 126 83.3
VMungo1127G0848 Vigna mungo HOM05D006014 ORTHO05D007608 1.2e-47 193.7 186 65.6
Psat4g136440 Pisum sativum HOM05D006014 ORTHO05D007608 2.1e-47 193.0 174 64.9
A03p39200 Brassica napus HOM05D006014 ORTHO05D007608 4.6e-47 191.8 200 62.0
Aqoxy1G02326 Aquilegia oxysepala HOM05D006014 ORTHO05D007608 6.0e-47 191.4 179 61.5
AUR62036161 Chenopodium quinoa HOM05D006014 ORTHO05D007608 7.8e-47 191.0 176 64.8
ECA234G0345 Erigeron canadensis HOM05D006014 ORTHO05D007608 1.0e-46 190.7 175 66.9
Ca_23028_v3 Cicer arietinum L. HOM05D006014 ORTHO05D007608 1.3e-46 190.3 167 67.1
Ca_23030_v3 Cicer arietinum L. HOM05D006014 ORTHO05D007608 1.3e-46 190.3 167 67.1
BraA03t13069Z Brassica rapa HOM05D006014 ORTHO05D007608 1.7e-46 189.9 199 61.8
Ah.06g184580 Amaranthus hybridus HOM05D006014 ORTHO05D007608 3.0e-46 189.1 177 62.7
CARHR090180 Cardamine hirsuta HOM05D006014 ORTHO05D007608 3.0e-46 189.1 190 62.1
AUR62019472 Chenopodium quinoa HOM05D006014 ORTHO05D007608 5.1e-46 188.3 176 64.2
CDE10G0058 Ceratophyllum demersum HOM05D006014 ORTHO05D007608 8.7e-46 187.6 172 65.1
Phvul.011G162800 Phaseolus vulgaris HOM05D006014 ORTHO05D007608 8.7e-46 187.6 186 62.9
Hund04492 Selenicereus undatus HOM05D006014 ORTHO05D007608 8.7e-46 187.6 177 62.1
Lalb_Chr07g0182891 Lupinus albus HOM05D006014 ORTHO05D007608 1.5e-45 186.8 170 64.1
EL10Ac4g08237 Beta vulgaris HOM05D006014 ORTHO05D007608 1.9e-45 186.4 176 63.1
A05p34280 Brassica napus HOM05D006014 ORTHO05D007608 1.9e-45 186.4 196 60.2
BraA05t22249Z Brassica rapa HOM05D006014 ORTHO05D007608 1.9e-45 186.4 196 60.2
AL3G27580 Arabidopsis lyrata HOM05D006014 ORTHO05D007608 4.3e-45 185.3 188 62.2
BcaB06g29543 Brassica carinata HOM05D006014 ORTHO05D007608 4.3e-45 185.3 199 59.8
AT3G15190 Arabidopsis thaliana HOM05D006014 ORTHO05D007608 5.6e-45 184.9 196 61.2
CDE10G1292 Ceratophyllum demersum HOM05D006014 ORTHO05D007608 7.3e-45 184.5 172 64.5
Actinidia35240 Actinidia chinensis HOM05D006014 ORTHO05D007608 1.6e-44 183.3 118 84.7
Carub.0003s1484 Capsella rubella HOM05D006014 ORTHO05D007608 2.1e-44 183.0 193 59.1
arahy.Tifrunner.gnm1.ann1.FY4UJ9 Arachis hypogaea HOM05D006014 ORTHO05D007608 2.8e-44 182.6 217 53.9
Thhalv10021521m.g Eutrema salsugineum HOM05D006014 ORTHO05D007608 2.8e-44 182.6 203 58.6
MBI07_g30170_MAGBIO Magnolia biondii HOM05D006014 ORTHO05D007608 4.7e-44 181.8 131 74.0
Aa31LG8G2390 Aethionema arabicum HOM05D006014 ORTHO05D007608 8.1e-44 181.0 197 56.3
BcaC01g03887 Brassica carinata HOM05D006014 ORTHO05D007608 1.4e-43 180.3 120 78.3
C03p47570 Brassica napus HOM05D006014 ORTHO05D007608 1.4e-43 180.3 120 78.3
C05p52040 Brassica napus HOM05D006014 ORTHO05D007608 1.8e-43 179.9 199 57.3
BolC3t17032H Brassica oleracea HOM05D006014 ORTHO05D007608 3.1e-43 179.1 120 77.5
TWI39G1175 Tripterygium wilfordii HOM05D006014 ORTHO05D007608 4.0e-43 178.7 128 75.0
Medtr8g061350 Medicago truncatula HOM05D006014 ORTHO05D007608 9.0e-43 177.6 169 63.3
unitig_749.g13531 Utricularia gibba HOM05D005607 ORTHO05D008142 2.0e-42 176.4 175 63.4
Sed0026173 Sechium edule HOM05D006014 ORTHO05D007608 3.4e-42 175.6 176 60.2
ATR0737G141 Amborella trichopoda HOM05D006014 ORTHO05D007608 5.4e-40 168.3 116 75.9
SEGI_01083 Sequoiadendron giganteum HOM05D006014 ORTHO05D007608 3.6e-36 155.6 167 54.5
arahy.Tifrunner.gnm1.ann1.QT5AN8 Arachis hypogaea HOM05D006014 ORTHO05D007608 6.2e-36 154.8 270 43.0
Lj8A154T77 Lonicera japonica HOM05D006014 ORTHO05D007608 9.9e-34 147.5 177 53.7
Lj3g0017472 Lotus japonicus HOM05D006014 ORTHO05D007608 1.4e-32 143.7 112 69.6
Mapoly0009s0159 Marchantia polymorpha HOM05D006014 ORTHO05D007608 2.4e-32 142.9 174 52.9
SGA_v2.0_scaffold70G23686 Striga asiatica HOM05D006014 ORTHO05D007608 4.3e-29 132.1 345 35.1
Zm00001eb360330 Zea mays HOM05D006014 ORTHO05D007608 3.7e-28 129.0 163 49.7
BcaC09g48477 Brassica carinata HOM05D006014 ORTHO05D007608 8.1e-28 127.9 147 58.5
Os01g0678600 Oryza sativa ssp. japonica HOM05D006014 ORTHO05D007608 3.1e-27 125.9 189 46.6
Pp3c24_17080 Physcomitrium patens HOM05D006014 ORTHO05D007608 1.2e-26 124.0 149 55.7
Pp3c20_13390 Physcomitrium patens HOM05D006014 ORTHO05D007608 1.7e-25 120.2 113 58.4
vmacro09523 Vaccinium macrocarpon HOM05D006014 ORTHO05D007608 1.1e-24 117.5 80 72.5
CBR_g30802 Chara braunii HOM05D006014 ORTHO05D007608 9.3e-24 114.4 155 49.7
AagrBONN_evm.TU.Sc2ySwM_344.3794 Anthoceros agrestis HOM05D006014 ORTHO05D007608 5.1e-22 108.6 179 43.6
Dinv20203 Davidia involucrata HOM05D006014 ORTHO05D007608 3.3e-21 105.9 101 66.3
Gohir.A13G146850 Gossypium hirsutum HOM05D006014 ORTHO05D007608 1.3e-17 94.0 66 75.8
CBR_g39307 Chara braunii HOM05D006014 ORTHO05D007608 1.7e-17 93.6 83 60.2
Cpa.g.sc131.85 Carica papaya HOM05D006014 ORTHO05D007608 6.5e-17 91.7 108 57.4
Cre12.g494750 Chlamydomonas reinhardtii HOM05D006014 ORTHO05D007608 2.3e-14 83.2 151 41.1
Atru.chr2.2408 Acer truncatum HOM05D006014 ORTHO05D007608 3.1e-11 72.8 53 77.4
MCO10G118 Micromonas commoda HOM05D006014 ORTHO05D007608 6.9e-11 71.6 91 45.1
HPP92_010061 Vanilla planifolia HOM05D006014 ORTHO05D007608 3.4e-10 69.3 75 60.0
QL11p029078 Quercus lobata HOM05D006014 ORTHO05D013998 2.5e-08 63.2 80 48.8


User provided reference genes

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