Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0037760 Camellia sinensis var. sinensis HOM05D005922 ORTHO05D006934 2.8e-224 781.6 373 100.0
CSS0049283 Camellia sinensis var. sinensis HOM05D005922 ORTHO05D006934 1.9e-212 742.3 406 89.7
Actinidia20108 Actinidia chinensis HOM05D005922 ORTHO05D006934 7.1e-172 607.4 407 75.2
Rhsim09G0086000 Rhododendron simsii HOM05D005922 ORTHO05D006934 3.2e-164 582.0 400 74.2
TAR622G0311 Trochodendron aralioides HOM05D005922 ORTHO05D006934 6.1e-139 498.0 405 63.7
Lj3A860T49 Lonicera japonica HOM05D005922 ORTHO05D006934 1.5e-137 493.4 403 63.5
GSVIVG01011600001 Vitis vinifera HOM05D005922 ORTHO05D006934 4.4e-129 465.3 397 60.7
Nn4g24501 Nelumbo nucifera HOM05D005922 ORTHO05D006934 5.4e-127 458.4 408 58.3
MD16G1013700 Malus domestica HOM05D005922 ORTHO05D006934 3.5e-126 455.7 389 61.4
RcHm_v2.0_Chr4g0442081 Rosa chinensis HOM05D005922 ORTHO05D006934 1.3e-125 453.8 397 61.2
FAN17G1819 Fragaria x ananassa HOM05D005922 ORTHO05D006934 2.9e-125 452.6 389 60.7
QL03p038994 Quercus lobata HOM05D005922 ORTHO05D006934 2.9e-125 452.6 392 59.2
Ciclev10015473m.g Citrus clementina HOM05D005922 ORTHO05D006934 5.0e-125 451.8 401 59.1
FAN12G4156 Fragaria x ananassa HOM05D005922 ORTHO05D006934 2.5e-124 449.5 390 60.0
Manes.17G088400 Manihot esculenta HOM05D005922 ORTHO05D006934 4.2e-124 448.7 400 58.0
FvH4_4g33040 Fragaria vesca HOM05D005922 ORTHO05D006934 7.2e-124 448.0 390 60.0
CAN.G282.103 Capsicum annuum HOM05D005922 ORTHO05D006934 1.4e-122 443.7 401 55.9
FAN22G1644 Fragaria x ananassa HOM05D005922 ORTHO05D006934 4.0e-122 442.2 396 59.6
FAN07G1633 Fragaria x ananassa HOM05D005922 ORTHO05D006934 6.8e-122 441.4 390 59.5
Cc11_g05840 Coffea canephora HOM05D005922 ORTHO05D006934 1.5e-121 440.3 393 58.3
CiPaw.06G059000 Carya illinoinensis HOM05D005922 ORTHO05D006934 2.6e-121 439.5 402 58.7
TWI74G0639 Tripterygium wilfordii HOM05D005922 ORTHO05D006934 2.6e-121 439.5 396 56.6
Lalb_Chr13g0293631 Lupinus albus HOM05D005922 ORTHO05D006934 5.7e-121 438.3 391 57.8
Solyc01g005100.4 Solanum lycopersicum HOM05D005922 ORTHO05D006934 7.5e-121 438.0 402 55.5
Sopen01g001120 Solanum pennellii HOM05D005922 ORTHO05D006934 6.3e-120 434.9 402 55.5
PGSC0003DMG400022790 Solanum tuberosum HOM05D005922 ORTHO05D006934 1.1e-119 434.1 395 55.2
Aqoxy3G04113 Aquilegia oxysepala HOM05D005922 ORTHO05D006934 1.8e-119 433.3 397 56.7
MSTRG.418 Avicennia marina HOM05D005922 ORTHO05D006934 2.4e-119 433.0 391 57.0
Lj4g0028223 Lotus japonicus HOM05D005922 ORTHO05D006934 2.0e-118 429.9 393 56.7
Dinv14365 Davidia involucrata HOM05D001297 ORTHO05D001135 4.5e-118 428.7 370 62.7
HanXRQChr17g0566161 Helianthus annuus HOM05D005922 ORTHO05D006934 1.3e-117 427.2 392 54.6
PSO478G3575 Papaver somniferum HOM05D005922 ORTHO05D006934 6.6e-117 424.9 401 56.6
ECA234G0994 Erigeron canadensis HOM05D005922 ORTHO05D006934 8.6e-117 424.5 404 53.7
Migut.L00620 Erythranthe guttata HOM05D005922 ORTHO05D006934 8.6e-117 424.5 393 55.0
Gorai.012G183700 Gossypium raimondii HOM05D005922 ORTHO05D006934 7.3e-116 421.4 390 55.4
Duzib248G0719 Durio zibethinus HOM05D005922 ORTHO05D006934 2.1e-115 419.9 373 57.1
Prupe.1G337400 Prunus persica HOM05D005922 ORTHO05D006934 6.1e-115 418.3 382 58.6
PSO017G1338 Papaver somniferum HOM05D005922 ORTHO05D006934 1.0e-114 417.5 395 56.5
arahy.Tifrunner.gnm1.ann1.DV72QU Arachis hypogaea HOM05D005922 ORTHO05D006934 1.8e-114 416.8 391 54.2
Sc10g0003730 Simmondsia chinensis HOM05D005922 ORTHO05D006934 5.2e-114 415.2 376 57.4
TPR.G5128 Trifolium pratense HOM05D005922 ORTHO05D006934 5.7e-113 411.8 388 55.7
Eucgr.B02658 Eucalyptus grandis HOM05D005922 ORTHO05D006934 7.5e-113 411.4 395 54.7
Phvul.002G181600 Phaseolus vulgaris HOM05D005922 ORTHO05D006934 9.8e-113 411.0 392 52.8
CDE05G0039 Ceratophyllum demersum HOM05D005922 ORTHO05D006934 2.2e-112 409.8 373 54.4
Psat7g084400 Pisum sativum HOM05D005922 ORTHO05D006934 1.1e-111 407.5 392 54.6
Ca_11580_v3 Cicer arietinum L. HOM05D005922 ORTHO05D006934 2.4e-111 406.4 396 53.5
Glyma.08G093700 Glycine max HOM05D005922 ORTHO05D006934 5.4e-111 405.2 394 53.8
Thhalv10018688m.g Eutrema salsugineum HOM05D005922 ORTHO05D006934 1.2e-110 404.1 391 56.0
Lsat_1_v5_gn_4_23861 Lactuca sativa HOM05D005922 ORTHO05D006934 2.0e-110 403.3 376 56.1
Carub.0002s1456 Capsella rubella HOM05D005922 ORTHO05D006934 4.6e-110 402.1 395 55.2
AL2G26830 Arabidopsis lyrata HOM05D005922 ORTHO05D006934 1.0e-109 401.0 400 54.8
BcaB03g15398 Brassica carinata HOM05D005922 ORTHO05D006934 5.0e-109 398.7 396 54.8
EL10Ac6g14554 Beta vulgaris HOM05D005922 ORTHO05D006934 1.2e-107 394.0 403 51.1
AUR62007770 Chenopodium quinoa HOM05D005922 ORTHO05D006934 1.6e-107 393.7 401 51.6
Sed0026869 Sechium edule HOM05D005922 ORTHO05D006934 2.1e-107 393.3 399 52.6
Hund05787 Selenicereus undatus HOM05D005922 ORTHO05D006934 2.8e-107 392.9 437 49.9
BcaC08g45999 Brassica carinata HOM05D005922 ORTHO05D006934 5.2e-106 388.7 393 52.9
BolC6t38893H Brassica oleracea HOM05D005922 ORTHO05D006934 5.2e-106 388.7 393 52.9
C06p37940 Brassica napus HOM05D005922 ORTHO05D006934 1.5e-105 387.1 395 53.4
Potri.008G139000 Populus trichocarpa HOM05D005922 ORTHO05D006934 2.6e-105 386.3 386 54.9
unitig_748.g7591 Utricularia gibba HOM05D005922 ORTHO05D006934 4.4e-105 385.6 387 51.9
BraA07t30847Z Brassica rapa HOM05D005922 ORTHO05D006934 7.5e-105 384.8 395 52.2
A07p32170 Brassica napus HOM05D005922 ORTHO05D006934 3.7e-104 382.5 395 52.2
AUR62002964 Chenopodium quinoa HOM05D005922 ORTHO05D006934 8.3e-104 381.3 405 49.9
MELO3C020028.2 Cucumis melo HOM05D005922 ORTHO05D006934 5.4e-103 378.6 394 51.8
CsaV3_5G013220 Cucumis sativus L. HOM05D005922 ORTHO05D006934 2.7e-102 376.3 393 51.4
THA.LOC104809799 Tarenaya hassleriana HOM05D005922 ORTHO05D006934 1.7e-101 373.6 399 52.1
Nitab4.5_0000521g0110 Nicotiana tabacum HOM05D005922 ORTHO05D006934 2.3e-101 373.2 448 46.4
PGR102G1589 Punica granatum HOM05D005922 ORTHO05D006934 2.3e-101 373.2 407 51.6
Glyma.05G138500 Glycine max HOM05D005922 ORTHO05D006934 1.5e-100 370.5 256 69.1
Gohir.D04G188200 Gossypium hirsutum HOM05D005922 ORTHO05D006934 4.3e-100 369.0 325 57.2
MBI19_g25220_MAGBIO Magnolia biondii HOM05D005922 ORTHO05D006934 4.3e-100 369.0 386 51.8
Sabra08G0105600 Salix brachista HOM05D005922 ORTHO05D006934 4.7e-99 365.5 414 50.0
DCAR_026820 Daucus carota HOM05D005922 ORTHO05D006934 8.1e-99 364.8 373 53.4
Sp5g23080 Schrenkiella parvula HOM05D005922 ORTHO05D006934 6.8e-98 361.7 344 56.7
ClCG11G001170 Citrullus lanatus HOM05D005922 ORTHO05D006934 8.9e-98 361.3 394 51.0
SGA_v2.0_scaffold57G20105 Striga asiatica HOM05D005922 ORTHO05D006934 8.9e-98 361.3 400 51.0
Gohir.A04G143900 Gossypium hirsutum HOM05D005922 ORTHO05D006934 6.4e-96 355.1 347 53.3
Aa31LG10G3720 Aethionema arabicum HOM05D005922 ORTHO05D006934 1.9e-95 353.6 380 52.4
Nitab4.5_0001935g0050 Nicotiana tabacum HOM05D005922 ORTHO05D006934 7.1e-95 351.7 416 47.4
SHI04278 Sapria himalayana HOM05D005922 ORTHO05D006934 1.0e-93 347.8 385 49.1
Cpa.g.sc2.132 Carica papaya HOM05D005922 ORTHO05D006934 3.9e-93 345.9 314 57.3
CANSAT78G1412 Cannabis sativa HOM05D005922 ORTHO05D006934 6.6e-93 345.1 377 49.6
ATR0598G299 Amborella trichopoda HOM05D005922 ORTHO05D006934 5.2e-90 335.5 398 46.5
AT1G68080 Arabidopsis thaliana HOM05D005922 ORTHO05D006934 3.6e-83 312.8 321 54.2
SalBow7G4797 Salvia bowleyana HOM05D005922 ORTHO05D006934 8.1e-83 311.6 421 44.9
COL.COLO4_27589 Corchorus olitorius HOM05D005922 ORTHO05D006934 2.5e-76 290.0 339 49.0
Os03g0238700 Oryza sativa ssp. japonica HOM05D005922 ORTHO05D006934 4.8e-75 285.8 298 48.7
Ah.03g138110 Amaranthus hybridus HOM05D005922 ORTHO05D006934 2.4e-74 283.5 381 44.4
BcaC08g45997 Brassica carinata HOM05D005922 ORTHO05D006934 4.5e-73 279.3 323 49.2
Haze_10819 Corylus avellana HOM05D005922 ORTHO05D006934 1.1e-68 264.6 237 59.5
Pp3c27_7680 Physcomitrium patens HOM05D005922 ORTHO05D006934 1.2e-65 254.6 466 35.0
Cfa015069 Carpinus fangiana HOM05D005922 ORTHO05D006934 3.4e-65 253.1 365 41.9
Atru.chr11.736 Acer truncatum HOM05D005922 ORTHO05D006934 4.5e-65 252.7 363 41.3
arahy.Tifrunner.gnm1.ann1.F0VD4J Arachis hypogaea HOM05D005922 ORTHO05D006934 4.5e-65 252.7 367 41.4
Migut.O00731 Erythranthe guttata HOM05D005922 ORTHO05D006934 7.6e-65 251.9 252 51.2
Peaxi162Scf01111g00310 Petunia axillaris HOM05D005922 ORTHO05D006934 3.7e-59 233.0 241 49.4
AagrBONN_evm.TU.Sc2ySwM_117.2043 Anthoceros agrestis HOM05D005922 ORTHO05D006934 2.2e-56 223.8 312 42.9
arahy.Tifrunner.gnm1.ann1.GW2J4P Arachis hypogaea HOM05D006503 ORTHO05D008116 8.4e-56 221.9 243 48.1
Thecc.02G304700 Theobroma cacao HOM05D005922 ORTHO05D006934 1.3e-53 214.5 263 47.1
VMungo0251G2725 Vigna mungo HOM05D005922 ORTHO05D006934 1.3e-51 208.0 233 46.8
CARHR060740 Cardamine hirsuta HOM05D005922 ORTHO05D006934 2.8e-51 206.8 250 48.4
Oeu034664.1 Olea europaea HOM05D005922 ORTHO05D006934 9.0e-50 201.8 109 85.3
Nitab4.5_0001294g0040 Nicotiana tabacum HOM05D005922 ORTHO05D006934 2.1e-46 190.7 164 56.7
SEGI_26303 Sequoiadendron giganteum HOM05D005922 ORTHO05D006934 2.3e-45 187.2 108 76.9
HPP92_016714 Vanilla planifolia HOM05D005922 ORTHO05D006934 2.2e-40 170.6 256 41.4
Manes.18G025338 Manihot esculenta HOM05D005922 ORTHO05D006934 2.1e-38 164.1 90 82.2
arahy.Tifrunner.gnm1.ann1.P482X0 Arachis hypogaea HOM05D005922 ORTHO05D006934 2.7e-38 163.7 102 71.6
Oeu031680.1 Olea europaea HOM05D005922 ORTHO05D006934 6.7e-37 159.1 138 58.7
arahy.Tifrunner.gnm1.ann1.05ZMZX Arachis hypogaea HOM05D005922 ORTHO05D006934 8.8e-37 158.7 142 57.0
Mapoly0075s0019 Marchantia polymorpha HOM05D005922 ORTHO05D006934 5.9e-33 146.0 272 35.3
Nitab4.5_0001294g0050 Nicotiana tabacum HOM05D005922 ORTHO05D006934 3.9e-29 133.3 150 49.3
Cre12.g486551 Chlamydomonas reinhardtii HOM05D005922 ORTHO05D006934 3.3e-28 130.2 224 36.2
Zm00001eb399130 Zea mays HOM05D005922 ORTHO05D006934 7.4e-28 129.0 84 61.9
BcaB02g11286 Brassica carinata HOM05D005922 ORTHO05D006934 5.3e-26 122.9 106 58.5
BcaB05g23450 Brassica carinata HOM05D005922 ORTHO05D006934 7.0e-26 122.5 112 55.4
CBR_g16882 Chara braunii HOM05D005922 ORTHO05D006934 5.9e-25 119.4 119 48.7
VMungo0251G3333 Vigna mungo HOM05D005922 ORTHO05D006934 4.7e-22 109.8 102 52.9
arahy.Tifrunner.gnm1.ann1.B3UXS8 Arachis hypogaea HOM05D005922 ORTHO05D006934 8.8e-21 105.5 69 69.6
Haze_10820 Corylus avellana HOM05D005922 ORTHO05D006934 1.0e-16 92.0 90 55.6
CDE11G0599 Ceratophyllum demersum HOM05D005922 ORTHO05D006934 5.0e-16 89.7 93 48.4
arahy.Tifrunner.gnm1.ann1.10JCRR Arachis hypogaea HOM05D000690 ORTHO05D006934 1.1e-15 88.6 50 74.0
Manes.17G089020 Manihot esculenta HOM05D005922 ORTHO05D006934 7.5e-12 75.9 79 51.9
PRCOL_00005504 Prasinoderma coloniale HOM05D005922 ORTHO05D006934 1.7e-11 74.7 209 29.2
A02p14700 Brassica napus HOM05D005922 ORTHO05D006934 1.8e-10 71.2 181 30.4
BraA02t06537Z Brassica rapa HOM05D005922 ORTHO05D006934 1.8e-10 71.2 181 30.4
SEGI_24854 Sequoiadendron giganteum HOM05D005922 ORTHO05D006934 1.8e-10 71.2 226 28.8
arahy.Tifrunner.gnm1.ann1.62WV2A Arachis hypogaea HOM05D005922 ORTHO05D006934 3.3e-07 60.5 77 42.9
arahy.Tifrunner.gnm1.ann1.QG6U7W Arachis hypogaea HOM05D005922 ORTHO05D006934 3.3e-07 60.5 77 42.9
Zm00001eb371330 Zea mays HOM05D005922 ORTHO05D006934 9.5e-07 58.9 41 56.1
BolC2t08514H Brassica oleracea HOM05D005922 ORTHO05D006934 1.2e-06 58.5 155 30.3


User provided reference genes

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